HHsearch alignment for GI: 254780322 and conserved domain: smart00650
>smart00650 rADc Ribosomal RNA adenine dimethylases.
Probab=97.70 E-value=3.4e-05 Score=49.63 Aligned_cols=65 Identities=17% Similarity=0.113 Sum_probs=44.3
Q ss_pred CCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHH---------HCCCCCHHHHCCCCCCCCHHHHHHH
Q ss_conf 987099985998589999986269708997200113577531---------1001200110143335222666667
Q gi|254780322|r 46 TFENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTLKR---------EVISCPLEEIPSISQSVDLILSPLN 112 (273)
Q Consensus 46 ~~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~~~---------~~~~~d~e~l~~~~~sfDli~s~~~ 112 (273)
T Consensus 13 ~~d~VlEIGPG~G~LT~~Ll~~~--~~v~aiE~D~~l~~~L~~~~~~~~n~~ii~~D~L~~~~~~~~~~~iv~NLP 86 (169)
T smart00650 13 PGDTVLEIGPGKGALTEELLERA--ARVTAIEIDPRLAPRLREKFAAADNLTVIHGDALKFDLPKLQPYKVVGNLP 86 (169)
T ss_pred CCCEEEEECCCHHHHHHHHHHHC--CCCCEEECCHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCCCCCEEEECCC
T ss_conf 94979996897029999999731--635316378899999998641079779995711125531158736993476