HHsearch alignment for GI: 254780323 and conserved domain: PRK09528

>PRK09528 lacY galactoside permease; Reviewed.
Probab=99.49  E-value=3.3e-08  Score=82.54  Aligned_cols=391  Identities=11%  Similarity=0.135  Sum_probs=202.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf             3279999999999999999999987788651--24854467999999999999999999999963389999999999999
Q gi|254780323|r   26 AKKFIPMTLMMFLVLFNFSTLRPIKDSLVVP--HMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFV  103 (491)
Q Consensus        26 ~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~--~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~  103 (491)
T Consensus         7 ~~~y~~~s~~yf~yF~~~g~~~pf~~vwL~~~~Gls~~qIGli~s-~~~~~~l~~~p~~G~lsDk~g~~k~ll~~~~~~~   85 (418)
T PRK09528          7 NPNYWLFSLFFFFFFFIWSSYFSFFPIWLHDINGLSKTDTGIIFS-AISLFALLFQPLYGVISDKLGLKKYLLWIISGLL   85 (418)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf             832999999999999999999999999967678989999999999-9999999998889997420241278999999999


Q ss_pred             HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHCCHHH
Q ss_conf             9999999998421001465234555531010134457876555799999999999999999999999---9986409899
Q gi|254780323|r  104 SFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQ---FANRITKTEE  180 (491)
Q Consensus       104 ~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~---~~n~~f~~~q  180 (491)
T Consensus        86 ~~~~~~f~~vf--~---------------------p-ll~~~~~lg~-------~~~~i~~~~-~~~a~~pl~ds~~~~~  133 (418)
T PRK09528         86 VLFGPFFIYVF--A---------------------P-LLQYNILVGA-------IVGGIYLGF-GFNAGAGAIEAYIEKV  133 (418)
T ss_pred             HHHHHHHHHHH--H---------------------H-HHHHHHHHHH-------HHHHHHHHH-HHCCCCCHHHHHHHHH
T ss_conf             99999999999--9---------------------9-9999999999-------999999999-8734663899999999


Q ss_pred             HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             899---99999989999999988999999630123224899999999999999999999984024522332000011234
Q gi|254780323|r  181 ATR---FYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKK  257 (491)
Q Consensus       181 aKR---lf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  257 (491)
T Consensus       134 s~~~~~~YG~iRlwGSiGfavas~~~G~l~~~~~~~~f~~~s~----~~li~~~ll~~---~~~~~~~~~~~~~~~~~~~  206 (418)
T PRK09528        134 SRNSGFEYGRARMFGSLGWALCAFFAGILFNINPQINFWLGSG----CALILAVLLFF---AKPDAPSTATVANAVGANP  206 (418)
T ss_pred             HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH----HHHHHHHHHHH---HCCCCCCCCCCCCCCCCCC
T ss_conf             8775897624789999999999999889876173289999999----99999999998---4676532210000001466


Q ss_pred             CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             57888999999830967999999999999999999999999999832998999999999999999999999999789999
Q gi|254780323|r  258 LKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILK  337 (491)
Q Consensus       258 ~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~  337 (491)
T Consensus       207 ~~~~~~~~~-~llk~~~~~~f~l~~~~~~~~~~~~d~~f~~f~~~~~~~~~~g~~~~G~l~s~gv~~Ei~~m~~~~~l~~  285 (418)
T PRK09528        207 SAVSLKDAL-ALFKLPKFWFLVLYVIGVACIYDVFDQQFPNFFASFFATHEQGTRVFGYLNSFQVFLEALIMFFAPLIIN  285 (418)
T ss_pred             CCCCHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             887799999-9836749999999999999999999988889999997701667136769999999999999999999998


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHEECC
Q ss_conf             7316789999999999999999999841012346667873002079999999999999998763446-466877752269
Q gi|254780323|r  338 SFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMF-DSTKEMAFIPLD  416 (491)
Q Consensus       338 r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~-~p~~E~l~~pl~  416 (491)
T Consensus       286 r~g~k~~Llla~~~~~lR---w~~~~~~~~~~---------------~i---~~~ql-LHa~tf~l~~~a~~~yI~~~~~  343 (418)
T PRK09528        286 RIGAKNALLLAGTIMAVR---IIGSAFATNAL---------------EV---SILKL-LHAFEVPFLLVGIFKYITSNFD  343 (418)
T ss_pred             HCCHHHHHHHHHHHHHHH---HHHHHHCCCHH---------------HH---HHHHH-HHHHHHHHHHHHHHHHHHHHCC
T ss_conf             608099999999999999---99863001389---------------99---99999-9999999999999999998588


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             767365777678887646677799999999998300002333799999999999999999999708999
Q gi|254780323|r  417 DEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVNQLSKEYT  485 (491)
Q Consensus       417 ~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~~~~L~~~y~  485 (491)
T Consensus       344 ~~l~aT~~~v~~~~~~gl~~~i~s~~~G~lyD~~G~---~~~y~~~g~i---~~~~tlis~f~l~~~~~  406 (418)
T PRK09528        344 VRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGF---QDTYLVLGLI---VLGFTLISAFTLSGKRP  406 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH---HHHHHHHHHHHHCCCCC
T ss_conf             888999999999999999999974206889998445---7999999999---99999999997357886