HHsearch alignment for GI: 254780323 and conserved domain: PRK09874
>PRK09874 drug efflux system protein MdtG; Provisional.
Probab=97.12 E-value=0.03 Score=35.54 Aligned_cols=135 Identities=10% Similarity=0.098 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 89989999999989999999988999999630123224899999999999999999999984024522332000011234
Q gi|254780323|r 178 TEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKK 257 (491)
Q Consensus 178 ~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (491)
T Consensus 251 ~~~~~~~~g~~~~~~gi~~~l~~~~~G~l~dr~g~~~~~~~~~--~~~~~~l~~l~------------------------ 304 (406)
T PRK09874 251 VSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITAL--IISVLLLIPMS------------------------ 304 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH--HHHHHHHHHHH------------------------
T ss_conf 4449999999999999999999999999998738399999999--99999999999------------------------
Q ss_pred CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 57888999999830967999999999999999999999999999832998999999999999999999999999789999
Q gi|254780323|r 258 LKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILK 337 (491)
Q Consensus 258 ~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~ 337 (491)
T Consensus 305 -----------~~~~~~~l~i~--~~l~G~g~g~~~P~~~~~~~~~~-~~~~~G~~~g~~~~~~~lG~~~GPll~G~l~~ 370 (406)
T PRK09874 305 -----------FVQTPLQLGIL--RFLLGAADGALLPAVQTLLVYNS-SNQIAGRIFSYNQSFRDIGNVTGPLMGAAISA 370 (406)
T ss_pred -----------HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -----------99759999999--99999999999999999998758-88477799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 731678999999999
Q gi|254780323|r 338 SFRWFTSAIITPLMI 352 (491)
Q Consensus 338 r~G~~~~l~i~Pi~~ 352 (491)
T Consensus 371 ~~G~~~~f~i~a~~~ 385 (406)
T PRK09874 371 NYGFRAVFLVTAGVV 385 (406)
T ss_pred HCCHHHHHHHHHHHH
T ss_conf 748599999999999