HHsearch alignment for GI: 254780322 and conserved domain: pfam07021
>pfam07021 MetW Methionine biosynthesis protein MetW. This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In Pseudomonas putida, as in gram-positive bacteria and certain fungi, the second and third steps are a direct sulfhydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells.
Probab=99.75 E-value=2.5e-17 Score=120.45 Aligned_cols=138 Identities=16% Similarity=0.122 Sum_probs=103.6
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHH----HCCCCCHHH--HCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 8987099985998589999986269708997200113577531----100120011--0143335222666667422234
Q gi|254780322|r 45 QTFENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTLKR----EVISCPLEE--IPSISQSVDLILSPLNLHIIND 118 (273)
Q Consensus 45 ~~~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~~~----~~~~~d~e~--l~~~~~sfDli~s~~~l~w~~d 118 (273)
T Consensus 12 ~~~srVLDlGCG~G~ll~~L~~~-k~v~~~GvEid~~~v~~a~~kg~~Vi~~D~d~~l~~f~d~sFD~VIls~vLqhl~~ 90 (193)
T pfam07021 12 PPGSRVLDLGCGDGSLLYLLQEE-KQVDGRGIELDAAGVAECVAKGLSVIQGDADKGLEHFPDKSFDYVILSQTLQATRN 90 (193)
T ss_pred CCCCEEEEECCCCCHHHHHHHHC-CCCCEEEECCCHHHHHHHHHCCCCEECCCHHHCHHHCCCCCCCEEEHHHHHHHHCC
T ss_conf 89698998368898999999876-69876983389999999986479545077445974577678037869879987528
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH-HHH-------HCC-CCCCCCCCCCHHHHHHHHHHCCCCCE
Q ss_conf 699999999981878708984068676334778899875-454-------268-66421674599999999985089854
Q gi|254780322|r 119 TLEMFSKINHMLKPGGMFLAAIPGIGTLHELRKALLKAE-TEL-------TGG-ASPRVIPFMDIKSAGTLMEKSGFISP 189 (273)
Q Consensus 119 ~~~~l~~~~r~LkpgG~~~~s~~~~~~~~el~~~~~~a~-~~~-------~~~-~~~~~~~~~~~~~~~~ll~~agf~~~ 189 (273)
T Consensus 91 P~~vL~EmlRV---gk~~IVSfPN---f~hw~~R~~ll~~GrmPvt~~lp~~WydTpn-ih~~Ti~DFe~lc~~~~i~I~ 163 (193)
T pfam07021 91 PREVLDELLRI---GRRAIVSFPN---FGHWRVRWSLLSRGRMPVTDLLPYTWYDTPN-IHFCTIRDFEELCEELNLKVE 163 (193)
T ss_pred CHHHHHHHHHH---CCEEEEEECC---HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHCCCEEE
T ss_conf 19999998512---6869999436---1479999999947875558999976148998-474459999999998899899
Q ss_pred E
Q ss_conf 6
Q gi|254780322|r 190 I 190 (273)
Q Consensus 190 ~ 190 (273)
T Consensus 164 ~ 164 (193)
T pfam07021 164 D 164 (193)
T ss_pred E
T ss_conf 9