HHsearch alignment for GI: 254780323 and conserved domain: PRK10504
>PRK10504 multidrug efflux system protein MdtE; Provisional.
Probab=98.36 E-value=0.00048 Score=49.65 Aligned_cols=153 Identities=12% Similarity=0.121 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 1232799999999999999999999877886512-485446799999999999999999999996338999999999999
Q gi|254780323|r 24 SEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPH-MGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFF 102 (491)
Q Consensus 24 ~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~-~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f 102 (491)
T Consensus 8 ~rW-~l~iv~l~~Fm~~ld~TivnvALP~i~~~l~~s~~~~~Wv~taY~L~-~a~~~p~~G~laDrfG~rrvf~~gl~~F 85 (471)
T PRK10504 8 TRW-QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLT-VAVMLPASGWLADKVGVRNIFFTAIVLF 85 (471)
T ss_pred CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 379-99999999999999997999999999998698873799999999999-9999999999999948779999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 99999999998421001465234555531010134457876555799999999999999999999999998640989989
Q gi|254780323|r 103 VSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEAT 182 (491)
Q Consensus 103 ~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaK 182 (491)
T Consensus 86 ~~gSllca~A--~s~~-----------------------------~Li~~R~lQGiG~a~~~P~-~~~ii~~~~p~~~~~ 133 (471)
T PRK10504 86 TLGSLFCALS--GTLN-----------------------------ELLLARVLQGVGGAMMVPV-GRLTVMKIVPREQYM 133 (471)
T ss_pred HHHHHHHHHH--CCHH-----------------------------HHHHHHHHHHCCCCCCCCH-HHHHHHHCCCHHHHH
T ss_conf 9999999971--7789-----------------------------9999999985276210230-341034237768899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999899999999889999996301
Q gi|254780323|r 183 RFYATFGLVGNVGLIFAGGIVKTFSKLT 210 (491)
Q Consensus 183 Rlf~li~~g~~ig~i~gg~~~~~l~~~~ 210 (491)
T Consensus 134 ~a~g~~~~~~~~g~~lGP~lGG~l~~~~ 161 (471)
T PRK10504 134 AAMTFVTLPGQIGPLLGPALGGLLVEYA 161 (471)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHCCCH
T ss_conf 9999999999999885312100101101