HHsearch alignment for GI: 254780323 and conserved domain: PRK10473
>PRK10473 multidrug efflux system protein MdtL; Provisional.
Probab=98.93 E-value=1.5e-05 Score=61.50 Aligned_cols=276 Identities=7% Similarity=-0.014 Sum_probs=138.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999877886512-48544679999999999999999999999633899999999999999999999
Q gi|254780323|r 32 MTLMMFLVLFNFSTLRPIKDSLVVPH-MGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFA 110 (491)
Q Consensus 32 ~~~~~F~i~~~y~~lr~~rd~l~~~~-~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~ 110 (491)
T Consensus 8 ~~~l~~l~plaiD~ylPalP~i~~~f~~s~~~~qltis-~f~~g~a~~ql~~GplsD~~GRr~vll~gl~l~~i~s~~~~ 86 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFS-VYLAGMAAAMLFAGKIADRSGRKPVAIPGALLFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998899999996199999997979999999999-99999999999989999984883999999999999999999
Q ss_pred HHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 99842100146523455553101013445787655579999999999999999999999999864098998999999998
Q gi|254780323|r 111 FLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATFGL 190 (491)
Q Consensus 111 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~ 190 (491)
T Consensus 87 ~a--~~~-----------------------------~~ll~~R~lqG~g~~~~~v-~~~aii~D~~~~~~~~~~~s~~~~ 134 (392)
T PRK10473 87 LA--ETS-----------------------------SLFLAGRFLQGLGAGCCYV-VAFAILRDTLDDRRRAKVLSLLNG 134 (392)
T ss_pred HH--CCH-----------------------------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 86--369-----------------------------9999999999968877999-999999997699999799899999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99999999889999996301232248999999999999999999999840245223320000112345788899999983
Q gi|254780323|r 191 VGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMAL 270 (491)
Q Consensus 191 g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ 270 (491)
T Consensus 135 ~~~~~p~~aP~lGg~l~~~~g---W~~~F~~l~~~~~l~~l~~~---~~lpET----~----~~~~~~~~~~~~~~~~~l 200 (392)
T PRK10473 135 ITCIIPVLAPVLGHLIMLKFP---WQSLFYTMAAMGIAVLLLSL---FILKET----R----PARAPAASSKPRENSESL 200 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHH---HHCCCC----C----CCCCCCHHHHHHHHHHHH
T ss_conf 999988888889999998749---49999999999999999999---968788----9----987664024899999998
Q ss_pred CCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 096799999999-9999999999999999999832998999999999999999999999999789999731678999999
Q gi|254780323|r 271 NSKYLGYLVLLV-ICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITP 349 (491)
Q Consensus 271 ~s~yL~~l~~~v-~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~P 349 (491)
T Consensus 201 ~~r~fl~~~l~~~l~~~~~f~fis~sp~i~~~~~gls~~~----fg~~f~~~~~~~~~gs~l~~~l~~r~g~~~ll~~g~ 276 (392)
T PRK10473 201 LNRFFLSRLVITTLSVSVILTFVNTSPVLLMEQMGFERGE----YAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQ 276 (392)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_conf 0823799999999999999999980799999991898899----999999999999999999999999957999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780323|r 350 LMILITGGG 358 (491)
Q Consensus 350 i~~li~~~~ 358 (491)
T Consensus 277 ~l~l~~~~~ 285 (392)
T PRK10473 277 VLFLAAGIT 285 (392)
T ss_pred HHHHHHHHH
T ss_conf 999999999