HHsearch alignment for GI: 254780322 and conserved domain: PRK03522

>PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed.
Probab=97.42  E-value=0.0017  Score=39.66  Aligned_cols=59  Identities=17%  Similarity=0.186  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHHH-HCC-CCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCC
Q ss_conf             999999997898-636-8987099985998589999986269708997200113577531100
Q gi|254780322|r   30 DRVAKEIAFRLN-MIN-QTFENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTLKREVI   90 (273)
Q Consensus        30 ~~~a~~l~~~l~-~~~-~~~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~~~~~~   90 (273)
T Consensus       215 ~~~~~~L~~~~~~~~~~~~~~~vlDlycG~G~~sl~lA~~~--~~V~gvE~~~~av~~A~~na  275 (375)
T PRK03522        215 PAVAAQLYATARDWVRELPPKSMWDLFCGVGGFGLHCATPD--MQLTGIEISAEAIACAKQSA  275 (375)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCC--CEEEEEEECHHHHHHHHHHH
T ss_conf             99999999999998631589789996578538889876417--88999984599999999999