HHsearch alignment for GI: 254780322 and conserved domain: pfam00398

Probab=97.56  E-value=0.00014  Score=46.05  Aligned_cols=88  Identities=17%  Similarity=0.229  Sum_probs=56.6

Q ss_pred             HHH-HHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHH---------HCCCCCHHH
Q ss_conf             899-9999999978986368987099985998589999986269708997200113577531---------100120011
Q gi|254780322|r   27 FLL-DRVAKEIAFRLNMINQTFENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTLKR---------EVISCPLEE   96 (273)
Q Consensus        27 ~l~-~~~a~~l~~~l~~~~~~~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~~~---------~~~~~d~e~   96 (273)
T Consensus        12 FL~d~~i~~kIv~~~~-~-~~~d~VlEIGPG~G~LT~~L~~~~--~~v~aiE~D~~l~~~L~~~~~~~~~~~ii~~D~l~   87 (258)
T pfam00398        12 FLTNKKVINRIVDKAN-L-QESDTVLEIGPGKGALTEELAKRA--KQVVAIEIDPRLAKRLQKKLALHPNVEVVHQDFLK   87 (258)
T ss_pred             CCCCHHHHHHHHHHCC-C-CCCCEEEEECCCHHHHHHHHHHCC--CCEEEEECCHHHHHHHHHHHCCCCCEEEEECCHHC
T ss_conf             1389999999999708-9-999979997996239999999616--94799954477999999864428977999663010


Q ss_pred             HCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             0143335222666667422234
Q gi|254780322|r   97 IPSISQSVDLILSPLNLHIIND  118 (273)
Q Consensus        97 l~~~~~sfDli~s~~~l~w~~d  118 (273)
T Consensus        88 ~d~~~~~~~~vvgNLPY~Iss~  109 (258)
T pfam00398        88 FSFPKHEPFLVVGNIPYNITTP  109 (258)
T ss_pred             CCCCCCCCEEEEECCCCCCCHH
T ss_conf             5754578616894488634178