HHsearch alignment for GI: 254780323 and conserved domain: PRK09528
>PRK09528 lacY galactoside permease; Reviewed.
Probab=99.49 E-value=3.3e-08 Score=82.54 Aligned_cols=391 Identities=11% Similarity=0.135 Sum_probs=202.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 3279999999999999999999987788651--24854467999999999999999999999963389999999999999
Q gi|254780323|r 26 AKKFIPMTLMMFLVLFNFSTLRPIKDSLVVP--HMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFV 103 (491)
Q Consensus 26 ~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~--~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~ 103 (491)
T Consensus 7 ~~~y~~~s~~yf~yF~~~g~~~pf~~vwL~~~~Gls~~qIGli~s-~~~~~~l~~~p~~G~lsDk~g~~k~ll~~~~~~~ 85 (418)
T PRK09528 7 NPNYWLFSLFFFFFFFIWSSYFSFFPIWLHDINGLSKTDTGIIFS-AISLFALLFQPLYGVISDKLGLKKYLLWIISGLL 85 (418)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 832999999999999999999999999967678989999999999-9999999998889997420241278999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHCCHHH
Q ss_conf 9999999998421001465234555531010134457876555799999999999999999999999---9986409899
Q gi|254780323|r 104 SFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQ---FANRITKTEE 180 (491)
Q Consensus 104 ~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~---~~n~~f~~~q 180 (491)
T Consensus 86 ~~~~~~f~~vf--~---------------------p-ll~~~~~lg~-------~~~~i~~~~-~~~a~~pl~ds~~~~~ 133 (418)
T PRK09528 86 VLFGPFFIYVF--A---------------------P-LLQYNILVGA-------IVGGIYLGF-GFNAGAGAIEAYIEKV 133 (418)
T ss_pred HHHHHHHHHHH--H---------------------H-HHHHHHHHHH-------HHHHHHHHH-HHCCCCCHHHHHHHHH
T ss_conf 99999999999--9---------------------9-9999999999-------999999999-8734663899999999
Q ss_pred HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 899---99999989999999988999999630123224899999999999999999999984024522332000011234
Q gi|254780323|r 181 ATR---FYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKK 257 (491)
Q Consensus 181 aKR---lf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (491)
T Consensus 134 s~~~~~~YG~iRlwGSiGfavas~~~G~l~~~~~~~~f~~~s~----~~li~~~ll~~---~~~~~~~~~~~~~~~~~~~ 206 (418)
T PRK09528 134 SRNSGFEYGRARMFGSLGWALCAFFAGILFNINPQINFWLGSG----CALILAVLLFF---AKPDAPSTATVANAVGANP 206 (418)
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH----HHHHHHHHHHH---HCCCCCCCCCCCCCCCCCC
T ss_conf 8775897624789999999999999889876173289999999----99999999998---4676532210000001466
Q ss_pred CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 57888999999830967999999999999999999999999999832998999999999999999999999999789999
Q gi|254780323|r 258 LKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILK 337 (491)
Q Consensus 258 ~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~ 337 (491)
T Consensus 207 ~~~~~~~~~-~llk~~~~~~f~l~~~~~~~~~~~~d~~f~~f~~~~~~~~~~g~~~~G~l~s~gv~~Ei~~m~~~~~l~~ 285 (418)
T PRK09528 207 SAVSLKDAL-ALFKLPKFWFLVLYVIGVACIYDVFDQQFPNFFASFFATHEQGTRVFGYLNSFQVFLEALIMFFAPLIIN 285 (418)
T ss_pred CCCCHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 887799999-9836749999999999999999999988889999997701667136769999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHEECC
Q ss_conf 7316789999999999999999999841012346667873002079999999999999998763446-466877752269
Q gi|254780323|r 338 SFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMF-DSTKEMAFIPLD 416 (491)
Q Consensus 338 r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~-~p~~E~l~~pl~ 416 (491)
T Consensus 286 r~g~k~~Llla~~~~~lR---w~~~~~~~~~~---------------~i---~~~ql-LHa~tf~l~~~a~~~yI~~~~~ 343 (418)
T PRK09528 286 RIGAKNALLLAGTIMAVR---IIGSAFATNAL---------------EV---SILKL-LHAFEVPFLLVGIFKYITSNFD 343 (418)
T ss_pred HCCHHHHHHHHHHHHHHH---HHHHHHCCCHH---------------HH---HHHHH-HHHHHHHHHHHHHHHHHHHHCC
T ss_conf 608099999999999999---99863001389---------------99---99999-9999999999999999998588
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 767365777678887646677799999999998300002333799999999999999999999708999
Q gi|254780323|r 417 DEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVNQLSKEYT 485 (491)
Q Consensus 417 ~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~~~~L~~~y~ 485 (491)
T Consensus 344 ~~l~aT~~~v~~~~~~gl~~~i~s~~~G~lyD~~G~---~~~y~~~g~i---~~~~tlis~f~l~~~~~ 406 (418)
T PRK09528 344 VRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGF---QDTYLVLGLI---VLGFTLISAFTLSGKRP 406 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH---HHHHHHHHHHHHCCCCC
T ss_conf 888999999999999999999974206889998445---7999999999---99999999997357886