HHsearch alignment for GI: 254780322 and conserved domain: pfam03269

Probab=96.21  E-value=0.0099  Score=35.24  Aligned_cols=100  Identities=15%  Similarity=0.190  Sum_probs=66.6

Q ss_pred             CCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHH-HHHC----CCCC-HHHHCCCCCCCCHHHHHHHHHCC----
Q ss_conf             870999859985899999862697089972001135775-3110----0120-01101433352226666674222----
Q gi|254780322|r   47 FENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTL-KREV----ISCP-LEEIPSISQSVDLILSPLNLHII----  116 (273)
Q Consensus        47 ~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~-~~~~----~~~d-~e~l~~~~~sfDli~s~~~l~w~----  116 (273)
T Consensus         2 gk~glVvGS~~PWvE~~aL~~GA-~~vlTvEYn~l~i~~~~~~rlssi~p~ef~~~~~~~~~~FD~a~SfSSiEH~GLGR   80 (177)
T pfam03269         2 GKSGVVIGSMQPWVEVSALQNGA-SKILTVEYNKLTIQEEFRDRLSSILPTDFAKNFKKYAESFDFAASFSSIEHSGLGR   80 (177)
T ss_pred             CCEEEEECCCCHHHHHHHHHCCC-CCEEEEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEECCCCC
T ss_conf             95189984775399999998188-73489972355566133210011568899999875235323899961244405655


Q ss_pred             -CC------HHHHHHHHHHHHCCCCEEEEEECCCCCCH
Q ss_conf             -34------69999999998187870898406867633
Q gi|254780322|r  117 -ND------TLEMFSKINHMLKPGGMFLAAIPGIGTLH  147 (273)
Q Consensus       117 -~d------~~~~l~~~~r~LkpgG~~~~s~~~~~~~~  147 (273)
T Consensus        81 YGDpidp~Gdlk~m~~i~~~Lk~~G~l~l~vPiG~d~v  118 (177)
T pfam03269        81 YGDPIDPIGDLREMLKIKCVLKKGGLLFLGLPLGTDAI  118 (177)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCE
T ss_conf             68977985109999999986178967999953777616