HHsearch alignment for GI: 254780322 and conserved domain: PRK11783

>PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional.
Probab=97.29  E-value=0.00076  Score=41.76  Aligned_cols=68  Identities=16%  Similarity=0.226  Sum_probs=34.4

Q ss_pred             CEEEEECCHHHHHHHHHH------------CCCCCHHHHCC--CCCCCCHHHHHHH----HHCCCCHHHHHHHHHHHHCC
Q ss_conf             089972001135775311------------00120011014--3335222666667----42223469999999998187
Q gi|254780322|r   71 HRMIRAEISTEFSTLKRE------------VISCPLEEIPS--ISQSVDLILSPLN----LHIINDTLEMFSKINHMLKP  132 (273)
Q Consensus        71 ~~v~~~D~s~~~~~~~~~------------~~~~d~e~l~~--~~~sfDli~s~~~----l~w~~d~~~~l~~~~r~Lkp  132 (273)
T Consensus       261 ~~i~G~D~D~~ai~~Ar~Na~~AGv~~~I~f~~~d~~~l~~p~~~~~~Gliv~NPPYGERLge~~~L~~LY~~lG~~lK~  340 (716)
T PRK11783        261 PKFYGSDIDPRVIQAARRNARRAGVEELITFEVKDVADLKNPLPKGPTGLVISNPPYGERLGEEPALIALYSQLGRRLKK  340 (716)
T ss_pred             CCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCCCEEEECCCHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             71899959989999999999981998862999567898579877789828996785220136614689999999999996


Q ss_pred             --CCEEEE
Q ss_conf             --870898
Q gi|254780322|r  133 --GGMFLA  138 (273)
Q Consensus       133 --gG~~~~  138 (273)
T Consensus       341 ~f~GW~~~  348 (716)
T PRK11783        341 QFGGWNAA  348 (716)
T ss_pred             HCCCCEEE
T ss_conf             58998699