HHsearch alignment for GI: 254780323 and conserved domain: PRK11902

>PRK11902 ampG muropeptide transporter; Reviewed.
Probab=96.29  E-value=0.1  Score=31.23  Aligned_cols=275  Identities=12%  Similarity=0.091  Sum_probs=124.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHH
Q ss_conf             79999999999999999999987788651248544679999---99999999999999999963-389999999999999
Q gi|254780323|r   28 KFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGAEIISFVKL---WCVFPSAILFTILYMKLSNI-LETEKLFYVVVSFFV  103 (491)
Q Consensus        28 ~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e~lp~l~~---~~~l~~s~~~~~~y~~l~~~-~~~~~l~~~~~~~f~  103 (491)
T Consensus        93 ~~~~l~~~~~l~af~sAtqDIA~Da~~ie~l~~~e~g~~n~~~v~Gyr~g~ligGg~~l~l~~~~~gW~~~~~~la~l~l  172 (402)
T PRK11902         93 ALWPLALLAVLVAFLSASQDIVFDAYSTDVLRPEERGAGAAVKVLGYRLAMLVSGGLALILADRVLGWGNTYLLMAGLML  172 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             79999999999999999999999899998559988999999999999999999899999999988869999999999999


Q ss_pred             HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCHH
Q ss_conf             9999999998421001465234555531010134457876---55579999999999999999999999999-8640989
Q gi|254780323|r  104 SFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYL---AGKWSFALFYVFAELWGAVMINLMFWQFA-NRITKTE  179 (491)
Q Consensus       104 ~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~w~~~~fYv~~e~~~~~vis~~FW~~~-n~~f~~~  179 (491)
T Consensus       173 l~~--~~~l~~~e~~~~~~~~~~~~~--~~~~~~~~f~~r~~~~~~l~fillyrlgd~~~~~m~~-pFl--l~dlG~s~~  245 (402)
T PRK11902        173 AGA--LTTLWAPEPEVPARAPRSLGE--AVVGPLRDFFSRRGAWWLLLLIVLYKLGDAFAGSLST-TFL--IRGAGFSAG  245 (402)
T ss_pred             HHH--HHHHHCCCCCCCCCCCHHHHH--HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH-HHH--HHHCCCCHH
T ss_conf             999--999928887754424103789--9999999999726799999999999989999999878-999--975299999


Q ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             98999999998999-99999889999996301232248999999999999999999999840245223320000112345
Q gi|254780323|r  180 EATRFYATFGLVGN-VGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKL  258 (491)
Q Consensus       180 qaKRlf~li~~g~~-ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (491)
T Consensus       246 ~ig~~~~~~G~~a~i~G~~lGG~l~~r~g~----~~~L~~~~~~~---~l~~l~~~~la~~-------------------  299 (402)
T PRK11902        246 EVGIVNKTLGLAATIVGALAGGSLMVRLGL----YRSLMLFGVLQ---AVSNLGYWLLAVT-------------------  299 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH---HHHHHHHHHHHHC-------------------
T ss_conf             999998799999999999999999999738----99999999999---9999999999966-------------------


Q ss_pred             CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             78889999998309679999999999999999999999999998329989999999999999999999999997899997
Q gi|254780323|r  259 KLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKS  338 (491)
Q Consensus       259 ~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r  338 (491)
T Consensus       300 ~-----------~~~~~--l~~~i~~~~~~~g~~~~a~~a~~m~l~-~~~~~atqyal~~sl~~l~~~~~~~~sG~la~~  365 (402)
T PRK11902        300 P-----------KHLWL--MGLAIGVENLCGGMGTAAFVALLMALC-NRSFSATQYALLSALASVGRVYVGPTSGYLVEA  365 (402)
T ss_pred             C-----------CCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             7-----------75799--999999999999999999999999982-886639999999999999899988439999998


Q ss_pred             HHHHHHHHHHH
Q ss_conf             31678999999
Q gi|254780323|r  339 FRWFTSAIITP  349 (491)
Q Consensus       339 ~G~~~~l~i~P  349 (491)
T Consensus       366 ~Gy~~fFi~~~  376 (402)
T PRK11902        366 LGWPGFYLGTV  376 (402)
T ss_pred             HCCHHHHHHHH
T ss_conf             19699999999