HHsearch alignment for GI: 254780323 and conserved domain: PRK11010
>PRK11010 ampG muropeptide transporter; Validated.
Probab=95.48 E-value=0.22 Score=28.74 Aligned_cols=333 Identities=16% Similarity=0.205 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----HHHHH-HHHH
Q ss_conf 279999999999999999999987788651-2485446799999999999999999999996338-----99999-9999
Q gi|254780323|r 27 KKFIPMTLMMFLVLFNFSTLRPIKDSLVVP-HMGAEIISFVKLWCVFPSAILFTILYMKLSNILE-----TEKLF-YVVV 99 (491)
Q Consensus 27 ~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~-~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~-----~~~l~-~~~~ 99 (491)
T Consensus 12 ~r~~~~llLGFsSGLPl~L~~~tL~~WLr~~Gvsl~tIGlf-slv~lpYslK--FLWAPlvDr~~~P~LGrRRsWill~Q 88 (490)
T PRK11010 12 PRSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAYVFK--FLWSPLMDRYTPPFLGRRRGWLLATQ 88 (490)
T ss_pred CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHH-HHHHHHHHHH--HHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf 27999999998500419999979999998879988999999-9999999999--99887885647877873479999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 99999999999998421001465234555531010134457876555799999999999999999999999998640989
Q gi|254780323|r 100 SFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTE 179 (491)
Q Consensus 100 ~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~ 179 (491)
T Consensus 89 ~~l~~~l~~ma~--------~~P~~--------------------~l~~~a~~allvAf~SATQD-IaiDAyRiE~l~~~ 139 (490)
T PRK11010 89 LLLLVAIAAMGF--------LEPGT--------------------QLRWMAALAVVIAFCSASQD-IVFDAWKTDVLPAE 139 (490)
T ss_pred HHHHHHHHHHHH--------CCHHH--------------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCHH
T ss_conf 999999999997--------59675--------------------79999999999999987789-99989999836861
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 989999999989999999988999999630-1232248999999999999999999999840245223320000112345
Q gi|254780323|r 180 EATRFYATFGLVGNVGLIFAGGIVKTFSKL-TNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKL 258 (491)
Q Consensus 180 qaKRlf~li~~g~~ig~i~gg~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (491)
T Consensus 140 eqg~gaa~~v~GYRigmlvsGa~aL~lAd~~~gW~~~Y~~mA~lml~g~~~t--------l~~pEP~~~~----~~~~~l 207 (490)
T PRK11010 140 ERGAGAAISVLGYRLGMLVSGGLALWLADRWLGWQGMYWLMAALLIPCIIAT--------LLAPEPTDTI----PVPKTL 207 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH--------HHCCCCCCCC----CCHHHH
T ss_conf 3358999999999999999879999998762265999999999999999999--------8388865554----331379
Q ss_pred CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q ss_conf 7888999999830967999999999999999999999999-99983299899999999999999999-999999978999
Q gi|254780323|r 259 KLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKE-KVRQLYPTQNSYAQFMGQFIQWTGIV-TIVFMILGSNIL 336 (491)
Q Consensus 259 ~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~-~~~~~~~~~~~~~af~g~~~~~v~i~-tii~qll~~~ll 336 (491)
T Consensus 208 ~~avv~Pf~~Ff~R~~a~lIL~fI~lYKlgDa~~g~M~~pFyl~dlGFS~~eIa~v~K~~----Gl~atI~G~~lGG~li 283 (490)
T PRK11010 208 EQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTL----GLLATIVGALYGGILM 283 (490)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHH
T ss_conf 999999999999706899999999999967999999866887743288888999888589----9999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 973167899999999999999999998410123466678730---0207999---9999999999998763446466
Q gi|254780323|r 337 KSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIK---LVPLALA---VFLGSLQNVLSKATKYTMFDST 407 (491)
Q Consensus 337 ~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~---~~~l~~~---v~~~~i~~~~~k~~kYsl~~p~ 407 (491)
T Consensus 284 ~R~Gl~raL~i~gilqalsNL~f~~LA~~g~~~~~l~~aI~~Enf~~G~gtaAfvAyLssL~n~~ftATQYALlSSl 360 (490)
T PRK11010 284 QRLSLFRALLIFGILQGASNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSAL 360 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 99729999999999999678999999970884899999999998887899999999999853832259999999999