HHsearch alignment for GI: 254780323 and conserved domain: PRK11646

>PRK11646 multidrug resistance protein MdtH; Provisional.
Probab=99.56  E-value=9.6e-09  Score=86.77  Aligned_cols=381  Identities=12%  Similarity=0.120  Sum_probs=209.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf             2327999999999999999999998778865124854--46799999999999999999999996338999999999999
Q gi|254780323|r   25 EAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGAE--IISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFF  102 (491)
Q Consensus        25 E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e--~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f  102 (491)
T Consensus         8 ~~~~~w~L~~~~~l~~lG~~mv~Pfl~iyl~~~lg~s~~~iGlil~-~~~l~~~~~~~~~G~LsDR~GrK~vii~gl~~~   86 (400)
T PRK11646          8 RNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALG-LRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMR   86 (400)
T ss_pred             HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             7226799999999999999999999999998607998899999999-999999999861468888618819999999999


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf             99999999998421001465234555531010134457876555799999999999999999999999998640989989
Q gi|254780323|r  103 VSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEAT  182 (491)
Q Consensus       103 ~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaK  182 (491)
T Consensus        87 a~~~~~~a~a~-------------------------------s~~~l~~~~~l~G~g~~~~~p-a~~Aliad~t~~~~R~  134 (400)
T PRK11646         87 AAGFATMGIAH-------------------------------EPWLLWFSCILSGLGGTLFDP-PRSALVIKLIRPQQRG  134 (400)
T ss_pred             HHHHHHHHHHC-------------------------------CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCHHHHH
T ss_conf             99999999973-------------------------------599999999999998564679-9999999708876899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             99999998999999998899999963012322489999999999999999999998402452233200001123457888
Q gi|254780323|r  183 RFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSV  262 (491)
Q Consensus       183 Rlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (491)
T Consensus       135 ~~f~l~~~a~niG~~iGpllGg~l~~~~~~--~~----f~~~a~~~~l~~--~~~~~~~p~~---------~~~~~~~~~  197 (400)
T PRK11646        135 RFFSLLMMQDSAGAVIGALLGSWLLQYDFR--LV----CATGAVLFVLAA--AFNAWLLPAY---------KLSTVRTPV  197 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH----HHHHHHHHHHHH--HHHHHHCCCC---------CCCCCCCCH
T ss_conf             999999999999999999999999986489--99----999999999999--9999957866---------666667636


Q ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q ss_conf             99999983096799999999999999999999999999983299899999999999999999999999-97899997316
Q gi|254780323|r  263 LESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMI-LGSNILKSFRW  341 (491)
Q Consensus       263 ~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~ql-l~~~ll~r~G~  341 (491)
T Consensus       198 ~~~~~~vl~dr~f~~~~l~~~~~~~~~~q~~~~lpl~~~~~~~~~~----~~g~l~~~~~~v~v~lq~pl~~~~~kr~~~  273 (400)
T PRK11646        198 REGMTRVLRDKRFVTYVLTLAGYYMLAVQVMLMLPIMVNDIAGSPS----AVKWMYAIEACLSLTLLYPIARWSEKRFRL  273 (400)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf             7789999726889999999999999999999999999998558789----999999999999999999999999985472


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC-CHHHH
Q ss_conf             78999999999999999999984101234666787300207999999999999999876344646687775226-97673
Q gi|254780323|r  342 FTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPL-DDEFR  420 (491)
Q Consensus       342 ~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl-~~~~R  420 (491)
T Consensus       274 ~~~l~~G---~~l~~~g~~~~~~~~~~~~-----------~~i~~~lf--------tiGe~l~~P~~~s~va~lap~~~r  331 (400)
T PRK11646        274 EHRLMAG---LLIMSLSMFPIGMVSNLQQ-----------LFTLICLF--------YIGSIIAEPARETLSASLADARAR  331 (400)
T ss_pred             HHHHHHH---HHHHHHHHHHHHHHHHHHH-----------HHHHHHHH--------HHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf             9999999---9999999999999988999-----------99999999--------999999975489999983896543


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Q ss_conf             6577767888764667779999999999830000233379999999999----99999999997089
Q gi|254780323|r  421 TKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCL----MFIWIYVVNQLSKE  483 (491)
Q Consensus       421 ~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i----~~~Wi~~~~~L~~~  483 (491)
T Consensus       332 G~y~G~~-~~~~~lG~~~Gp~~gG~L~d~~~~-~~~p~~~W~~~~~~~~l~~~~l~~~~~~~~~~~~  396 (400)
T PRK11646        332 GSYMGFS-RLGLALGGAIGYIGGGWLFDLGKA-LHQPELPWMMLGIIGIITLLALGWQFSQKRIARR  396 (400)
T ss_pred             EHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             2376299-999999999889899999955302-4898579999999999999999999989999865