HHsearch alignment for GI: 254780323 and conserved domain: PRK03893
>PRK03893 putative sialic acid transporter; Provisional.
Probab=98.85 E-value=2.6e-05 Score=59.69 Aligned_cols=373 Identities=10% Similarity=0.009 Sum_probs=179.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 878112327999999999999999999998778865124-8544679999999999999999999999633899999999
Q gi|254780323|r 20 AVKMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHM-GAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVV 98 (491)
Q Consensus 20 ~i~~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~-g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~ 98 (491)
T Consensus 6 ~lsr~qw~i~~~~~lg~~~d~~D~~~~~~~~p~i~~~~~ls~~~~g~~~s-~~~~g~~iGa~~~G~laDr~GRr~~~~~~ 84 (486)
T PRK03893 6 HLNRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLIS-AAFISRWFGGLLLGAMGDRYGRRLAMVIS 84 (486)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 79999999999999999999999999999999999885979889999999-99999999999999999984569999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 99999999999999842100146523455553101013445787655579999999999999999999999999864098
Q gi|254780323|r 99 VSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKT 178 (491)
Q Consensus 99 ~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~ 178 (491)
T Consensus 85 ~~~~~~~~~~~a~a~---------~~----------------------~~l~~~R~l~G~g~Gg~~~~-~~~~~~E~~P~ 132 (486)
T PRK03893 85 IVLFSAGTLACGFAP---------GY----------------------TTMFIARLVIGMGMAGEYGS-SATYVIESWPK 132 (486)
T ss_pred HHHHHHHHHHHHHHC---------CH----------------------HHHHHHHHHHHCCCCCCHHH-HHHHHHHHCCH
T ss_conf 999999999999828---------89----------------------99999999974226120248-99999987756
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC----
Q ss_conf 9989999999989999999988999999630123224899999999999999999999984024522332000011----
Q gi|254780323|r 179 EEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSV---- 254 (491)
Q Consensus 179 ~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---- 254 (491)
T Consensus 133 ~~Rg~~~~~~~~g~~~G~~la~~~~~~~~~~~g---WR~~f~i----G~lP~ll~l~lr~~LPESprwl~~~~~~~~~~~ 205 (486)
T PRK03893 133 HLRNKASGFLISGFSIGAVLAAQVYSLVVPVWG---WRALFFI----GILPIIFALWLRKNLPEAEDWKEKHAGKAPVRT 205 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---HHHHHHH----HHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHH
T ss_conf 047999999999999999999999999811535---6999999----999999999999809998789987652315778
Q ss_pred -------CCCCC----------CCHHHHHHHHHC-------------------------CHHHHHHHHHHHHHHHHHHHH
Q ss_conf -------23457----------888999999830-------------------------967999999999999999999
Q gi|254780323|r 255 -------KKKLK----------LSVLESLRMALN-------------------------SKYLGYLVLLVICYGTAINLV 292 (491)
Q Consensus 255 -------~~~~~----------~~~~~~~k~i~~-------------------------s~yL~~l~~~v~~~~~~~tl~ 292 (491)
T Consensus 206 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~--~~~fl~ 283 (486)
T PRK03893 206 MVDILYRGEHRILNIVLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVV--LFAFLY 283 (486)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH
T ss_conf 999985134421024553200035666520223420468889998889999999873135789999999999--999999
Q ss_pred HH---HHH-HHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99---999-999-9832998999999999999999999999999789999731678999999999999999999984101
Q gi|254780323|r 293 EG---PWK-EKV-RQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFFVFVIFED 367 (491)
Q Consensus 293 e~---~~k-~~~-~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~ 367 (491)
T Consensus 284 ~w~~~~~lPt~L~~~~g~~~~~~~~~----~~~~~lg~~vG~l~~g~L~DriGrr~~~~~~~l~~~~~~~~l~~~---~~ 356 (486)
T PRK03893 284 SWPIQALLPTYLKTDLGYDPHTVANV----LFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAI---GG 356 (486)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH---CC
T ss_conf 98899999999997518888899999----999999999999999999989485899999999999999999997---56
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 23466678730020799999999999999987634464668777522697673657776788876466777999999999
Q gi|254780323|r 368 ALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIF 447 (491)
Q Consensus 368 ~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~ 447 (491)
T Consensus 357 ------------~~~~-~l~---~l~f~~~~~~~G~~~~~~~y~~E~yPT~vRaTG~G~a~~vG-RlG~ii~P~i~g~L~ 419 (486)
T PRK03893 357 ------------ANVW-VLG---LLLFFQQMLGQGIAGLLPKLIGGYFDTEQRAAGLGFTYNVG-ALGGALAPILGALIA 419 (486)
T ss_pred ------------CHHH-HHH---HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_conf ------------4699-999---99999999999999999999887488969889999999999-999999999999998
Q ss_pred HHHHCCHHHHH
Q ss_conf 98300002333
Q gi|254780323|r 448 MLFPMATFSSI 458 (491)
Q Consensus 448 ~~~~~~~~~~~ 458 (491)
T Consensus 420 ~~~~lg~~~~~ 430 (486)
T PRK03893 420 QRLGLGTALGS 430 (486)
T ss_pred HCCCCHHHHHH
T ss_conf 70895189999