HHsearch alignment for GI: 254780323 and conserved domain: PRK11102

>PRK11102 bicyclomycin/multidrug efflux system; Provisional.
Probab=99.01  E-value=8.1e-06  Score=63.66  Aligned_cols=253  Identities=11%  Similarity=0.067  Sum_probs=134.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHH
Q ss_conf             85446799999999999999999999996338999999999999999999999984210014652345555310101344
Q gi|254780323|r   59 GAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLK  138 (491)
Q Consensus        59 g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~  138 (491)
T Consensus        24 s~~~~~~~~s~~~l-~~a~~~l~~G~lsD~~GRr~~~~~~~~~~~i~~~~~~~a--~~~~--------------------   80 (377)
T PRK11102         24 SAGSVQMTLSAYIL-GFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA--QTID--------------------   80 (377)
T ss_pred             CHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH--CCHH--------------------
T ss_conf             99899999999999-999999999999998188899999999999999999985--6799--------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf             57876555799999999999999999999999998640989989999999989999999988999999630123224899
Q gi|254780323|r  139 WFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYS  218 (491)
Q Consensus       139 ~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~  218 (491)
T Consensus        81 ---------~l~~~R~lqG~~~~~~~~-~~~a~i~d~~~~~~~~~~~~~~~~~~~~~~~~~p~iGg~l~~~~g---Wr~~  147 (377)
T PRK11102         81 ---------QLIVMRFLQGLAAAAASV-VINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGYLLVWFS---WHSI  147 (377)
T ss_pred             ---------HHHHHHHHHHHCCCCCCH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---HHHH
T ss_conf             ---------999999998653001305-889999970799999998799999999704888887799981356---6899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH-HHHHHHHHHHHHH
Q ss_conf             999999999999999999984024522332000011234578889999998309679999999999-9999999999999
Q gi|254780323|r  219 MLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVIC-YGTAINLVEGPWK  297 (491)
Q Consensus       219 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~-~~~~~tl~e~~~k  297 (491)
T Consensus       148 F~~~~~~~~l~~~l~~---~~lpet---~-~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~f~~~~p-  218 (377)
T PRK11102        148 FWVLALAAILASALVF---FLIPET---L-PPENRQPF-HLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGP-  218 (377)
T ss_pred             HHHHHHHHHHHHHHHH---HHCCCC---C-CCCCCCCC-CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf             9999999999999999---975445---7-84467887-7999999999999586899999999999999999998347-


Q ss_pred             HHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999983-299899999999999999999999999978999973167899999999999999999
Q gi|254780323|r  298 EKVRQL-YPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFF  360 (491)
Q Consensus       298 ~~~~~~-~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff  360 (491)
T Consensus       219 ~~~~~~~gls~~~----~gl~~~~~~~~~~~gs~l~grl~~r~g~~~~~~~gl~i~~~~~~~l~  278 (377)
T PRK11102        219 FVYIEIYGVSPQN----FGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLV  278 (377)
T ss_pred             HHHHHHCCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999982999899----99999999999999999999999995889999999999999999999