HHsearch alignment for GI: 254780322 and conserved domain: PRK05396

Probab=95.90  E-value=0.12  Score=28.86  Aligned_cols=90  Identities=13%  Similarity=0.193  Sum_probs=59.1

Q ss_pred             CCCCCCEEEECCCC-CHHHHHHHHHCCCCEEEEECCHHHHHHHHHHC-----CCCCHHHH-----CC-CCCCCCHHHHHH
Q ss_conf             68987099985998-58999998626970899720011357753110-----01200110-----14-333522266666
Q gi|254780322|r   44 NQTFENALELHGIT-GIVGYTCMETKKIHRMIRAEISTEFSTLKREV-----ISCPLEEI-----PS-ISQSVDLILSPL  111 (273)
Q Consensus        44 ~~~~~~vLdlGcGt-G~~~~~l~~~~~~~~v~~~D~s~~~~~~~~~~-----~~~d~e~l-----~~-~~~sfDli~s~~  111 (273)
T Consensus       161 ~~~g~~VlV~GaG~vGl~~~~~ak~~Ga~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~~~~~~~~~~t~~~G~Dvvid~~  240 (341)
T PRK05396        161 DLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMS  240 (341)
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECC
T ss_conf             77888699989975432999999984992899994899999989864994999688506899999974899976999878


Q ss_pred             HHHCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             7422234699999999981878708984
Q gi|254780322|r  112 NLHIINDTLEMFSKINHMLKPGGMFLAA  139 (273)
Q Consensus       112 ~l~w~~d~~~~l~~~~r~LkpgG~~~~s  139 (273)
T Consensus       241 G------~~~~~~~~~~~l~~gG~vv~~  262 (341)
T PRK05396        241 G------APSAFRQMLDAMNHGGRIAML  262 (341)
T ss_pred             C------CHHHHHHHHHHHHCCCEEEEE
T ss_conf             9------899999999986359899999