HHsearch alignment for GI: 254780323 and conserved domain: COG2223

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism].
Probab=97.36  E-value=0.017  Score=37.41  Aligned_cols=384  Identities=13%  Similarity=0.065  Sum_probs=180.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf             112327999999999999999999998778865124--85446799999999999--99999999999633899999999
Q gi|254780323|r   23 MSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHM--GAEIISFVKLWCVFPSA--ILFTILYMKLSNILETEKLFYVV   98 (491)
Q Consensus        23 ~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~--g~e~lp~l~~~~~l~~s--~~~~~~y~~l~~~~~~~~l~~~~   98 (491)
T Consensus         9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll---~aiPil~GallRl~~g~l~drfGgR~~~~~s   85 (417)
T COG2223           9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLL---VAIPILVGALLRLPYGFLTDRFGGRKWTILS   85 (417)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH---HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf             4400579999999999999999999998865412148898889999---9999987478998777534012843799999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
Q ss_conf             9999999999999984210014652345555310101344578765557999999999999-----99999999999998
Q gi|254780323|r   99 VSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELW-----GAVMINLMFWQFAN  173 (491)
Q Consensus        99 ~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~-----~~~vis~~FW~~~n  173 (491)
T Consensus        86 ~~l~~IP~~~~~~a~-------------------------------~~~~~~~-ll~~gll~G~~GasFav~m---~~~s  130 (417)
T COG2223          86 MLLLLIPCLGLAFAV-------------------------------TYPSTWQ-LLVIGLLLGLAGASFAVGM---PNAS  130 (417)
T ss_pred             HHHHHHHHHHHHHHC-------------------------------CCCCHHH-HHHHHHHHHCCCCEEHCCC---CCCC
T ss_conf             999999999999971-------------------------------2875689-9999999701663000025---4421


Q ss_pred             HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             64098998999999998999999998899999963012322489999999999999999999998402452233200001
Q gi|254780323|r  174 RITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGS  253 (491)
Q Consensus       174 ~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  253 (491)
T Consensus       131 ~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~-l~v~~v~~~~~~---~d~p~~----r~  201 (417)
T COG2223         131 FFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVA-LAIAAVLAWLGM---NDVPEH----RA  201 (417)
T ss_pred             CCCCHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH---CCCHHH----HC
T ss_conf             1188544418988760-55301999999889999997258999999999999-999999999984---768665----23


Q ss_pred             CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             12345788899999983096799999999999999999999999999983299899999999999999999999999978
Q gi|254780323|r  254 VKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGS  333 (491)
Q Consensus       254 ~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~  333 (491)
T Consensus       202 ~~~~~~~---~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~---g~l~Rp~GG  275 (417)
T COG2223         202 SVKPQLP---AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLI---GALARPLGG  275 (417)
T ss_pred             CCCCCCH---HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH---HHHHHHCCC
T ss_conf             5553200---5778886382069999999999999999999999999986498723188999987889---999985044


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
Q ss_conf             99997316789999999999999999999841012346667873002079999999999999998763446466877752
Q gi|254780323|r  334 NILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFI  413 (491)
Q Consensus       334 ~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~  413 (491)
T Consensus       276 ~LsDR~Gg~rv~~~~f~~~~~~~~~l---~~~~~~~~~-------~~~~~~~~~~~l~l~~~~--------G~GnGsvfk  337 (417)
T COG2223         276 WLSDRIGGRRVTLAVFVGMALAAALL---SLFLTGFGH-------GGSFVVFVAVFLALFVFA--------GLGNGSVFK  337 (417)
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHH---HCCCCCCCC-------CCCHHHHHHHHHHHHHHH--------CCCCCHHEE
T ss_conf             44331353447999999999999999---705634466-------764399999999999991--------567630033


Q ss_pred             ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             26976736577767888764667779999999999830000233379999999999999999999
Q gi|254780323|r  414 PLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVN  478 (491)
Q Consensus       414 pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~~~  478 (491)
T Consensus       338 ~Ip~if~~~-~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y  401 (417)
T COG2223         338 MIPVIFPKE-TGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY  401 (417)
T ss_pred             ECHHHHHHH-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             131877866-4678879988542566540489999998426379999999999999999999999