HHsearch alignment for GI: 254780323 and conserved domain: PRK11646

>PRK11646 multidrug resistance protein MdtH; Provisional.
Probab=97.27  E-value=0.022  Score=36.63  Aligned_cols=253  Identities=13%  Similarity=0.067  Sum_probs=109.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999999877886512485446799999--999999999999999996338999999999999999999
Q gi|254780323|r   31 PMTLMMFLVLFNFSTLRPIKDSLVVPHMGAEIISFVKLW--CVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAI  108 (491)
Q Consensus        31 ~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e~lp~l~~~--~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~  108 (491)
T Consensus       101 ~l~~~~~l~G~g~~~~~pa~~Aliad~t~~~~R~~~f~l~~~a~niG~~iGpllGg~l~~~~~~~~f~~~a~~~~l~~~-  179 (400)
T PRK11646        101 LLWFSCILSGLGGTLFDPPRSALVIKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAA-  179 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf             9999999999985646799999999708876899999999999999999999999999986489999999999999999-


Q ss_pred             HHHHHHHCCCCCCCCH---HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf             9999842100146523---4555531010134457876555799999999999999999999999998640989989999
Q gi|254780323|r  109 FAFLLYPYRDFLHPSP---ESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFY  185 (491)
Q Consensus       109 f~~~l~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf  185 (491)
T Consensus       180 ~~~~~~p~~~~~~~~~~~~~~~~~vl~dr~f~~~~l------~~~~~~~~~~q~-~~~lp----l~~~~~~~~---~~~~  245 (400)
T PRK11646        180 FNAWLLPAYKLSTVRTPVREGMTRVLRDKRFVTYVL------TLAGYYMLAVQV-MLMLP----IMVNDIAGS---PSAV  245 (400)
T ss_pred             HHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH------HHHHHHHHHHHH-HHHHH----HHHHHHCCC---HHHH
T ss_conf             999957866666667636778999972688999999------999999999999-99999----999985587---8999


Q ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             999989-9999999889999996301232248999999999999999999999840245223320000112345788899
Q gi|254780323|r  186 ATFGLV-GNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLE  264 (491)
Q Consensus       186 ~li~~g-~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (491)
T Consensus       246 g~l~~~~~~v~v~lq~pl~~~~~kr~~~~~~l~~G~~l~~~g~~~~----------------------------------  291 (400)
T PRK11646        246 KWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPI----------------------------------  291 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH----------------------------------
T ss_conf             9999999999999999999999985472999999999999999999----------------------------------


Q ss_pred             HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99998309679999999999999999999999999998329989999999999999999999999997899997
Q gi|254780323|r  265 SLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKS  338 (491)
Q Consensus       265 ~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r  338 (491)
T Consensus       292 ---~~~~~--~~~~~i~~~lftiGe~l~~P~~~s~va~la-p~~~rG~y~G~~~~~~~lG~~~Gp~~gG~L~d~  359 (400)
T PRK11646        292 ---GMVSN--LQQLFTLICLFYIGSIIAEPARETLSASLA-DARARGSYMGFSRLGLALGGAIGYIGGGWLFDL  359 (400)
T ss_pred             ---HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             ---99988--999999999999999999754899999838-965432376299999999999889899999955