Query gi|254780323|ref|YP_003064736.1| ATP/ADP translocase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 491
No_of_seqs 146 out of 477
Neff 8.3
Searched_HMMs 39220
Date Sun May 29 16:44:53 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780323.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 pfam03219 TLC TLC ATP/ADP tran 100.0 0 0 820.6 52.1 479 6-484 3-491 (491)
2 TIGR00769 AAA ADP/ATP carrier 100.0 0 0 799.1 22.4 464 21-484 1-491 (491)
3 COG3202 ATP/ADP translocase [E 100.0 0 0 758.9 46.8 486 5-490 5-500 (509)
4 PRK09874 drug efflux system pr 99.8 3.4E-11 8.8E-16 106.1 49.1 363 20-452 4-374 (406)
5 pfam01306 LacY_symp LacY proto 99.6 5.7E-09 1.4E-13 88.6 41.3 395 25-488 5-408 (413)
6 PRK11646 multidrug resistance 99.6 9.6E-09 2.4E-13 86.8 48.3 381 25-483 8-396 (400)
7 PRK10054 putative MFS-type tra 99.5 1.5E-08 3.9E-13 85.2 44.5 352 26-450 6-360 (395)
8 TIGR00792 gph sugar (Glycoside 99.5 8E-10 2E-14 95.3 30.1 382 34-452 11-410 (470)
9 PRK10429 melibiose:sodium symp 99.5 3E-08 7.7E-13 82.9 41.1 403 35-491 19-446 (473)
10 PRK09528 lacY galactoside perm 99.5 3.3E-08 8.4E-13 82.5 44.6 391 26-485 7-406 (418)
11 pfam07690 MFS_1 Major Facilita 99.4 8E-08 2E-12 79.5 38.6 333 34-431 3-337 (345)
12 PRK03545 sugar efflux transpor 99.4 8.6E-08 2.2E-12 79.3 47.7 385 22-491 4-390 (390)
13 PRK12307 putative sialic acid 99.3 2.9E-07 7.4E-12 75.1 46.5 376 12-453 3-387 (426)
14 PRK10489 enterobactin exporter 99.3 3E-07 7.8E-12 74.9 47.7 388 27-486 17-406 (416)
15 pfam03825 Nuc_H_symport Nucleo 99.3 3.1E-07 7.8E-12 74.9 43.3 336 58-456 34-371 (400)
16 PRK11128 putative 3-phenylprop 99.2 1.4E-06 3.5E-11 69.7 45.7 352 26-451 3-356 (383)
17 PRK05122 major facilitator sup 99.2 1.5E-06 3.9E-11 69.4 48.3 375 25-483 15-393 (395)
18 PRK11462 putative transporter; 99.2 2.2E-06 5.5E-11 68.2 43.5 304 158-491 122-441 (460)
19 PRK11551 putative 3-hydroxyphe 99.1 2.8E-06 7.1E-11 67.3 42.8 355 23-449 8-370 (406)
20 COG2211 MelB Na+/melibiose sym 99.1 2.8E-06 7.2E-11 67.3 34.6 314 147-491 114-449 (467)
21 PRK11652 emrD multidrug resist 99.1 3.3E-06 8.5E-11 66.7 45.4 384 22-483 3-390 (394)
22 PRK10091 MFS transport protein 99.1 4.8E-06 1.2E-10 65.5 48.1 344 27-448 3-349 (389)
23 PRK09952 shikimate transporter 99.0 6.2E-06 1.6E-10 64.6 45.0 348 51-450 50-407 (438)
24 PRK12382 hypothetical protein; 99.0 8.1E-06 2.1E-10 63.7 46.5 378 22-482 10-390 (393)
25 PRK11102 bicyclomycin/multidru 99.0 8.1E-06 2.1E-10 63.7 43.7 253 59-360 24-278 (377)
26 PRK09669 putative symporter Ya 99.0 9.2E-06 2.3E-10 63.2 42.1 298 158-491 120-439 (442)
27 PRK09848 glucuronide transport 99.0 9.8E-06 2.5E-10 63.0 41.9 188 158-360 122-312 (457)
28 cd06174 MFS The Major Facilita 98.9 1.5E-05 3.8E-10 61.6 45.4 324 30-448 2-326 (352)
29 PRK10473 multidrug efflux syst 98.9 1.5E-05 3.9E-10 61.5 47.2 276 32-358 8-285 (392)
30 PRK09556 uhpT sugar phosphate 98.9 1.6E-05 4.2E-10 61.3 40.3 272 27-333 26-320 (463)
31 PRK03893 putative sialic acid 98.9 2.6E-05 6.6E-10 59.7 42.7 373 20-458 6-430 (486)
32 PRK03699 hypothetical protein; 98.8 3.3E-05 8.4E-10 58.8 46.0 274 26-356 6-285 (394)
33 PRK11663 regulatory protein Uh 98.8 3.6E-05 9.1E-10 58.6 47.9 263 32-339 24-306 (434)
34 PRK11273 glpT sn-glycerol-3-ph 98.7 6.5E-05 1.7E-09 56.5 50.8 273 30-337 28-318 (452)
35 pfam00083 Sugar_tr Sugar (and 98.6 0.00015 3.8E-09 53.7 35.2 112 74-215 58-169 (449)
36 PRK10213 nepI ribonucleoside t 98.6 0.00017 4.4E-09 53.2 46.6 354 19-451 12-368 (394)
37 TIGR00710 efflux_Bcr_CflA drug 98.5 0.00021 5.2E-09 52.6 34.1 264 36-348 6-283 (400)
38 PRK11902 ampG muropeptide tran 98.5 0.00021 5.3E-09 52.6 46.3 380 33-490 5-399 (402)
39 PRK11043 inner membrane transp 98.5 0.00021 5.4E-09 52.5 47.8 272 38-365 17-291 (401)
40 pfam05977 DUF894 Bacterial pro 98.5 0.00022 5.6E-09 52.4 46.5 367 19-452 5-372 (524)
41 PRK03633 putative MFS family t 98.4 0.00045 1.1E-08 49.9 45.8 344 26-453 5-351 (381)
42 PRK10504 multidrug efflux syst 98.4 0.00048 1.2E-08 49.7 42.8 153 24-210 8-161 (471)
43 COG2814 AraJ Arabinose efflux 98.4 0.00049 1.3E-08 49.6 44.8 376 21-483 7-391 (394)
44 TIGR00882 2A0105 oligosacchari 98.3 9.1E-05 2.3E-09 55.4 15.0 366 25-458 3-377 (397)
45 KOG1330 consensus 98.3 9.7E-05 2.5E-09 55.2 15.2 361 24-440 26-403 (493)
46 KOG2533 consensus 98.2 0.00089 2.3E-08 47.6 36.5 226 78-335 97-336 (495)
47 TIGR00900 2A0121 H+ Antiporter 98.2 0.00098 2.5E-08 47.2 27.4 340 36-432 17-369 (387)
48 PRK12307 putative sialic acid 98.1 0.0013 3.3E-08 46.2 26.0 50 298-348 344-393 (426)
49 PRK10406 alpha-ketoglutarate t 98.1 0.0017 4.2E-08 45.4 40.4 263 48-354 46-321 (432)
50 TIGR00893 2A0114 d-galactonate 98.1 0.0017 4.3E-08 45.4 44.5 347 49-446 21-398 (427)
51 PRK11551 putative 3-hydroxyphe 98.0 0.0025 6.3E-08 44.1 25.8 49 296-345 329-377 (406)
52 PRK10642 proline/glycine betai 98.0 0.0027 6.8E-08 43.8 43.5 303 20-358 8-332 (490)
53 KOG2615 consensus 98.0 0.0023 5.9E-08 44.3 16.4 347 36-445 42-410 (451)
54 KOG2816 consensus 97.9 0.0034 8.7E-08 42.9 25.7 348 29-450 24-393 (463)
55 PRK10429 melibiose:sodium symp 97.8 0.0053 1.3E-07 41.5 23.1 72 44-118 52-129 (473)
56 pfam07690 MFS_1 Major Facilita 97.7 0.0073 1.9E-07 40.4 19.3 61 286-347 96-156 (345)
57 pfam11700 ATG22 Vacuole efflux 97.5 0.011 2.8E-07 38.9 39.7 338 63-450 71-443 (477)
58 COG0738 FucP Fucose permease [ 97.5 0.011 2.9E-07 38.8 39.7 285 24-354 10-314 (422)
59 PRK11195 major facilitator fam 97.4 0.015 3.8E-07 37.9 40.1 279 27-352 3-293 (415)
60 TIGR00880 2_A_01_02 Multidrug 97.4 0.015 3.8E-07 37.9 18.3 108 76-212 12-123 (148)
61 COG2223 NarK Nitrate/nitrite t 97.4 0.017 4.4E-07 37.4 34.3 384 23-478 9-401 (417)
62 TIGR00881 2A0104 phosphoglycer 97.3 0.018 4.7E-07 37.2 26.3 221 81-334 49-288 (404)
63 COG2211 MelB Na+/melibiose sym 97.3 0.019 4.8E-07 37.1 18.8 31 23-53 106-136 (467)
64 PRK11646 multidrug resistance 97.3 0.022 5.5E-07 36.6 24.6 253 31-338 101-359 (400)
65 pfam03137 OATP Organic Anion T 97.2 0.024 6.1E-07 36.3 17.8 175 168-346 160-373 (582)
66 TIGR00895 2A0115 MFS transport 97.1 0.028 7.1E-07 35.7 37.9 364 20-442 10-408 (413)
67 PRK09874 drug efflux system pr 97.1 0.03 7.6E-07 35.5 24.9 135 178-352 251-385 (406)
68 KOG2325 consensus 97.0 0.035 9E-07 34.9 18.7 162 20-210 27-192 (488)
69 COG2271 UhpC Sugar phosphate p 97.0 0.037 9.5E-07 34.8 32.9 275 30-342 28-323 (448)
70 PRK09848 glucuronide transport 97.0 0.039 1E-06 34.6 21.9 75 42-118 52-132 (457)
71 KOG3626 consensus 96.8 0.05 1.3E-06 33.7 15.0 170 170-343 260-460 (735)
72 pfam11700 ATG22 Vacuole efflux 96.8 0.054 1.4E-06 33.5 23.3 155 156-344 294-448 (477)
73 KOG3762 consensus 96.7 0.059 1.5E-06 33.2 12.0 183 261-476 359-542 (618)
74 PRK03893 putative sialic acid 96.6 0.067 1.7E-06 32.7 25.9 136 174-351 299-434 (486)
75 pfam06609 TRI12 Fungal trichot 96.5 0.078 2E-06 32.2 34.8 77 32-109 49-125 (598)
76 pfam03092 BT1 BT1 family. Memb 96.5 0.082 2.1E-06 32.0 25.7 274 42-357 4-293 (425)
77 pfam00083 Sugar_tr Sugar (and 96.5 0.083 2.1E-06 32.0 23.7 34 414-448 376-409 (449)
78 PRK10133 L-fucose transporter; 96.5 0.084 2.1E-06 32.0 45.9 288 25-355 24-338 (438)
79 PRK10489 enterobactin exporter 96.4 0.093 2.4E-06 31.6 36.0 276 29-353 110-388 (416)
80 pfam01306 LacY_symp LacY proto 96.4 0.096 2.4E-06 31.5 28.9 268 46-356 121-393 (413)
81 PRK05122 major facilitator sup 96.3 0.098 2.5E-06 31.5 22.8 82 272-356 303-384 (395)
82 PRK10642 proline/glycine betai 96.3 0.099 2.5E-06 31.4 22.5 22 34-55 57-78 (490)
83 PRK11902 ampG muropeptide tran 96.3 0.1 2.7E-06 31.2 24.6 275 28-349 93-376 (402)
84 pfam05631 DUF791 Protein of un 96.2 0.12 3E-06 30.9 21.6 224 37-301 44-272 (354)
85 KOG2532 consensus 96.2 0.12 3.1E-06 30.7 29.5 236 70-342 81-327 (466)
86 PRK09528 lacY galactoside perm 96.1 0.13 3.3E-06 30.4 30.2 264 47-354 123-392 (418)
87 PRK09952 shikimate transporter 95.9 0.15 3.8E-06 30.0 24.5 35 416-450 369-403 (438)
88 TIGR00883 2A0106 MFS transport 95.8 0.16 4.1E-06 29.7 19.1 355 51-450 21-394 (413)
89 PRK08633 2-acyl-glycerophospho 95.8 0.16 4.2E-06 29.7 46.0 362 27-446 10-386 (1150)
90 PRK09584 tppB putative tripept 95.7 0.18 4.7E-06 29.3 36.0 145 27-213 21-180 (500)
91 PRK12382 hypothetical protein; 95.5 0.21 5.3E-06 28.9 23.1 73 282-355 309-381 (393)
92 PRK11010 ampG muropeptide tran 95.5 0.22 5.5E-06 28.7 40.9 333 27-407 12-360 (490)
93 COG2270 Permeases of the major 95.4 0.22 5.6E-06 28.7 16.5 275 41-350 38-326 (438)
94 PRK11273 glpT sn-glycerol-3-ph 95.4 0.23 5.8E-06 28.6 22.3 73 416-491 377-449 (452)
95 PRK11462 putative transporter; 95.4 0.24 6E-06 28.4 22.0 19 63-82 80-98 (460)
96 TIGR00883 2A0106 MFS transport 95.3 0.24 6.1E-06 28.4 39.1 80 18-98 215-307 (413)
97 PRK03545 sugar efflux transpor 95.3 0.24 6.2E-06 28.3 25.1 262 23-347 70-364 (390)
98 COG2270 Permeases of the major 95.3 0.25 6.3E-06 28.3 27.3 43 407-450 362-404 (438)
99 TIGR00898 2A0119 cation transp 94.9 0.31 7.8E-06 27.5 27.6 336 48-438 123-509 (557)
100 PRK09584 tppB putative tripept 94.8 0.33 8.5E-06 27.3 25.9 120 316-445 320-440 (500)
101 KOG2504 consensus 94.7 0.35 9E-06 27.1 17.5 355 61-477 81-476 (509)
102 KOG3098 consensus 94.5 0.39 1E-05 26.7 34.2 288 20-355 2-325 (461)
103 PRK03633 putative MFS family t 94.4 0.39 1E-05 26.7 22.8 57 286-343 296-352 (381)
104 PRK03699 hypothetical protein; 94.2 0.43 1.1E-05 26.4 35.4 274 27-358 93-375 (394)
105 pfam03209 PUCC PUCC protein. T 94.2 0.43 1.1E-05 26.3 38.0 173 167-350 109-283 (402)
106 PRK10207 inner membrane transp 93.3 0.61 1.5E-05 25.2 36.7 99 392-491 385-490 (490)
107 PRK06814 acylglycerophosphoeth 93.1 0.64 1.6E-05 25.0 43.6 364 26-447 11-395 (1139)
108 TIGR00899 2A0120 sugar efflux 93.0 0.67 1.7E-05 24.9 39.6 346 33-453 3-355 (377)
109 KOG0255 consensus 91.9 0.91 2.3E-05 23.8 39.3 101 75-208 131-231 (521)
110 TIGR02718 sider_RhtX_FptX side 91.4 1 2.6E-05 23.4 25.4 175 169-364 120-295 (391)
111 TIGR00711 efflux_EmrB drug res 88.9 1.6 4E-05 22.0 33.4 355 29-437 4-404 (501)
112 TIGR00890 2A0111 Oxalate/Forma 88.7 1.6 4E-05 21.9 16.3 217 46-304 26-273 (429)
113 KOG3764 consensus 87.2 1.9 4.9E-05 21.2 19.5 197 63-308 108-305 (464)
114 TIGR00886 2A0108 nitrite trans 86.7 2 5.2E-05 21.0 29.6 299 29-360 2-391 (472)
115 pfam06963 FPN1 Ferroportin1 (F 85.0 2.4 6.2E-05 20.4 36.6 153 261-430 248-401 (433)
116 TIGR00924 yjdL_sub1_fam amino 84.3 2.6 6.6E-05 20.2 9.3 123 170-296 133-271 (501)
117 TIGR00889 2A0110 nucleoside tr 84.0 2.7 6.8E-05 20.1 25.8 367 29-451 8-381 (435)
118 TIGR00879 SP MFS transporter, 83.8 2.7 6.9E-05 20.0 26.4 240 75-348 147-427 (572)
119 PRK09705 cynX putative cyanate 83.6 2.8 7.1E-05 20.0 43.5 240 45-345 31-273 (393)
120 TIGR00896 CynX cyanate transpo 83.0 2.9 7.4E-05 19.8 25.7 277 43-371 20-305 (372)
121 KOG4686 consensus 82.5 3 7.7E-05 19.7 15.2 181 272-483 263-445 (459)
122 pfam00854 PTR2 POT family. The 81.9 3.2 8.1E-05 19.5 21.2 41 171-211 56-99 (372)
123 TIGR02840 spore_YtaF putative 81.1 3.4 8.6E-05 19.3 6.0 52 221-276 68-122 (215)
124 COG2807 CynX Cyanate permease 80.1 3.6 9.2E-05 19.1 36.3 279 30-370 11-299 (395)
125 pfam02487 CLN3 CLN3 protein. T 79.5 3.7 9.6E-05 18.9 13.8 39 168-211 128-166 (409)
126 PRK10077 xylE D-xylose transpo 78.9 3.9 9.9E-05 18.8 42.6 39 169-207 148-186 (486)
127 KOG2563 consensus 76.9 4.4 0.00011 18.4 25.3 98 259-361 252-351 (480)
128 TIGR00894 2A0114euk Na(+)-depe 76.4 4.5 0.00012 18.3 22.5 326 70-450 100-446 (514)
129 TIGR00926 2A1704 Oligopeptide 72.1 5.6 0.00014 17.5 9.3 211 154-364 111-391 (781)
130 TIGR02871 spore_ylbJ sporulati 72.0 5.7 0.00015 17.5 11.7 151 172-330 102-277 (384)
131 pfam01770 Folate_carrier Reduc 68.1 6.8 0.00017 16.9 26.0 164 167-335 113-306 (410)
132 TIGR00885 fucP L-fucose:H+ sym 57.4 10 0.00026 15.5 20.6 159 251-431 218-382 (427)
133 TIGR00819 ydaH AbgT transporte 54.3 11 0.00029 15.2 20.4 186 267-476 308-510 (527)
134 PRK11339 abgT putative aminobe 54.0 11 0.00029 15.1 18.9 69 269-343 295-364 (508)
135 KOG0253 consensus 52.2 12 0.00031 14.9 12.8 94 320-438 389-482 (528)
136 pfam07672 MFS_Mycoplasma Mycop 51.7 12 0.00031 14.9 10.6 141 214-359 38-190 (265)
137 COG3104 PTR2 Dipeptide/tripept 50.1 13 0.00033 14.7 28.5 167 27-230 21-202 (498)
138 PRK12768 CysZ-like protein; Re 48.9 14 0.00035 14.5 16.3 27 290-316 161-187 (241)
139 pfam04341 DUF485 Protein of un 46.8 14 0.00037 14.3 10.1 63 29-91 18-83 (91)
140 COG4209 LplB ABC-type polysacc 44.6 16 0.0004 14.1 5.7 69 402-486 237-305 (309)
141 pfam11368 DUF3169 Protein of u 44.5 16 0.0004 14.1 12.0 28 179-206 6-33 (248)
142 pfam03547 Mem_trans Membrane t 43.5 16 0.00041 13.9 27.5 102 178-283 90-191 (321)
143 pfam04276 DUF443 Protein of un 42.3 17 0.00043 13.8 6.6 53 173-228 47-100 (197)
144 PTZ00207 hypothetical protein; 41.7 17 0.00044 13.8 20.2 101 3-123 16-119 (591)
145 TIGR00771 DcuC transporter, an 41.5 17 0.00044 13.7 6.4 64 261-328 204-267 (390)
146 pfam03820 Mtc Tricarboxylate c 40.1 18 0.00046 13.6 7.3 13 165-177 101-113 (307)
147 PRK10167 hypothetical protein; 34.6 22 0.00055 13.0 2.9 14 306-319 108-121 (169)
148 TIGR01129 secD protein-export 34.5 22 0.00055 12.9 9.0 111 156-284 375-489 (522)
149 KOG3810 consensus 34.1 22 0.00056 12.9 15.3 162 166-335 113-294 (433)
150 TIGR00934 2a38euk potassium up 32.9 23 0.00058 12.7 1.8 28 180-207 820-850 (1197)
151 TIGR00805 oat sodium-independe 32.1 23 0.0006 12.7 7.3 39 170-208 196-234 (723)
152 PRK12405 electron transport co 29.3 26 0.00066 12.3 18.9 101 298-455 57-157 (224)
153 TIGR00791 gntP transporter, gl 28.2 27 0.00069 12.2 3.3 242 162-420 122-399 (458)
154 PRK04125 murein hydrolase regu 27.9 27 0.00069 12.2 9.0 91 167-259 44-135 (141)
155 PRK09292 Na(+)-translocating N 25.8 29 0.00075 11.9 17.2 52 298-349 60-111 (208)
156 TIGR02707 butyr_kinase butyrat 24.2 31 0.0008 11.7 1.6 22 421-442 267-288 (353)
157 KOG4112 consensus 23.0 33 0.00084 11.5 6.4 37 172-208 15-51 (101)
158 TIGR01998 PTS-II-BC-nag PTS sy 22.3 34 0.00087 11.4 7.5 75 74-208 151-233 (571)
159 pfam08349 DUF1722 Protein of u 22.3 34 0.00087 11.4 3.3 16 1-16 5-20 (117)
160 TIGR00945 tatC twin arginine-t 22.2 34 0.00087 11.4 11.9 40 164-205 81-120 (226)
161 PRK13109 flhB flagellar biosyn 22.1 34 0.00087 11.4 18.7 32 395-426 218-249 (358)
162 TIGR02872 spore_ytvI sporulati 21.4 35 0.0009 11.3 18.8 51 60-114 21-71 (350)
163 TIGR01404 FlhB_rel_III type II 21.4 35 0.0009 11.3 21.3 51 254-304 115-165 (346)
164 PRK07157 acetate kinase; Provi 20.6 37 0.00093 11.1 3.3 24 422-445 293-316 (398)
165 TIGR00967 3a0501s007 preprotei 20.5 37 0.00093 11.1 3.7 73 412-488 406-482 (489)
166 pfam06592 DUF1138 Protein of u 20.5 35 0.00089 11.3 0.5 16 157-172 7-22 (73)
167 COG4792 EscU Type III secretor 20.4 37 0.00094 11.1 16.8 130 23-175 26-161 (349)
168 CHL00024 psbI photosystem II p 20.0 37 0.00095 11.1 1.8 18 94-111 6-23 (36)
No 1
>pfam03219 TLC TLC ATP/ADP transporter.
Probab=100.00 E-value=0 Score=820.62 Aligned_cols=479 Identities=53% Similarity=0.972 Sum_probs=460.5
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 47789999999963878112327999999999999999999998778865124854467999999999999999999999
Q gi|254780323|r 6 KILSVLLKIWQVFCAVKMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKL 85 (491)
Q Consensus 6 ~~~~~~~~l~~~~~~i~~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l 85 (491)
+..+...|+|+.+|||++.|+||+++|+++|||++++|+++|++||+++++++|||.+||+|+|.++|++++++.+|+|+
T Consensus 3 ~~~~~~~~~r~~~~pi~~~E~~kf~~m~lmff~i~f~y~~lR~~KD~lvv~~~gae~IpflK~~~vlP~a~~~~~~y~kl 82 (491)
T pfam03219 3 SSKSSFSKLRAILWPIHRHELKKFLPMALMMFCILFNYNILRDIKDSLVVTAIGAEVIPFLKVWGVLPSAILFTIIYAKL 82 (491)
T ss_pred CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 66255087899857561868989999999999999999999860020787258849999999999989999999999999
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 96338999999999999999999999984210014652345555310101344578765557999999999999999999
Q gi|254780323|r 86 SNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMIN 165 (491)
Q Consensus 86 ~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis 165 (491)
++|++++|+|++++.+|.++|++|++++|||+|.+||+..+++.+...++++++++++.++|++++||+++|+||++++|
T Consensus 83 ~n~~~~~klFy~~~~~Fl~ff~lf~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~W~~slfYv~aElWgsvvls 162 (491)
T pfam03219 83 SNRLSREKVFYIIISFFLVFFALFAFVLYPNRDILHPNPEADKLLSILPPGFKWFIAMVRNWSYSLFYIMAELWGSVVLS 162 (491)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 75277757899999999999999999992648751987799988732530479999999888899999999998999999
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----------CCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999998640989989999999989999999988999999630123----------22489999999999999999999
Q gi|254780323|r 166 LMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNE----------LMIYYSMLTLILSSILLMAVYRW 235 (491)
Q Consensus 166 ~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~~ 235 (491)
++||+||||+||++||||+||+++.|+|+|.++||..+.++++..+. ..+........+++++++.++++
T Consensus 163 lLFW~fANeitt~~eAKRfyplf~~gan~~li~sG~~~~~~s~~~~~~~~~~~~~~~~~l~~l~~~v~~~giii~~l~~~ 242 (491)
T pfam03219 163 LLFWQFANQITTVEEAKRFYPLFGLGGNLALIISGQIIVYLSNLIRKALPSGVDSWEVSLKYLMSIVVLSGIIIILLYRW 242 (491)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998507999998999999999999999999999999850233465332327999999999999999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 99840245223320000112345788899999983096799999999999999999999999999983299899999999
Q gi|254780323|r 236 MNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMG 315 (491)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g 315 (491)
++++..++++....+++++|+|+|.++.|++|.+.+||||++|+.++++|+++.|++|++||+.+++++||++|+++|||
T Consensus 243 l~~~vl~~~~~~~~~~k~kk~k~K~s~~es~k~l~~S~yL~~Ia~lVi~Ygi~inLvE~~wK~~~k~~yp~~~~y~afmg 322 (491)
T pfam03219 243 INKNVLTDPRLYASAKKKKKKKPKMSLKESFKYLLSSRYLLLIAILVISYGISINLVEVVWKAKVKELYPTPNEYNAFMG 322 (491)
T ss_pred HHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 99986147431123430014677877899999998678999999999999999999999999999997799999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 99999999999999997899997316789999999999999999999841012346667873002079999999999999
Q gi|254780323|r 316 QFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVL 395 (491)
Q Consensus 316 ~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~ 395 (491)
++++++|++++++++++++++||+||+.++.++|+++++++.+||+++++++..........+.+|+.+++++|++++++
T Consensus 323 ~~~~~tgi~tii~~ll~~~iir~~Gw~~~a~itPii~litg~~FF~~~~f~~~~~~~~~~~~g~~pl~lav~~G~~qnvl 402 (491)
T pfam03219 323 KFSTWTGIVTILFMLLGSNIIRKFGWTTAALITPLVLLITGILFFSFIIFEKHLGGIFAGFFGTTPLALAVLIGAIQNIL 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 89999999999999998999998047889998279999999999999997666778988861567689999999999999
Q ss_pred HHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99876344646687775226976736577767888764667779999999999830000233379999999999999999
Q gi|254780323|r 396 SKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIY 475 (491)
Q Consensus 396 ~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~ 475 (491)
+|+.|||++||+|||+|+|+|+|.|+|+|+++||+++|+||++||++|+++...++.++.++.+|+++++.+++|.+|++
T Consensus 403 sK~~KYslfDptKEmayipLd~e~K~KgKAaiDvv~~r~GKSgGs~iq~~~~~~f~~~~~~~~~p~l~~i~~~i~~~Wi~ 482 (491)
T pfam03219 403 SKSAKYSLFDATKEMAYIPLDDELKTKGKAAIDVIGARLGKSGGSLIQQGLLIIFPTGSLASITPYLAVIFIVIIIVWIF 482 (491)
T ss_pred HHHHHHHCCCHHHHHHEEECCHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99974511356677730258877753301000233013344177899999999964765775524999999999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999970899
Q gi|254780323|r 476 VVNQLSKEY 484 (491)
Q Consensus 476 ~~~~L~~~y 484 (491)
++.+|+|+|
T Consensus 483 av~~L~k~y 491 (491)
T pfam03219 483 AVKSLNKQY 491 (491)
T ss_pred HHHHHHCCC
T ss_conf 999971459
No 2
>TIGR00769 AAA ADP/ATP carrier protein family; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane.
Probab=100.00 E-value=0 Score=799.06 Aligned_cols=464 Identities=48% Similarity=0.886 Sum_probs=442.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 78112327999999999999999999998778865124--8544679999999999999999999999633899999999
Q gi|254780323|r 21 VKMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHM--GAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVV 98 (491)
Q Consensus 21 i~~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~--g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~ 98 (491)
|+..|.||++||++|+||++++|++||+.||+++++.. |||.|||+|+|+++|++++++.+|+||.|+++|+.+|+.+
T Consensus 1 i~~~elkK~~PL~lm~FCi~fNYt~Lrd~KD~LvVta~GsgAE~IPFLK~W~~vP~Avi~ml~Y~KL~~~L~k~alFY~v 80 (491)
T TIGR00769 1 IEKSELKKILPLFLMFFCILFNYTILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPSAVIFMLIYTKLSNILSKEALFYTV 80 (491)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEH
T ss_conf 93112321547899999998656876238867898358997210212557401025888999998885111433200010
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 99999999999999842100146523455553101013445787655579999999999999999999999999864098
Q gi|254780323|r 99 VSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKT 178 (491)
Q Consensus 99 ~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~ 178 (491)
..+|.++|.+|++++||.+|.+||+..+|+.+..++|+++|++.+.|+|.++.|||++|+||++++|++||+|||+++++
T Consensus 81 ~~~Fl~fF~lF~~V~YP~~d~lHP~~~Ad~ll~~L~p~f~G~i~ilR~WsFa~FYv~aELWGSvvlSlLFWGfANqIT~i 160 (491)
T TIGR00769 81 ISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTI 160 (491)
T ss_pred HHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf 57899998521487517776547005899999850776421245435588999999999999999999877630556321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----------CHHHHHHHHHHHHHHHHHHHHHHH-----------
Q ss_conf 99899999999899999999889999996301232----------248999999999999999999999-----------
Q gi|254780323|r 179 EEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNEL----------MIYYSMLTLILSSILLMAVYRWMN----------- 237 (491)
Q Consensus 179 ~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~~~----------- 237 (491)
+||||+|+++|.|+|++.+++|..+.++++.+... .+.......+.++..++..|++++
T Consensus 161 ~EAKrFY~LfG~GaN~al~~sG~~~~y~s~~r~~~yg~gvd~w~~~~~~l~~~~~~sg~~i~~~Y~w~nhltidtsiPPs 240 (491)
T TIGR00769 161 DEAKRFYALFGLGANVALIVSGRVIKYFSKLRASLYGEGVDGWHVSLLNLMAIVICSGLIIILLYRWINHLTIDTSIPPS 240 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC
T ss_conf 13232455787899999987778998863043023305515246888888999999999999996316330120358876
Q ss_pred HHCCCCCCCCCCCCCCCCC---CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 8402452233200001123---4578889999998309679999999999999999999999999998329989999999
Q gi|254780323|r 238 LYVLTDPQQYSPKRGSVKK---KLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFM 314 (491)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~ 314 (491)
+++..+++..++++-++|| |+|.+..|+++.+.+|||++.||+++++|+++.|++|..||++++++||+++|+++||
T Consensus 241 r~Vl~~~R~~~p~~lk~KK~g~KPk~~~~esl~~L~~S~Y~~~LA~LV~aYGi~inLvEVtWKsklk~~yP~~~~Ys~fM 320 (491)
T TIGR00769 241 RNVLTDPRSYNPAELKEKKKGTKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKEQYPSPNEYSAFM 320 (491)
T ss_pred CCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEEEEEHHHHCCCCCCHHHHHHHH
T ss_conf 65579834479799860434678675188899986237128989999875335788888644654203167855776554
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 999999999999999997-8999973167899999999999999999998410123466678730020799999999999
Q gi|254780323|r 315 GQFIQWTGIVTIVFMILG-SNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQN 393 (491)
Q Consensus 315 g~~~~~v~i~tii~qll~-~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~ 393 (491)
|+|+.++|++++.++++. ++++||+||..+|.+||++++++|+.||++.+|.....+.....++++||.+++++|+++|
T Consensus 321 G~f~~~~Gvv~~~~mLl~~~~v~~K~GW~~aA~iTP~v~L~TG~~FFsli~f~~~~~~~l~a~LG~TPL~lAv~vG~~QN 400 (491)
T TIGR00769 321 GNFSTLTGVVSVLMMLLSGGNVIRKYGWLVAALITPLVLLLTGVAFFSLILFGKPAAPILVAVLGMTPLLLAVYVGAIQN 400 (491)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHE
T ss_conf 22478999999999998356235311012234676799999999999999835503578898873118999999844320
Q ss_pred HHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998763446466877752269767365777678887646677799999999998300002333799999999999999
Q gi|254780323|r 394 VLSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIW 473 (491)
Q Consensus 394 ~~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~W 473 (491)
+++|.+|||+||+||||.|+|||+|+|.|||++||+++.|+||||||++||++...++.-...+.+|+++.+.++|..+|
T Consensus 401 ~lSk~~KyslFD~tKeMAyIPLd~~~KvkGkAAidvv~~RlGKSGGaLIqq~llv~fgS~afi~~tPyla~iLl~Iv~~W 480 (491)
T TIGR00769 401 ILSKSTKYSLFDATKEMAYIPLDEEQKVKGKAAIDVVAARLGKSGGALIQQGLLVIFGSLAFIASTPYLAVILLIIVVVW 480 (491)
T ss_pred EEECCEEECCCHHHHHCCCCCCCCCCCCHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 22124112007023522568988200201201232112167753037999999999988999875489999999999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999970899
Q gi|254780323|r 474 IYVVNQLSKEY 484 (491)
Q Consensus 474 i~~~~~L~~~y 484 (491)
+.++.+|+|+|
T Consensus 481 l~aa~~L~k~~ 491 (491)
T TIGR00769 481 LAAAKSLNKEF 491 (491)
T ss_pred HHHHHHHCCCC
T ss_conf 99998606899
No 3
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=100.00 E-value=0 Score=758.86 Aligned_cols=486 Identities=50% Similarity=0.944 Sum_probs=459.0
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 14778999999996387811232799999999999999999999877886512485446799999999999999999999
Q gi|254780323|r 5 QKILSVLLKIWQVFCAVKMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMK 84 (491)
Q Consensus 5 ~~~~~~~~~l~~~~~~i~~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~ 84 (491)
.|.-...+|+++++|||||.|+||++++++++||++++|+++|++||+++++++|||.+||+|+|.++|++++++.+|+|
T Consensus 5 ~~~~~~~~k~~~~~wpi~r~E~~kflpl~Ll~f~I~~ny~~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~k 84 (509)
T COG3202 5 SEEEKYFSKLRSRLWPIRRYELKKFLPLALLFFCILFNYNLLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQK 84 (509)
T ss_pred CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHH
T ss_conf 63434433450036402388888799999999999999999986110168605763211999999754199999999999
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 996338999999999999999999999984210014652345555310101-3445787655579999999999999999
Q gi|254780323|r 85 LSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWP-YLKWFIYLAGKWSFALFYVFAELWGAVM 163 (491)
Q Consensus 85 l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~w~~~~fYv~~e~~~~~v 163 (491)
++++++++++|++++++|+.+|++|++++||++|.+||++.+.+++....| +++|++.++++|.+++||+++|+||+++
T Consensus 85 l~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV 164 (509)
T COG3202 85 LLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLV 164 (509)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 97307899999999999999999999998235022689879999887418753257767722067999999999988999
Q ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------CCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999998640989989999999989999999988999999630123-------224899999999999999999999
Q gi|254780323|r 164 INLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNE-------LMIYYSMLTLILSSILLMAVYRWM 236 (491)
Q Consensus 164 is~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~ 236 (491)
+|++||+||||++|.|||||+||+++.|+|++.+++|..+.+++++... .............++.++.+++++
T Consensus 165 ~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~ 244 (509)
T COG3202 165 LSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYI 244 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999988610987503689999998999999999999986321667578789999999999999999999999999
Q ss_pred HHHCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 98402452233-20000112345788899999983096799999999999999999999999999983299899999999
Q gi|254780323|r 237 NLYVLTDPQQY-SPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMG 315 (491)
Q Consensus 237 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g 315 (491)
++.+.++|... +..+++++++.|.++.|++|.+.|||||+.|++.+++|++++|++|.+||+.+++.+|+++|+++|+|
T Consensus 245 ~r~il~~~~f~~~~~~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~ 324 (509)
T COG3202 245 NRNVLTDPLFYLRAKKKKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMG 324 (509)
T ss_pred HHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 75324674115777421445545675789999998656999999999999878888889998658885687547999988
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 99999999999999-99789999731678999999999999999999984101234666787300207999999999999
Q gi|254780323|r 316 QFIQWTGIVTIVFM-ILGSNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNV 394 (491)
Q Consensus 316 ~~~~~v~i~tii~q-ll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~ 394 (491)
+++.++|+++++.+ +.+++++||.||..+++++|++++++++.||+.++|+..........++.+|+.++++.|+++++
T Consensus 325 ~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~lFF~~~~f~~~~~~~~~~~~~~~pl~L~v~iG~iqnv 404 (509)
T COG3202 325 RFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVLFFGFAFFNNSIGSIFGGILGSPPLVLAVYIGGIQNV 404 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 89999999999999962588998842578899889999999999999999863021000320047731999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99987634464668777522697673657776788876466777999999999983000023337999999999999999
Q gi|254780323|r 395 LSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWI 474 (491)
Q Consensus 395 ~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi 474 (491)
.+|+.||+++|++|||+|+|+|||+|+|+|+++||++.|+||++||++|++++.+++..+.++.+|+++++.+++|.+|+
T Consensus 405 lsK~~KYslfD~tKEma~ipldpe~r~kgKAa~D~i~~k~GKSiGSli~~~~~~i~~~~~~~~~~~v~~~i~~ii~~~Wi 484 (509)
T COG3202 405 LSKITKYSLFDATKEMAYIPLDPEYRTKGKAAVDVIGGKLGKSIGSLIQSLLFIIFPTADVRAISPVLAVIFIIICVLWI 484 (509)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99887545454667887082787677402201343442246517789998898621477777775599999999999999
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 9999970899998534
Q gi|254780323|r 475 YVVNQLSKEYTQLISK 490 (491)
Q Consensus 475 ~~~~~L~~~y~~~i~~ 490 (491)
+++.+|+|+|++++++
T Consensus 485 ~~v~~Lnk~Y~~~~~~ 500 (509)
T COG3202 485 YAVKYLNKEYQAAIQR 500 (509)
T ss_pred HHHHHHHHHHHHHHCH
T ss_conf 9999997999998552
No 4
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.78 E-value=3.4e-11 Score=106.07 Aligned_cols=363 Identities=11% Similarity=0.072 Sum_probs=221.4
Q ss_pred CCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 878112327-999999999999999999998778865124--8544679----999999999999999999999633899
Q gi|254780323|r 20 AVKMSEAKK-FIPMTLMMFLVLFNFSTLRPIKDSLVVPHM--GAEIISF----VKLWCVFPSAILFTILYMKLSNILETE 92 (491)
Q Consensus 20 ~i~~~E~~~-~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~--g~e~lp~----l~~~~~l~~s~~~~~~y~~l~~~~~~~ 92 (491)
..+|.-||| +..+.+--|+...++.++-|+=-...-+-. |.|.... +.. .-.....+..+..++++||++||
T Consensus 4 ~~~~~~w~~~l~~l~~~~f~~~~g~~~i~P~lP~y~~~lg~~~~~~~~~~~Gli~s-~~~l~~~i~sp~~G~lsDr~GRK 82 (406)
T PRK09874 4 SDTPINWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFS-ITFLFSAIASPFWGGLADRKGRK 82 (406)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 99986753999999999999999999999999999999499807799999999999-99999999999999999980648
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999842100146523455553101013445787655579999999999999999999999999
Q gi|254780323|r 93 KLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFA 172 (491)
Q Consensus 93 ~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~ 172 (491)
++.-.-...+.+..+++++.= +.|..-+.-+...+.+..+ ... -++.
T Consensus 83 ~ill~gl~~~~i~~~l~~~a~-------------------------------s~~~ll~~R~l~Gi~~~~~-~~a-~a~i 129 (406)
T PRK09874 83 IMLLRSALGMGIVMVLMGMAQ-------------------------------NIWQFLILRALLGLLGGFV-PNA-NALI 129 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHHHCCCHH-HHH-HHHH
T ss_conf 999999999999999998736-------------------------------0999999999998705508-889-9999
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 86409899899999999899999999889999996301232248999999999999999999999840245223320000
Q gi|254780323|r 173 NRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRG 252 (491)
Q Consensus 173 n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 252 (491)
.|.+.++|..+-.|.++++.++|.++|+.+...+.+..+.....+........+..+.. . ..+++. .
T Consensus 130 ad~~p~~~rg~~~g~~~~~~~~G~~~GP~iGg~l~~~~g~~~~F~~~a~~~~~~~ll~~----~---~~~~~~------~ 196 (406)
T PRK09874 130 ATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADHYGLRPVFFITASVLFLCFLVTL----F---CIREKF------Q 196 (406)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH----H---HCCCCC------C
T ss_conf 98467756999999999999988888876799999973629999999999999999999----8---636456------8
Q ss_pred CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 11234578889999998309679999999999999999999999999998329989999999999999999999999997
Q gi|254780323|r 253 SVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILG 332 (491)
Q Consensus 253 ~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~ 332 (491)
+.+++++.+.+|..+.+.+.+.+..+....+...+....++..+-.+.++...+..+.....|.+....++..++.+...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~~~~~~~~~~~~~g~~~~~~gi~~~l~~~~~ 276 (406)
T PRK09874 197 PVSKKEMLHVREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRL 276 (406)
T ss_pred CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 85421112066899885353699999999999999999999999999999836544499999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999731678999999999999999999984101234666787300207999999999999999876344646687775
Q gi|254780323|r 333 SNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAF 412 (491)
Q Consensus 333 ~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~ 412 (491)
+++-+|+|.+...... .++.+.+++.+.+..... ...... +.-..-++...|+.+.+-
T Consensus 277 G~l~dr~g~~~~~~~~---~~~~~~~l~~l~~~~~~~---------------~l~i~~----~l~G~g~g~~~P~~~~~~ 334 (406)
T PRK09874 277 GKLGDRIGPEKILITA---LIISVLLLIPMSFVQTPL---------------QLGILR----FLLGAADGALLPAVQTLL 334 (406)
T ss_pred HHHHHHHCCHHHHHHH---HHHHHHHHHHHHHHHHHH---------------HHHHHH----HHHHHHHHHHHHHHHHHH
T ss_conf 9999873839999999---999999999999997599---------------999999----999999999999999999
Q ss_pred E-ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 2-269767365777678887646677799999999998300
Q gi|254780323|r 413 I-PLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPM 452 (491)
Q Consensus 413 ~-pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~ 452 (491)
. ..+++.|.++.+..... ..+|...|.++...+...++.
T Consensus 335 ~~~~~~~~~G~~~g~~~~~-~~lG~~~GPll~G~l~~~~G~ 374 (406)
T PRK09874 335 VYNSSNQIAGRIFSYNQSF-RDIGNVTGPLMGAAISANYGF 374 (406)
T ss_pred HHHCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCH
T ss_conf 8758884777999999999-999999999999999997485
No 5
>pfam01306 LacY_symp LacY proton/sugar symporter. This family is closely related to the sugar transporter family.
Probab=99.59 E-value=5.7e-09 Score=88.56 Aligned_cols=395 Identities=12% Similarity=0.120 Sum_probs=211.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 23279999999999999999999987788651--2485446799999999999999999999996338999999999999
Q gi|254780323|r 25 EAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVP--HMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFF 102 (491)
Q Consensus 25 E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~--~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f 102 (491)
+.+..+.+.+++|+--+++.+.=|.=---.-+ ..+++.+-.+... ...+++++.++++.++||++.+|-.-.....-
T Consensus 5 ~~~~y~~ls~~yf~yF~~~g~~~pf~~lwL~~~~Gls~~~IGil~s~-~~~~~il~qp~~G~lsDk~g~rk~ll~~i~~~ 83 (413)
T pfam01306 5 KNTNFWMFGLFFFFYFFIMSAYFPFFPIWLHDVNHLSKTDTGIVFSC-ISLFSILFQPLFGLISDKLGLRKHLLWCITGL 83 (413)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 68529999999999999999999899999777579899999999999-99999998278998603445501899999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCHH
Q ss_conf 999999999984210014652345555310101344578765557999999999999999999999999---98640989
Q gi|254780323|r 103 VSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQF---ANRITKTE 179 (491)
Q Consensus 103 ~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~---~n~~f~~~ 179 (491)
...+..+....+ .. ..-.+.|... +.+.+..+. +|+= ..|..+.+
T Consensus 84 l~l~~~ffi~~~--~p----------------------ll~~~~~l~~-------lv~~i~~~~-~~~~~~pl~ea~~~~ 131 (413)
T pfam01306 84 LVLFAPFFIYVF--GP----------------------LLQSNILVGA-------IVGGVYLGF-VFSAGAGAIEAYIEK 131 (413)
T ss_pred HHHHHHHHHHHH--HH----------------------HHHHHHHHHH-------HHHHHHHHH-HHCCCHHHHHHHHHH
T ss_conf 999999999999--78----------------------9899999999-------999999999-985542799999999
Q ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 9899---9999998999999998899999963012322489999999999999999999998402452233200001123
Q gi|254780323|r 180 EATR---FYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKK 256 (491)
Q Consensus 180 qaKR---lf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 256 (491)
.++| =||-+-..|++|-+++...+..+.+..+....+.... .+.....+.. ...+.+++.....+..+.+
T Consensus 132 ~sr~~~~~YGriRlwGSiGfai~a~~~G~l~~~~p~~~f~~~s~----~~~i~~ll~~---~~~~~~~~~~~~~~~~~~~ 204 (413)
T pfam01306 132 VSRRSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSG----FALILALLLM---FAKPDKSSSAIVADALGAN 204 (413)
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH----HHHHHHHHHH---HCCCCCCCHHHHHCCCCCC
T ss_conf 98763774213688999999999998678875285289999999----9999999999---8078764102331010124
Q ss_pred CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 45788899999983096799999999999999999999999999983299899999999999999999999999978999
Q gi|254780323|r 257 KLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNIL 336 (491)
Q Consensus 257 ~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll 336 (491)
+++.+ ......++|+|-...+.++++......+..|.++-......++++++-++.+|.........-+.++++.++++
T Consensus 205 ~~~~~-~~~~~~llk~~~~~~f~l~v~g~~~~y~v~d~~f~~f~~~~~~~~~~g~~~~G~l~s~~v~~E~~~m~~~~~l~ 283 (413)
T pfam01306 205 KSAFS-LRLALELFRMPKFWVFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLII 283 (413)
T ss_pred CCCCC-HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57764-77799996154799999999999999887777789999999634276843121999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHEEC
Q ss_conf 973167899999999999999999998410123466678730020799999999999999987634-4646687775226
Q gi|254780323|r 337 KSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYT-MFDSTKEMAFIPL 415 (491)
Q Consensus 337 ~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYs-l~~p~~E~l~~pl 415 (491)
+|+|.+..+++.-++..+-- ...... ++.+. + .+.+ ...+.++. +.=++.+-...-.
T Consensus 284 ~R~G~k~~Llla~~i~~iR~---~~~~~~--------------~~~~~-i---i~~q-lLH~~t~~l~~va~~kyI~~~f 341 (413)
T pfam01306 284 NRIGAKNALLIAGTIMSVRI---LGSSFA--------------TTALE-V---VILK-MLHMFEVPFLLVGCFKYITSQF 341 (413)
T ss_pred HHCCCHHHHHHHHHHHHHHH---HHHHCC--------------CCHHH-H---HHHH-HHHHHHHHHHHHHHHHHHHHHC
T ss_conf 87083989999999999999---997432--------------30699-9---9999-9999899999999999999867
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9767365777678887646677799999999998300002333799999999999999999999708999985
Q gi|254780323|r 416 DDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVNQLSKEYTQLI 488 (491)
Q Consensus 416 ~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~~~~L~~~y~~~i 488 (491)
|++.+..+....-.+...+|-.++|.....+..-++.++ .--+++.+ ....-+.+.+-|+|+=++.+
T Consensus 342 ~~rl~aT~~~v~~~~~~g~~~~i~s~~~G~l~D~~G~~~---ty~il~~i---~l~~tiis~f~l~~~~~~~~ 408 (413)
T pfam01306 342 DVRLSATIYLIGFQFSKQLAMILLSTLAGIMYDSIGFQG---AYLVLGGI---VLSFTLISVFTLSGSGPQIL 408 (413)
T ss_pred CCHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH---HHHHHHHHHEEECCCCCCCC
T ss_conf 930221499999999998889986112888999703789---99999999---99999998326658996511
No 6
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.56 E-value=9.6e-09 Score=86.77 Aligned_cols=381 Identities=12% Similarity=0.120 Sum_probs=209.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 2327999999999999999999998778865124854--46799999999999999999999996338999999999999
Q gi|254780323|r 25 EAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGAE--IISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFF 102 (491)
Q Consensus 25 E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e--~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f 102 (491)
...-.+.+..--|+...++...=|.=--...+..|.+ .+=.+-. ..-.+.....+.-++++||++|+++...-...+
T Consensus 8 ~~~~~w~L~~~~~l~~lG~~mv~Pfl~iyl~~~lg~s~~~iGlil~-~~~l~~~~~~~~~G~LsDR~GrK~vii~gl~~~ 86 (400)
T PRK11646 8 RNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALG-LRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMR 86 (400)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 7226799999999999999999999999998607998899999999-999999999861468888618819999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 99999999998421001465234555531010134457876555799999999999999999999999998640989989
Q gi|254780323|r 103 VSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEAT 182 (491)
Q Consensus 103 ~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaK 182 (491)
++.++.+++.- +.|...+..+...+-+.+.-. .-=++..|.++++|-+
T Consensus 87 a~~~~~~a~a~-------------------------------s~~~l~~~~~l~G~g~~~~~p-a~~Aliad~t~~~~R~ 134 (400)
T PRK11646 87 AAGFATMGIAH-------------------------------EPWLLWFSCILSGLGGTLFDP-PRSALVIKLIRPQQRG 134 (400)
T ss_pred HHHHHHHHHHC-------------------------------CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCHHHHH
T ss_conf 99999999973-------------------------------599999999999998564679-9999999708876899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999998999999998899999963012322489999999999999999999998402452233200001123457888
Q gi|254780323|r 183 RFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSV 262 (491)
Q Consensus 183 Rlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (491)
|.|++.+.+.|+|..+|+.+...+.+..-. .. ....+....... .......++. +.++.+.+.
T Consensus 135 ~~f~l~~~a~niG~~iGpllGg~l~~~~~~--~~----f~~~a~~~~l~~--~~~~~~~p~~---------~~~~~~~~~ 197 (400)
T PRK11646 135 RFFSLLMMQDSAGAVIGALLGSWLLQYDFR--LV----CATGAVLFVLAA--AFNAWLLPAY---------KLSTVRTPV 197 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH----HHHHHHHHHHHH--HHHHHHCCCC---------CCCCCCCCH
T ss_conf 999999999999999999999999986489--99----999999999999--9999957866---------666667636
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q ss_conf 99999983096799999999999999999999999999983299899999999999999999999999-97899997316
Q gi|254780323|r 263 LESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMI-LGSNILKSFRW 341 (491)
Q Consensus 263 ~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~ql-l~~~ll~r~G~ 341 (491)
.++++.+.++|.+.........+.....-.+...-...++...+++ ..|..+...+++.++.|. +..+.-||++.
T Consensus 198 ~~~~~~vl~dr~f~~~~l~~~~~~~~~~q~~~~lpl~~~~~~~~~~----~~g~l~~~~~~v~v~lq~pl~~~~~kr~~~ 273 (400)
T PRK11646 198 REGMTRVLRDKRFVTYVLTLAGYYMLAVQVMLMLPIMVNDIAGSPS----AVKWMYAIEACLSLTLLYPIARWSEKRFRL 273 (400)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 7789999726889999999999999999999999999998558789----999999999999999999999999985472
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC-CHHHH
Q ss_conf 78999999999999999999984101234666787300207999999999999999876344646687775226-97673
Q gi|254780323|r 342 FTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPL-DDEFR 420 (491)
Q Consensus 342 ~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl-~~~~R 420 (491)
+..+.+- .++.+.+++.....+.... +.....+- ..-..+..|+.+.+-..+ |++.|
T Consensus 274 ~~~l~~G---~~l~~~g~~~~~~~~~~~~-----------~~i~~~lf--------tiGe~l~~P~~~s~va~lap~~~r 331 (400)
T PRK11646 274 EHRLMAG---LLIMSLSMFPIGMVSNLQQ-----------LFTLICLF--------YIGSIIAEPARETLSASLADARAR 331 (400)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHH-----------HHHHHHHH--------HHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 9999999---9999999999999988999-----------99999999--------999999975489999983896543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Q ss_conf 6577767888764667779999999999830000233379999999999----99999999997089
Q gi|254780323|r 421 TKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCL----MFIWIYVVNQLSKE 483 (491)
Q Consensus 421 ~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i----~~~Wi~~~~~L~~~ 483 (491)
.++.++. .....+|...|.++...+...... ......|+.....+.+ ...|...-.++.|+
T Consensus 332 G~y~G~~-~~~~~lG~~~Gp~~gG~L~d~~~~-~~~p~~~W~~~~~~~~l~~~~l~~~~~~~~~~~~ 396 (400)
T PRK11646 332 GSYMGFS-RLGLALGGAIGYIGGGWLFDLGKA-LHQPELPWMMLGIIGIITLLALGWQFSQKRIARR 396 (400)
T ss_pred EHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 2376299-999999999889899999955302-4898579999999999999999999989999865
No 7
>PRK10054 putative MFS-type transporter YdeE; Provisional
Probab=99.54 E-value=1.5e-08 Score=85.21 Aligned_cols=352 Identities=9% Similarity=0.104 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 3279999999999999999999987788651248--54467999999999999999999999963389999999999999
Q gi|254780323|r 26 AKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMG--AEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFV 103 (491)
Q Consensus 26 ~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g--~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~ 103 (491)
++...-+..--|+...++...=|.---...+..| +...=.+-. ....++.+....-+++.||++|+++...-...++
T Consensus 6 ~~~~~~Ll~~~~l~~~g~~~~~Pfl~iYl~~~~gls~~~vG~il~-~~~~~~~~~~l~gG~L~DR~Grk~v~l~g~~~~a 84 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMT-IALTIGVVFSLGFGILADKFDKKRYMLLAITAFA 84 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 888899999999999999999999999999862998899999999-9999999988520144663284499999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 99999999984210014652345555310101344578765557999999999999999999999999986409899899
Q gi|254780323|r 104 SFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATR 183 (491)
Q Consensus 104 ~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKR 183 (491)
+.+..+++. -+.|...+++...++-+++.-. .-=+...|..++||.+|
T Consensus 85 ~~~~~l~~~-------------------------------~~~~~~~l~~~l~g~~~~~~~p-a~~A~iaD~~~~~~R~~ 132 (395)
T PRK10054 85 SGFIAIPLV-------------------------------NNVTLVVLFFALINCAYSVFST-VLKAWFADNLSSTSKTK 132 (395)
T ss_pred HHHHHHHHH-------------------------------HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCHHHHHH
T ss_conf 999999999-------------------------------8899999999999999998999-99999984388778989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 99999989999999988999999630123224899999999999999999999984024522332000011234578889
Q gi|254780323|r 184 FYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVL 263 (491)
Q Consensus 184 lf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (491)
.|++...+.|+|..+|+.+...+....... .+...... ..+....+..+..+ + +.. .+++++...
T Consensus 133 ~f~l~y~~~NlG~aiGpllGg~l~~~~~~~--~F~~~a~~-~~~~~~~i~~~~~~----~-~~~----~~~~~~~~~--- 197 (395)
T PRK10054 133 IFSLNYTMLNIGWTVGPPLGTLLVMQSINL--PFWLAAIC-SAFPLVFIQIWVKR----S-EKA----IATETASVW--- 197 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHH-HHHHHHHHHHHHHC----C-CCC----CCCCCCCCC---
T ss_conf 999999999999999999999999965118--99999999-99999999999714----5-666----445556667---
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999830967999999999999999999999999999832998999999999999999999999999789999731678
Q gi|254780323|r 264 ESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFT 343 (491)
Q Consensus 264 ~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~ 343 (491)
+.|.+.|+|.+....+..++......-.+...-.+.... .+.+.-.+.+|.....+++..+++|....+..+|.+.+.
T Consensus 198 -~~~~~l~dr~~~~~~~~~~l~~~~~~q~~~~l~~~~~~~-~~~~~~~~~~~~l~~~N~v~Vv~lq~~v~r~~~~~~~~~ 275 (395)
T PRK10054 198 -SPKVLLRDKALLWFTCSGFLASFVSGAFASCISQYVMVV-ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRP 275 (395)
T ss_pred -CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf -731552250179999999999999999999988999998-114650989999999999999998999999985168159
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-EECCHHHHHH
Q ss_conf 999999999999999999984101234666787300207999999999999999876344646687775-2269767365
Q gi|254780323|r 344 SAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAF-IPLDDEFRTK 422 (491)
Q Consensus 344 ~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~-~pl~~~~R~k 422 (491)
.+.+- .+..+.++..+....+.... +.....+.++. -.+.-|+...+- .--|++.|.+
T Consensus 276 ~l~~G---~ll~~~g~~~~~~~~~~~~~----------~~i~~~ifTiG--------E~i~~P~~~~~v~~laP~~~RG~ 334 (395)
T PRK10054 276 LMTAG---TLCFVIGLVGFIFSGNNLLF----------WGMSAAVFTVG--------EIIYAPGEYMLIDNIAPPGMKAS 334 (395)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHH--------HHHHHCCHHHHHHHHCCCCCCHH
T ss_conf 99999---99999999999998778999----------99999999999--------99986559999987399340325
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7776788876466777999999999983
Q gi|254780323|r 423 GKAVVDVIGGRMAKSGGAVIQSFIFMLF 450 (491)
Q Consensus 423 ~K~~iD~~~~r~Gk~~gs~~~~~l~~~~ 450 (491)
+.++ -++.. .|...|-++...+...+
T Consensus 335 Y~g~-~sl~~-lG~~igP~~gG~ll~~~ 360 (395)
T PRK10054 335 YFSA-QSLGW-LGAAVNPLVSGVILTTL 360 (395)
T ss_pred HHHH-HHHHH-HHHHHHHHHHHHHHHHH
T ss_conf 8989-99999-99999999999999872
No 8
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter; InterPro: IPR001927 It has been shown that integral membrane proteins that mediate the intake of a wide variety of molecules with the concomitant uptake of sodium ions (sodium symporters) can be grouped, on the basis of sequence and functional similarities into a number of distinct families. This collection of sequences represents the sodium: galactoside symporter family (SGF). Like sugar transport proteins, these integral membrane proteins are predicted to comprise twelve membrane spanning domains. ; GO: 0005215 transporter activity, 0006814 sodium ion transport, 0016020 membrane.
Probab=99.53 E-value=8e-10 Score=95.28 Aligned_cols=382 Identities=14% Similarity=0.098 Sum_probs=212.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCC--CHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHH
Q ss_conf 9999999999999998778865124--8544679---9999999999999999999996338---999999999999999
Q gi|254780323|r 34 LMMFLVLFNFSTLRPIKDSLVVPHM--GAEIISF---VKLWCVFPSAILFTILYMKLSNILE---TEKLFYVVVSFFVSF 105 (491)
Q Consensus 34 ~~~F~i~~~y~~lr~~rd~l~~~~~--g~e~lp~---l~~~~~l~~s~~~~~~y~~l~~~~~---~~~l~~~~~~~f~~~ 105 (491)
-.+++=..+-|++.=.-|-++++.. |++.+=- +++ ++=..-...=|+-+.++||-+ |.-=|+=-..+-+..
T Consensus 11 ~~~~f~~v~~YL~~fyTDv~G~~a~~~G~n~~iLiTtlfl-V~Ri~dAi~DP~~G~~vD~T~~I~rwGKFRPw~L~Ga~p 89 (470)
T TIGR00792 11 NNFIFAIVSTYLLFFYTDVLGLSAAIVGANKLILITTLFL-VARILDAITDPIMGLIVDRTRNITRWGKFRPWLLIGAIP 89 (470)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHH
T ss_conf 8999999999999988621568431123453267899999-999999983346756752445888796433000201789
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHH
Q ss_conf 999999984210014652345555310101344578765557999999999999999999999999986409-8998999
Q gi|254780323|r 106 FAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITK-TEEATRF 184 (491)
Q Consensus 106 ~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~-~~qaKRl 184 (491)
+.++..+++-+++..+....-. ..-..++-|+.-++.=+++ .+=|||+.-.+++ +||-.++
T Consensus 90 ~~~~~vL~F~~~~~~~~~n~~~-----------------~~v~a~~tYi~~g~~Ys~~-niPy~sl~p~~T~d~~ER~~l 151 (470)
T TIGR00792 90 FAIVLVLLFTTPDFSATGNPIG-----------------KLVYAYITYILLGLFYSFV-NIPYWSLVPAITLDPRERESL 151 (470)
T ss_pred HHHHHHHHHHCCCCCCCCHHHH-----------------HHHHHHHHHHHHHHHHHHH-CCCCCCHHHHCCCCCCCCEEH
T ss_conf 9999999982457554311778-----------------9999999999984662210-136210354325783100212
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCC------CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999989999999988999999630123------2248999999999999999999999840245223320000112345
Q gi|254780323|r 185 YATFGLVGNVGLIFAGGIVKTFSKLTNE------LMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKL 258 (491)
Q Consensus 185 f~li~~g~~ig~i~gg~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (491)
-+.=..++++|+.+.+..+-++....+. ...-......+++.+..+... -.....+++...++.++++++
T Consensus 152 ~~~r~~~a~~G~~~~~~~~~P~~~~~~~~~~~~~~~~G~~~~~~i~~~~g~~~~~----~c~~~tkE~~~~~~~~~~~~~ 227 (470)
T TIGR00792 152 STFRRFGATLGGLLVAVIVLPLVSYFGGISAGEDDKLGWFMFALILALIGVVLLI----ICFFGTKERVSVSEIPKKSEK 227 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH----HHHCCCCCEEECCCCCCCCCC
T ss_conf 0187899999999999999999986066546888850589999999999999999----871677321310332113567
Q ss_pred CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78889999998309679999999999999999999999999998329989999999999999999999999997899997
Q gi|254780323|r 259 KLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKS 338 (491)
Q Consensus 259 ~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r 338 (491)
+.++++.+|.+.||+.|+.++++.+++.+..+..--..-.+.+-- -++.+.-++++.+.. ....++-..+.|++.+|
T Consensus 228 ~~~~~~~~~~l~~N~qL~~l~~~~l~~~~a~~i~~~~~~YYf~Yv-lg~~~lf~~~~~~~~--~~~~l~~~~l~P~l~k~ 304 (470)
T TIGR00792 228 KLSLKKIFKALFKNDQLLILCLAYLFYLLAFNIKNGVQVYYFTYV-LGDPELFSILGLIAF--IGAGLIGVLLFPRLVKK 304 (470)
T ss_pred CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE-ECCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
T ss_conf 786899999985288899999999999999998765630234577-466789999999999--99999999878778876
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
Q ss_conf 31678999999999999999999984-101234-6667873002079999999999999998763446466877752269
Q gi|254780323|r 339 FRWFTSAIITPLMILITGGGFFVFVI-FEDALL-PFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLD 416 (491)
Q Consensus 339 ~G~~~~l~i~Pi~~li~~~~ff~~~~-~~~~~~-~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~ 416 (491)
+|-+......-++.+++...++.... .+.... ..........++...+..+.-...+..+.||+=.|..+
T Consensus 305 ~grk~~~~~~~~~~~~g~l~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~w~~~vi~~~D~VdYGE~k~G~-------- 376 (470)
T TIGR00792 305 FGRKRLFLIGILLMVLGLLILFFVGKASNLPLILVLIIIAGFGQNFVTGLVWALQVIMVADTVDYGEWKTGV-------- 376 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHCCCCC--------
T ss_conf 125999999999999999999873167799999999999988776778987888864420232210201485--------
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 76736577-7678887646677799999999998300
Q gi|254780323|r 417 DEFRTKGK-AVVDVIGGRMAKSGGAVIQSFIFMLFPM 452 (491)
Q Consensus 417 ~~~R~k~K-~~iD~~~~r~Gk~~gs~~~~~l~~~~~~ 452 (491)
|..+= --+-++..|+|-++|+++-...+...+.
T Consensus 377 ---R~Eg~~~S~~~f~~K~G~A~~g~~~G~~L~~~GY 410 (470)
T TIGR00792 377 ---RAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 410 (470)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf ---5079999999999999889989999999997277
No 9
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.50 E-value=3e-08 Score=82.85 Aligned_cols=403 Identities=12% Similarity=0.109 Sum_probs=186.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999877886512485446799999999999999999999996----33899999999999999999999
Q gi|254780323|r 35 MMFLVLFNFSTLRPIKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKLSN----ILETEKLFYVVVSFFVSFFAIFA 110 (491)
Q Consensus 35 ~~F~i~~~y~~lr~~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~----~~~~~~l~~~~~~~f~~~~~~f~ 110 (491)
.+..-..+.+++-=.-|.+.++..-+.. +.+ .+-..-.+.-|+.+.+++ |++|+|-+-... ...+.+..
T Consensus 19 ~~~~~~~~~fl~~fyTdv~Gl~~~~~g~---i~~-i~ri~DAitDPi~G~isDrt~tr~GrrrP~il~g---~i~~~i~~ 91 (473)
T PRK10429 19 DFAIGIVYMYLMYYYTDVVGLSVGLVGT---LFL-VARIWDAINDPIMGWIVNATRSRWGKFKPWILIG---TLANSIVL 91 (473)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHH---HHH-HHHHHHHHHCCHHEEEHHCCCCCCCCCCHHHHHH---HHHHHHHH
T ss_conf 7999999999999999861988999999---999-9999999343333250106899888845899889---89999999
Q ss_pred HHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHH
Q ss_conf 9984210014652345555310101344578765557999999999999999999999999986409-899899999999
Q gi|254780323|r 111 FLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITK-TEEATRFYATFG 189 (491)
Q Consensus 111 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~-~~qaKRlf~li~ 189 (491)
.+++..++ .. ... .-.|....+-++.=.+..+.+. ++++..+.++ .+|-.++.+.=.
T Consensus 92 ~llf~~~~-~~-----------------~~~--~~~~~~~~yil~~~~yT~~~vP--y~aL~~elT~D~~ERt~l~~~R~ 149 (473)
T PRK10429 92 FLLFSAHL-FE-----------------GTA--QIVFVCVTYILWGMTYTIMDIP--FWSLVPTITLDKREREQLVPYPR 149 (473)
T ss_pred HHHHCCCC-CC-----------------HHH--HHHHHHHHHHHHHHHHHHEECC--CCCCHHHHCCCHHHHHHHHHHHH
T ss_conf 99974878-65-----------------069--9999999999999999841563--00000343068888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 8999999998899999963012322--48999999999999999999999840245223320000112345788899999
Q gi|254780323|r 190 LVGNVGLIFAGGIVKTFSKLTNELM--IYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLR 267 (491)
Q Consensus 190 ~g~~ig~i~gg~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 267 (491)
.++++|+++.+.....+....+... ..+.....+.+.+.+... ..... ..++...+++.+++++++.+++|.++
T Consensus 150 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~i~~-~~~~~---~~~e~~~~~~~~~~~~~~~~l~~~~~ 225 (473)
T PRK10429 150 FFASLAGFVTAGVTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVST-IVTLR---NVHEVYSSDNGVSAEGSHLTLKDIVA 225 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHH---HCEECCCCCCCCCCCCCCCCHHHHHH
T ss_conf 999999999999999999660698565899999999999999999-99997---02012455445555556878999999
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98309679999999999999999999999999998329989999999999999999999999997899997316789999
Q gi|254780323|r 268 MALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAII 347 (491)
Q Consensus 268 ~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i 347 (491)
.++|||.++.+....++..+..++.........+....+++. . +.+.....+.+++...+.+++.+|+|-+....+
T Consensus 226 ~l~~N~~~~~l~~~~l~~~~~~~i~~~~~~Yy~~y~lg~~~~-~---~~~~~~~~i~~ii~~~~~~~l~kk~gKk~~~~~ 301 (473)
T PRK10429 226 LIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADL-F---PYYLSYAGAANLVTLILFPRLVKLLSRRILWAG 301 (473)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 997265999999999999999999999999999999078889-9---999999999999999999999999728999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHH-
Q ss_conf 9999999999999998410123466678730020799999999999999987634464668777522697673657776-
Q gi|254780323|r 348 TPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRTKGKAV- 426 (491)
Q Consensus 348 ~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~- 426 (491)
.-...+++...++...+..+..... ......+.. .-.+......-....-+-+....|.-.-
T Consensus 302 ~~~~~~l~~~~~~~~~~~~~~~~~l------------~~i~~~~~~-----~g~~~~~~l~~sm~aDvvDy~E~ktG~R~ 364 (473)
T PRK10429 302 ASIFPVLSCGVLLLMALAAPHNALL------------IVLAGILLN-----IGTALFWVLQVIMVADTVDYGEYKLGIRC 364 (473)
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHH------------HHHHHHHHH-----HHHHHHHHHHHHHHCCCCHHHHHHHCCCH
T ss_conf 9999999999999999805004999------------999999999-----98889999999983150038898828841
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHHH--------HHHHHHH-HHHHH-HHHHHHHHHHHHHHH
Q ss_conf ------7888764667779999999999830000-23337999--------9999999-99999-999997089999853
Q gi|254780323|r 427 ------VDVIGGRMAKSGGAVIQSFIFMLFPMAT-FSSIVPYL--------AVFFLCL-MFIWI-YVVNQLSKEYTQLIS 489 (491)
Q Consensus 427 ------iD~~~~r~Gk~~gs~~~~~l~~~~~~~~-~~~~~~~~--------~~~~i~i-~~~Wi-~~~~~L~~~y~~~i~ 489 (491)
+-++..|+|-++|+.+....+...+... ..++...+ .+..+.. +...+ +.-++|.+|.++.++
T Consensus 365 eG~~~s~~sf~~K~~~al~~~i~g~~L~~~Gy~~~~~Qs~~al~~i~~~~~~iP~~~~~i~~~~~~~fY~L~~~~~~eI~ 444 (473)
T PRK10429 365 ESIAYSVQTMVVKGGSAFAAFFIAVVLGMIGYVPNVEQSAQTLLGMQFIMIALPTLFFMITLVLYFRYYRLNGDMLRKIQ 444 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHH
T ss_conf 87999999999999999999999999998087989889999999999999999999999999999970308899999999
Q ss_pred CC
Q ss_conf 49
Q gi|254780323|r 490 KE 491 (491)
Q Consensus 490 ~~ 491 (491)
+|
T Consensus 445 ~~ 446 (473)
T PRK10429 445 IH 446 (473)
T ss_pred HH
T ss_conf 99
No 10
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.49 E-value=3.3e-08 Score=82.54 Aligned_cols=391 Identities=11% Similarity=0.135 Sum_probs=202.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 3279999999999999999999987788651--24854467999999999999999999999963389999999999999
Q gi|254780323|r 26 AKKFIPMTLMMFLVLFNFSTLRPIKDSLVVP--HMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFV 103 (491)
Q Consensus 26 ~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~--~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~ 103 (491)
-|..+.+.+++|+--+++.+.-|.=-.-.-+ ..+++.+-.+.. .....+++..|+++.+.||.+.+|-.-.+...-.
T Consensus 7 ~~~y~~~s~~yf~yF~~~g~~~pf~~vwL~~~~Gls~~qIGli~s-~~~~~~l~~~p~~G~lsDk~g~~k~ll~~~~~~~ 85 (418)
T PRK09528 7 NPNYWLFSLFFFFFFFIWSSYFSFFPIWLHDINGLSKTDTGIIFS-AISLFALLFQPLYGVISDKLGLKKYLLWIISGLL 85 (418)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 832999999999999999999999999967678989999999999-9999999998889997420241278999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHCCHHH
Q ss_conf 9999999998421001465234555531010134457876555799999999999999999999999---9986409899
Q gi|254780323|r 104 SFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQ---FANRITKTEE 180 (491)
Q Consensus 104 ~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~---~~n~~f~~~q 180 (491)
.....+....+ . + ..-.+.|... +.+.+.++. +|+ =..|....+.
T Consensus 86 ~~~~~~f~~vf--~---------------------p-ll~~~~~lg~-------~~~~i~~~~-~~~a~~pl~ds~~~~~ 133 (418)
T PRK09528 86 VLFGPFFIYVF--A---------------------P-LLQYNILVGA-------IVGGIYLGF-GFNAGAGAIEAYIEKV 133 (418)
T ss_pred HHHHHHHHHHH--H---------------------H-HHHHHHHHHH-------HHHHHHHHH-HHCCCCCHHHHHHHHH
T ss_conf 99999999999--9---------------------9-9999999999-------999999999-8734663899999999
Q ss_pred HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 899---99999989999999988999999630123224899999999999999999999984024522332000011234
Q gi|254780323|r 181 ATR---FYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKK 257 (491)
Q Consensus 181 aKR---lf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (491)
++| =||-+=.-|++|-+++...+..+.+.......+.... ++++...+... ....+++....++.++.++
T Consensus 134 s~~~~~~YG~iRlwGSiGfavas~~~G~l~~~~~~~~f~~~s~----~~li~~~ll~~---~~~~~~~~~~~~~~~~~~~ 206 (418)
T PRK09528 134 SRNSGFEYGRARMFGSLGWALCAFFAGILFNINPQINFWLGSG----CALILAVLLFF---AKPDAPSTATVANAVGANP 206 (418)
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH----HHHHHHHHHHH---HCCCCCCCCCCCCCCCCCC
T ss_conf 8775897624789999999999999889876173289999999----99999999998---4676532210000001466
Q ss_pred CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 57888999999830967999999999999999999999999999832998999999999999999999999999789999
Q gi|254780323|r 258 LKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILK 337 (491)
Q Consensus 258 ~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~ 337 (491)
.+.+.++-. .++|+|-.....+++.......+..|.++-......+++++.-++.+|.........-+.++++.+++++
T Consensus 207 ~~~~~~~~~-~llk~~~~~~f~l~~~~~~~~~~~~d~~f~~f~~~~~~~~~~g~~~~G~l~s~gv~~Ei~~m~~~~~l~~ 285 (418)
T PRK09528 207 SAVSLKDAL-ALFKLPKFWFLVLYVIGVACIYDVFDQQFPNFFASFFATHEQGTRVFGYLNSFQVFLEALIMFFAPLIIN 285 (418)
T ss_pred CCCCHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 887799999-9836749999999999999999999988889999997701667136769999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHEECC
Q ss_conf 7316789999999999999999999841012346667873002079999999999999998763446-466877752269
Q gi|254780323|r 338 SFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMF-DSTKEMAFIPLD 416 (491)
Q Consensus 338 r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~-~p~~E~l~~pl~ 416 (491)
|+|.+..+.+.-++..+= ........+.. .+ ...+. ..+.++++. =++.+-...-.|
T Consensus 286 r~g~k~~Llla~~~~~lR---w~~~~~~~~~~---------------~i---~~~ql-LHa~tf~l~~~a~~~yI~~~~~ 343 (418)
T PRK09528 286 RIGAKNALLLAGTIMAVR---IIGSAFATNAL---------------EV---SILKL-LHAFEVPFLLVGIFKYITSNFD 343 (418)
T ss_pred HCCHHHHHHHHHHHHHHH---HHHHHHCCCHH---------------HH---HHHHH-HHHHHHHHHHHHHHHHHHHHCC
T ss_conf 608099999999999999---99863001389---------------99---99999-9999999999999999998588
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 767365777678887646677799999999998300002333799999999999999999999708999
Q gi|254780323|r 417 DEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVNQLSKEYT 485 (491)
Q Consensus 417 ~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~~~~L~~~y~ 485 (491)
++.+..+....-.+...+|-.++|.....+...++. +..--+.+++ .+..-+.+++-|+++=+
T Consensus 344 ~~l~aT~~~v~~~~~~gl~~~i~s~~~G~lyD~~G~---~~~y~~~g~i---~~~~tlis~f~l~~~~~ 406 (418)
T PRK09528 344 VRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGF---QDTYLVLGLI---VLGFTLISAFTLSGKRP 406 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH---HHHHHHHHHHHHCCCCC
T ss_conf 888999999999999999999974206889998445---7999999999---99999999997357886
No 11
>pfam07690 MFS_1 Major Facilitator Superfamily.
Probab=99.43 E-value=8e-08 Score=79.50 Aligned_cols=333 Identities=14% Similarity=0.136 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999998778865124--85446799999999999999999999996338999999999999999999999
Q gi|254780323|r 34 LMMFLVLFNFSTLRPIKDSLVVPHM--GAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAF 111 (491)
Q Consensus 34 ~~~F~i~~~y~~lr~~rd~l~~~~~--g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~ 111 (491)
+..|....+-....|.-.....+.. +++.+.++.....+ ...+..+..+++.||++||+.+......+.+...+.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~ig~~~s~~~~-~~~i~~~~~G~l~Dr~g~k~~~i~~~~~~~i~~~~~~~ 81 (345)
T pfam07690 3 LAAFLAGLGRSLLGPALPLYLAEDLGISPTEIGLLLTAFSL-GYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLF 81 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999998839899999999999999-99999999999999909699999999999999999999
Q ss_pred HHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 98421001465234555531010134457876555799999999999999999999999998640989989999999989
Q gi|254780323|r 112 LLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATFGLV 191 (491)
Q Consensus 112 ~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g 191 (491)
. -+.|..........+....... ..-+++.|.++.+|-.|.++....+
T Consensus 82 ~-------------------------------~~~~~~~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~ 129 (345)
T pfam07690 82 A-------------------------------SSLWLLLVLRVLQGLGGGALFP-AAAALIADWFPPEERGRALGLLSAG 129 (345)
T ss_pred H-------------------------------CCHHHHHHHHHHHHHHHHCCHH-HHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 7-------------------------------5799999999998702210008-9999998408999999999999886
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
Q ss_conf 99999998899999963012322489999999999999999999998402452233200001123457888999999830
Q gi|254780323|r 192 GNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALN 271 (491)
Q Consensus 192 ~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~ 271 (491)
.++|.++|+.+...+.+..+-............ .+..... . ....++++.+.+.+ ++.+.......+...+
T Consensus 130 ~~ig~~ig~~i~~~l~~~~~~~~~f~~~~~~~~---i~~i~~~-~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 200 (345)
T pfam07690 130 FGLGAALGPLLGGLLASLFGWRAAFLILAILAL---LAAVLAA-L--LLPRPPPESKRPKP---AEEAPAPLVPWKLLLR 200 (345)
T ss_pred HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH-H--HHCCCCCCCCCCCH---HHHHCCCHHHHHHHHH
T ss_conf 024543124899999970148899999999999---9999999-9--94888532223430---2220120235999875
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 96799999999999999999999999999983299899999999999999999999999978999973167899999999
Q gi|254780323|r 272 SKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLM 351 (491)
Q Consensus 272 s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~ 351 (491)
.+....+... .......+...........+..-++.+. +......++..++.+++.+++.+|+|.+....+.-..
T Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 275 (345)
T pfam07690 201 DPVLWLLLAL-LLFGFAFFALFTYLPLYQEVLGLSALLA----GLLLGLAGLLGAIGRLLLGRLSDRLGRRRRLLLALLL 275 (345)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 7999999999-9999999999999999999809988999----9999999999999999999999990737999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHH
Q ss_conf 99999999999841012346667873002079999999999999998763446466877752269767365777678887
Q gi|254780323|r 352 ILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIG 431 (491)
Q Consensus 352 ~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~ 431 (491)
..+...++......+... ..+.+ ..+.-...-....+.......-.|+|.|.++-+....+.
T Consensus 276 ~~i~~~~~~~~~~~~~~~---------------~~~~~---~~i~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 337 (345)
T pfam07690 276 LILAALGLALLSLTESSL---------------WLLVA---LLLLGFGAGLVFPALNALASDLAPKEERGTASGLYNTAG 337 (345)
T ss_pred HHHHHHHHHHHHHHHHHH---------------HHHHH---HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 999999999998612199---------------99999---999999999999999999998789989999999999999
No 12
>PRK03545 sugar efflux transporter; Provisional
Probab=99.43 E-value=8.6e-08 Score=79.27 Aligned_cols=385 Identities=10% Similarity=0.061 Sum_probs=213.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 811232799999999999999999999877886512-4854467999999999999999999999963389999999999
Q gi|254780323|r 22 KMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPH-MGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVS 100 (491)
Q Consensus 22 ~~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~-~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~ 100 (491)
|+--|-+++.+....|.+...-++.-++=+.+.-+- ...+..-.+-....+.. .+..+..+.+.+|++||++......
T Consensus 4 ~~~~w~~v~~L~~~~F~~~~~e~~~~glLp~ia~dl~vs~~~aG~lvt~yal~~-ai~~p~~~~l~dr~~Rr~~ll~~l~ 82 (390)
T PRK03545 4 RKVAWLRVVALALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVV-ALMSLPFMLLTSQVERRKLLLGLFV 82 (390)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 545579999999999999988998997179999782999999999999999999-9999999999701684999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 99999999999984210014652345555310101344578765557999999999999999999999999986409899
Q gi|254780323|r 101 FFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEE 180 (491)
Q Consensus 101 ~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~q 180 (491)
.|++.-.+.++-- +.|..-..=+...+-.....+.. -+++.|.+.+++
T Consensus 83 ~f~~~~~l~a~a~-------------------------------s~~~Ll~~R~l~Gi~~a~~~~~a-~a~~~~l~p~~~ 130 (390)
T PRK03545 83 LFIASHVLSGLAW-------------------------------SFTVLLISRIGIAFAHAVFWSIT-ASLAIRVAPAGK 130 (390)
T ss_pred HHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCHHH
T ss_conf 9999999999976-------------------------------39999999999861038888889-999999778555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999999989999999988999999630123224899999999999999999999984024522332000011234578
Q gi|254780323|r 181 ATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKL 260 (491)
Q Consensus 181 aKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (491)
..|-.+.+..|-++|.++|..+...+.+..+=..... .....+..+.. ......++.++++ +.
T Consensus 131 rg~a~g~v~~G~slg~vlG~plg~~l~~~~gWr~~F~---~~~vl~~~~~l---~~~~~lP~~~~~~-----------~~ 193 (390)
T PRK03545 131 KAQALSLLATGTALAMVLGLPLGRVVGQALGWRTTFL---AIGGVALITLL---LLIKLLPLLPSEN-----------SG 193 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH---HHHHHHHHHHH---HHHHHCCCCCCCC-----------CC
T ss_conf 7789999999999999997644899988628089999---99999999999---9999778887767-----------76
Q ss_pred CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8899999983096799999999999999999999999-999983299899999999999999999999999978999973
Q gi|254780323|r 261 SVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWK-EKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSF 339 (491)
Q Consensus 261 ~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k-~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~ 339 (491)
+ .++...++++|-++......++..... +.-+.|. ...++...-+. +..+.....-++..++-..+.+|+.+|.
T Consensus 194 ~-~~~~~~~l~~~~ll~~~~~~~l~~~~~-f~~~~yi~p~l~~~~g~s~---~~~~~~l~~~Gia~~~g~~~~grl~dr~ 268 (390)
T PRK03545 194 S-LKSLPLLFRRPALVSLYLLTVVVVTAH-FTAYSYIEPFVQNVAGLSA---NFATALLLLFGGAGIIGSVLFSRLGNRH 268 (390)
T ss_pred C-HHHHHHHHCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 6-667999972889999999999999999-9999999999987059988---8999999999999999999999998842
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHH
Q ss_conf 16789999999999999999999841012346667873002079999999999999998763446466877752269767
Q gi|254780323|r 340 RWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEF 419 (491)
Q Consensus 340 G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~ 419 (491)
+-+...... ..+......+. .+.+.. ...... .+.=..-+....|+-|..-+.+.|+.
T Consensus 269 ~~~~~~~~~-~ll~~~~~~l~---~~~~~~--------------~~~~~~----~~l~g~~~~~~~~~~q~~~~~~ap~~ 326 (390)
T PRK03545 269 PSGFLLIAI-ALLLVCLLLLL---PAANSE--------------WHLSVL----SIFWGIAIMCIGLAMQVKVLKLAPDA 326 (390)
T ss_pred CCHHHHHHH-HHHHHHHHHHH---HHHHHH--------------HHHHHH----HHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 101999999-99999999999---988789--------------999999----99999999987899999999878896
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 365777678887646677799999999998300002333799999999999999999999708999985349
Q gi|254780323|r 420 RTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVNQLSKEYTQLISKE 491 (491)
Q Consensus 420 R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~~~~L~~~y~~~i~~~ 491 (491)
|..+-+.... ...+|-+.|+.+...+...++.. ....+...+....+.....+.|+|+....+|
T Consensus 327 ~~~a~al~~s-~~~lG~~lG~~lgG~~~~~~G~~-------~~~~~ga~~~~~al~~~~~~~Rr~r~~~~~~ 390 (390)
T PRK03545 327 TDVAMALFSG-IFNIGIGAGALLGNQVSLHLGLS-------SIGYVGAVLALAALVWAIFIFRRFRAVTLEE 390 (390)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 7899999999-99999999999999999822746-------8999999999999999999998864156789
No 13
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.34 E-value=2.9e-07 Score=75.09 Aligned_cols=376 Identities=9% Similarity=0.004 Sum_probs=190.1
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999996387811232799999999999999999999877886512-485446799999999999999999999996338
Q gi|254780323|r 12 LKIWQVFCAVKMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPH-MGAEIISFVKLWCVFPSAILFTILYMKLSNILE 90 (491)
Q Consensus 12 ~~l~~~~~~i~~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~-~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~ 90 (491)
.|+.+-+-++-|.++|.++...+-.++=.+-..+.-.....+--+. .++...-.+.. ..+....+-..+++++.||++
T Consensus 3 ~~~~~~~~~lt~~~~r~~~~a~~G~~~d~yD~~~~~~~~~~i~~~~~ls~~~~~~~~s-~~~~g~~iGa~i~G~laDr~G 81 (426)
T PRK12307 3 AKFFPWYSEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLAT-AAFIGRPFGGALFGLLADKFG 81 (426)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHC
T ss_conf 7762788858999999999999999999999999999999998655998889999999-999999999999999999755
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Q ss_conf 99999999999999999999998421001465234555531010134457876555799999999999--9999999999
Q gi|254780323|r 91 TEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAEL--WGAVMINLMF 168 (491)
Q Consensus 91 ~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~--~~~~vis~~F 168 (491)
|++.+-.....+.+.-.+.++.- + . |...++=....+ =+....+
T Consensus 82 Rk~~l~~sil~~~i~t~l~~~a~--~-------~----------------------~~l~i~R~l~Gig~Gg~~~~a--- 127 (426)
T PRK12307 82 RKPLMMWSIVAYSVGTGLSGLAS--G-------V----------------------IMLTLSRFIVGMGMAGEYACA--- 127 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHC--C-------H----------------------HHHHHHHHHHHCCCHHHHHHH---
T ss_conf 39999999999999999998623--1-------9----------------------999999999980134456689---
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99998640989989999999989999999988999999630123224899999999999999999999984024522332
Q gi|254780323|r 169 WQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYS 248 (491)
Q Consensus 169 W~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 248 (491)
..+++|....++..+.-+++..|.++|.++++.....+.+..+ +...- .+ +.....+..+.+...++.++..+
T Consensus 128 ~~~~~E~~p~~~Rg~~~~~~~~g~~~G~~la~~l~~~~~~~~G---WR~~F---~i-g~lp~ll~~~~r~~lpESp~~~~ 200 (426)
T PRK12307 128 STYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYG---WRAAF---FV-GLLPVLLVIYIRARAPESKEWEE 200 (426)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---HHHHH---HH-HHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 9999986741221999999999869999999999999855778---49999---99-99999999999982899877898
Q ss_pred CCCCC---CCCCCCCCHHHHHHHHHCCHHHHHHHHH-HHHHHHHH-HHHHHHH-HHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 00001---1234578889999998309679999999-99999999-9999999-99999832998999999999999999
Q gi|254780323|r 249 PKRGS---VKKKLKLSVLESLRMALNSKYLGYLVLL-VICYGTAI-NLVEGPW-KEKVRQLYPTQNSYAQFMGQFIQWTG 322 (491)
Q Consensus 249 ~~~~~---~~~~~~~~~~~~~k~i~~s~yL~~l~~~-v~~~~~~~-tl~e~~~-k~~~~~~~~~~~~~~af~g~~~~~v~ 322 (491)
.+.++ .+++.+.......+.+++.+++...... ...+.... +..-+.| ..+..+..-+..+... +....+
T Consensus 201 ~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~g~~~~~~~~----~~~~~~ 276 (426)
T PRK12307 201 AKLSGPGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSN----LMTAAA 276 (426)
T ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH----HHHHHH
T ss_conf 6644423223302666435699998876999999999999999999999999999999986998999999----999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999978999973167899999999999999999998410123466678730020799999999999999987634
Q gi|254780323|r 323 IVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYT 402 (491)
Q Consensus 323 i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYs 402 (491)
...++-..+.+++.+|+|-+.+..+.-+...+.....+... .... .+......+.. .... +
T Consensus 277 ~~~~~g~~~~g~l~DriGRr~~~~~~~i~~~i~~~~~~~~~----~~~~---------~~~~~~~~~~~---~~~~---g 337 (426)
T PRK12307 277 FGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIP----QDNY---------LLLGACLFGLM---ATNV---G 337 (426)
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH----HHHH---------HHHHHHHHHHH---HHHH---H
T ss_conf 99999999999999998769999999999999999999997----1389---------99999999999---9999---9
Q ss_pred HHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 464668777522697673657776788876466777999999999983000
Q gi|254780323|r 403 MFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMA 453 (491)
Q Consensus 403 l~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~ 453 (491)
..-+.--.+.---|.+.|..+-++.-.++ |+|-+.+..+...+...++.+
T Consensus 338 ~~~~~~~~~~ElfPt~vR~tg~G~~~~~g-rigg~~~P~i~~~L~~~~G~~ 387 (426)
T PRK12307 338 VGGLVPKFLYDYFPLEVRGLGTGLIYNLA-ATSGTFNSMAATWLGITMGLG 387 (426)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999998498989999999999999-999999999999999887945
No 14
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.33 E-value=3e-07 Score=74.92 Aligned_cols=388 Identities=10% Similarity=-0.011 Sum_probs=193.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 279999999999999999999987788651248-5446799999999999999999999996338999999999999999
Q gi|254780323|r 27 KKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMG-AEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSF 105 (491)
Q Consensus 27 ~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g-~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~ 105 (491)
|.+..+..-.++-..+..+.+..-.-++.+..| +...-.......+|. ++..+.-+.+++|++|||+.-..-..-.+.
T Consensus 17 r~Fr~l~~~~~~S~lG~~~~~iAl~~~v~~~TgS~~~~glv~~~~~lp~-ll~~~~~GvlaDR~~Rr~vmi~~~~~~~~~ 95 (416)
T PRK10489 17 PAFRAVFLARFISIVSLGLLGVAVPVQIQMMTHSTWQVGLSVTLTGGAM-FVGLMVGGVLADRYERKKVILLARGTCGIG 95 (416)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 2699999999999999999999999999988599999999999999999-999999999999448429999999999999
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 99999998421001465234555531010134457876555799999999999999999999999998640989989999
Q gi|254780323|r 106 FAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFY 185 (491)
Q Consensus 106 ~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf 185 (491)
........+. ...+.|.....-....+.+.+... ..-+...++..+||=.+-.
T Consensus 96 ~~~l~~~~~~--------------------------~~~~~~~l~~~~~l~g~~~a~~~p-A~~a~lp~lV~~~~L~~An 148 (416)
T PRK10489 96 FIGLCLNALL--------------------------PEPSLLAIYLLGLWDGFFASLGVT-ALLAATPALVGRENLMQAG 148 (416)
T ss_pred HHHHHHHHHH--------------------------CCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHH
T ss_conf 9999999981--------------------------734099999999999999888889-9999999844789899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 99998999999998899999963012322489999999999999999999998402452233200001123457888999
Q gi|254780323|r 186 ATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLES 265 (491)
Q Consensus 186 ~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (491)
++.+...+++.++|+.....+....+............+....+. . .....+. ..+++++...+.+||
T Consensus 149 al~~~~~~~~~iiGP~lgG~li~~~g~~~~~~i~a~~~~~s~~~l-----~--~l~~~~~-----~~~~~~~~~~~~~eG 216 (416)
T PRK10489 149 AITMLTVRLGSVISPMIGGLLLATGGVAWNYGLAAAGTFITLLPL-----L--RLPALPP-----PPQPREHPLRSLLAG 216 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-----H--HCCCCCC-----CCCCCCCHHHHHHHH
T ss_conf 999999999989864889999987133499999999999999999-----7--1877899-----988887547899999
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99983096799999999999999999999999999983299899999999999999999999999978999973167899
Q gi|254780323|r 266 LRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSA 345 (491)
Q Consensus 266 ~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l 345 (491)
++.+.++|.++.+.......+..... ...+-...++...++.+ +|......++-.++-.++.+++-++.+.....
T Consensus 217 ~r~l~~~~~l~~~~l~~~~~~~~~~~-~~l~p~~~~~l~~~~~~----~G~l~aa~gvG~llG~l~~~~~~~~~~~~~~~ 291 (416)
T PRK10489 217 FRFLLASPLVGGIALLGGLLTMASAV-RVLYPALADNWQMSAAQ----IGLLYAAIPLGAAIGALTSGWLAHSRRPGLLM 291 (416)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCHHH----HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 99998177999999999999999999-99999999980898789----99999999999999999999852456638999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HEECCHHHHHHHH
Q ss_conf 999999999999999998410123466678730020799999999999999987634464668777-5226976736577
Q gi|254780323|r 346 IITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMA-FIPLDDEFRTKGK 424 (491)
Q Consensus 346 ~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l-~~pl~~~~R~k~K 424 (491)
... ....+.....+... ++++.. .+...+. ..-.+..++..+.+ -..+|+|.|.|.-
T Consensus 292 ~~~---~~~~~~~~~~~~~~--------------~~~~~~----~~~~~~~-G~~~~~~~v~~~t~iQ~~~P~~~rGRV~ 349 (416)
T PRK10489 292 LLS---TLGSFLAIGLFGLM--------------PMWILG----VACLALF-GWLSAISSLLQYTLLQTQTPEAMLGRIN 349 (416)
T ss_pred HHH---HHHHHHHHHHHHHH--------------HHHHHH----HHHHHHH-HHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 999---99999999999861--------------599999----9999999-9999999999999999859999875999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76788876466777999999999983000023337999999999999999999997089999
Q gi|254780323|r 425 AVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVNQLSKEYTQ 486 (491)
Q Consensus 425 ~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~~~~L~~~y~~ 486 (491)
+.. ......+-.+|......+...++.. ...-......+.+..+|....-. -|+|++
T Consensus 350 s~~-~~~~~~~~plG~~~~G~la~~~G~~---~~~~~~g~~~~~~~~~~~~~~~~-~r~~~~ 406 (416)
T PRK10489 350 GLW-TAQNVTGDAIGAALLGGLGAMMTPV---ASASASGFGLAIIGVLLLLVLGE-LRRFRQ 406 (416)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCHH-HCCCCC
T ss_conf 999-9999998998999999999997789---99999999999999999997714-203789
No 15
>pfam03825 Nuc_H_symport Nucleoside H+ symporter.
Probab=99.33 E-value=3.1e-07 Score=74.91 Aligned_cols=336 Identities=13% Similarity=0.123 Sum_probs=170.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHH
Q ss_conf 48544679999999999999999999999633899999999999999999999998421001465234555531010134
Q gi|254780323|r 58 MGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYL 137 (491)
Q Consensus 58 ~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~ 137 (491)
.+++.+-.+..... ...++..++.++++||...+|-+..+........... .... .
T Consensus 34 fs~~qIG~i~a~~~-i~~iv~p~~wG~lADr~~~~~~vl~~~~~~~~~~~~~-~~~~-----------------~----- 89 (400)
T pfam03825 34 FAGAQIGLVYSSWG-IAAIVMPFLSGIIADRWFSAERVLAVCHLIGAVALFG-AAQV-----------------T----- 89 (400)
T ss_pred CCHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-HHHH-----------------C-----
T ss_conf 89999999999999-9999999999999834564789999999999999999-9985-----------------2-----
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
Q ss_conf 45787655579999999999999999999999999864098998999999998999999998899999963012322489
Q gi|254780323|r 138 KWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYY 217 (491)
Q Consensus 138 ~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~ 217 (491)
+.|.....++.-..+-+-+.+ +.=+.+-+.- ++.++-||.+=.-|++|-++++..........+.....
T Consensus 90 -------~f~~~~~~~~~~~~~~~p~lp-L~dsi~~~~l--~~~~~~Yg~iRlwGSiGfi~a~~~~g~~~~~~~~~~~~- 158 (400)
T pfam03825 90 -------TFWPFFAVYLVNSLAYMPTLA-LTNSIAFANL--RDPVTDFPPIRVGGTVGWILASWPFVMWLVSLATVELS- 158 (400)
T ss_pred -------CHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHH--CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH-
T ss_conf -------499999999999999835057-8999999971--27567787203576499999998899999995012056-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999840245223320000112345788899999983096799999999999999999999999
Q gi|254780323|r 218 SMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWK 297 (491)
Q Consensus 218 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k 297 (491)
.....+.+..+..+.... -.. |+.++++ +.+++..+....| ...++|+|.+.......++.+.....-+.-..
T Consensus 159 -~~~~~i~~~~~~ll~~~~-~~l---p~~p~~~-~~~~~~~~~~~~~-~~~lLk~~~~~~Fl~~~~l~~~~h~~yy~F~s 231 (400)
T pfam03825 159 -RWQLLIAAGVSALLAGYA-LTL---PHTPAKR-KADDSVDKLLGLD-AFKLLKNPRMAVFFVFSFLLGAILQIYNVFAN 231 (400)
T ss_pred -HHHHHHHHHHHHHHHHHH-HHC---CCCCCCC-CCCCCCHHHHHHH-HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -799999999999999999-738---8888766-5554200020257-99996591499999999999989999999899
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998329989999999999999999-99999999789999731678999999999999999999984101234666787
Q gi|254780323|r 298 EKVRQLYPTQNSYAQFMGQFIQWTGI-VTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDV 376 (491)
Q Consensus 298 ~~~~~~~~~~~~~~af~g~~~~~v~i-~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~ 376 (491)
.++++..-++.+.... -...++ .-+.+.++.++++||+|.+..+.+.-+... +=+..+++..++..
T Consensus 232 ~yl~~~gg~~~~~~~~----~~~lgvvaEI~~f~~~~~ll~r~g~~~lll~a~~~~~---lR~~l~a~~~~~~~------ 298 (400)
T pfam03825 232 AFLTNFVGFAVKLASI----VLSLGQVAEIIFMLTLPFFLKRFGIKVVMLVGVVAWA---LRFAFFAYGADPVP------ 298 (400)
T ss_pred HHHHHCCCCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH---HHHHHHHHCCCCHH------
T ss_conf 9999847726779999----9999999999999999999998489999999999999---99999994267403------
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 3002079999999999999998763446-466877752269767365777678887646677799999999998300002
Q gi|254780323|r 377 IKLVPLALAVFLGSLQNVLSKATKYTMF-DSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATF 455 (491)
Q Consensus 377 ~~~~~l~~~v~~~~i~~~~~k~~kYsl~-~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~ 455 (491)
.. ... .+......+..|+.+ -.+.+.+-...|++.|.++|+..-.+..-+|-.+|+.+...+...+...+.
T Consensus 299 -----~~--~~~-l~l~q~LHg~tfg~f~~a~~~~v~~~~p~~~ra~~Q~l~~~~~~G~g~~iG~~~~G~l~~~f~~~~~ 370 (400)
T pfam03825 299 -----FG--VAL-LLLSMIVHGVAYDFFNITGYIFVDKEVPKDIRASAQGLFNLMINGVGNVLGSILSGMLVGMFTTDGS 370 (400)
T ss_pred -----HH--HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf -----79--999-9999999999999999999999998688553879999999999708999999999999999706776
Q ss_pred H
Q ss_conf 3
Q gi|254780323|r 456 S 456 (491)
Q Consensus 456 ~ 456 (491)
.
T Consensus 371 ~ 371 (400)
T pfam03825 371 V 371 (400)
T ss_pred C
T ss_conf 8
No 16
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.20 E-value=1.4e-06 Score=69.71 Aligned_cols=352 Identities=9% Similarity=0.054 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 32799999999999999999999877886512-48544679999999999999999999999633899999999999999
Q gi|254780323|r 26 AKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPH-MGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVS 104 (491)
Q Consensus 26 ~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~-~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~ 104 (491)
.++..++++++|+.-+++-+.-|.-.-..-++ .+++.+-.+.. ......++..++.+++.+|.++++-........+.
T Consensus 3 ~~~~~~Ls~~Yf~~F~~~G~~~Pf~~l~L~~~G~s~~~IGii~a-~~~~~~~v~~~~~~~l~d~~~~~~~~l~~~~~~~~ 81 (383)
T PRK11128 3 LSPTRWLALSYFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLG-AGLVFRFLGSLLIAPRVKDPSQLIPALRLLALLTL 81 (383)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 98789999999999999999999999999738989899999999-99999999988899998634434899999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 99999999842100146523455553101013445787655579999999999999999999999999864098998999
Q gi|254780323|r 105 FFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRF 184 (491)
Q Consensus 105 ~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRl 184 (491)
..... ..++. -+.|...+..+...++-+-++.+ .=+.+.+.- ++.+--
T Consensus 82 ~~~~~--~~~~~---------------------------~~f~~~~~~~~l~~~~~~~~~pl-~dsl~~~~~--~~~~~~ 129 (383)
T PRK11128 82 IFAVA--FWFGA---------------------------HSFWLMFVAIGLFNLFFSPLVPL-TDALANTWQ--KQIGLD 129 (383)
T ss_pred HHHHH--HHHHH---------------------------HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH--HHCCCC
T ss_conf 99999--99987---------------------------68999999999999998447637-999999996--554564
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 99999899999999889999996301232248999999999999999999999840245223320000112345788899
Q gi|254780323|r 185 YATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLE 264 (491)
Q Consensus 185 f~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (491)
||-+=..|++|-+++......+.+..+............. ...+.... .+++ .+.++.+++++++ .
T Consensus 130 YG~iRlwGSiGf~~~~l~~G~l~~~~g~~~i~~~~~~~~~----~~~l~~l~----~~~~--~~~~~~~~~~~~~----~ 195 (383)
T PRK11128 130 YGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVA----SMLLGQLL----RPTV--MPQGESRQQESAG----P 195 (383)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH----HHHHHHHH----CCCC--CCCCCCCCCCCCC----C
T ss_conf 1588899889999999999999987270179999999999----99999996----7877--8643332345565----2
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998309679999999999999999999999999998329989999999999999999999999997899997316789
Q gi|254780323|r 265 SLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTS 344 (491)
Q Consensus 265 ~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~ 344 (491)
+.+.++|+|......+.+.+.+......|.-...+.++..-++ ...|......-+.-+.+.++.+++++|+|.+..
T Consensus 196 ~~~~llk~~~~~~fll~~~l~~~sh~~~y~F~~i~~~~~G~s~----~~iG~lw~~~v~aEI~~f~~~~rl~~r~g~~~l 271 (383)
T PRK11128 196 AWLALLKEPTVWRFLLCVSLIQGSHAAYYSFSAIYWQAAGYSA----STIGYLWSLGVVAEVLIFAFSKRLFRRWSARDL 271 (383)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_conf 0999870818999999999999998999999999999859967----399999999999999999999999998298999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHEECCHHHHHHH
Q ss_conf 999999999999999999841012346667873002079999999999999998763446466-8777522697673657
Q gi|254780323|r 345 AIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDST-KEMAFIPLDDEFRTKG 423 (491)
Q Consensus 345 l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~-~E~l~~pl~~~~R~k~ 423 (491)
+.+.-....+ =...+... ++.... ...+ ...+..|+++-++ .+.+ ...+++.+.++
T Consensus 272 l~ia~~~~~l---Rw~l~a~~--------------~~~~~~----~~~Q-lLHg~tFg~~~~a~i~~i-~~~~~~~~~~~ 328 (383)
T PRK11128 272 LLLSAVCGVI---RWGLMGST--------------TALPWL----ILVQ-ILHCGTFAVCHLAAIRYI-AARPGSEVIRL 328 (383)
T ss_pred HHHHHHHHHH---HHHHHHHH--------------CCHHHH----HHHH-HHHHHHHHHHHHHHHHHH-HHCCCHHHHHH
T ss_conf 9999999999---99999986--------------039999----9999-999999999999999999-85694227899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7767888764667779999999999830
Q gi|254780323|r 424 KAVVDVIGGRMAKSGGAVIQSFIFMLFP 451 (491)
Q Consensus 424 K~~iD~~~~r~Gk~~gs~~~~~l~~~~~ 451 (491)
++.+-++..-+|-+.|+.+...+....+
T Consensus 329 Q~ly~~~~~Glg~~ig~~~~G~ly~~~G 356 (383)
T PRK11128 329 QALYSALAMGGSIAIMTVLSGFLYQHLG 356 (383)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999988999999999999999856
No 17
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.19 E-value=1.5e-06 Score=69.40 Aligned_cols=375 Identities=10% Similarity=0.047 Sum_probs=201.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 2327999999999999999999998778865124854--46799999999999999999999996338999999999999
Q gi|254780323|r 25 EAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGAE--IISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFF 102 (491)
Q Consensus 25 E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e--~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f 102 (491)
=.++++...+.-|+...+.+++-|+=-....+..|++ .+=.+..... ...++..+..++++||++|||+...-...+
T Consensus 15 ~t~~~~~i~~~~Fl~~l~~g~~~PvlP~y~~~~lg~s~~~iGli~~~f~-l~~~i~~p~~G~lsDr~GRk~vll~gl~~~ 93 (395)
T PRK05122 15 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAVVAGLVISLQY-FATLLSRPHAGRLADTLGPKKAVVFGLCGC 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 6999999999999999999869998999999747996989999999999-999999998999998348629899999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 99999999998421001465234555531010134457876555799999999999-99999999999999864098998
Q gi|254780323|r 103 VSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAEL-WGAVMINLMFWQFANRITKTEEA 181 (491)
Q Consensus 103 ~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~-~~~~vis~~FW~~~n~~f~~~qa 181 (491)
.+....+.+.-.+... . ..+.+..-..-+.-.+ ++.... .--+++.|...+++.
T Consensus 94 ~l~~~~~~~a~~~~~~-----~------------------~~~l~~L~~~R~l~Gi~~a~~~~--a~~a~~~~~~p~~rr 148 (395)
T PRK05122 94 FLSGLLYLLAGLLAAW-----P------------------VLSLLLLLAGRLLLGIGESLAGT--GSILWGIGRVGSEHT 148 (395)
T ss_pred HHHHHHHHHHHHHHHH-----H------------------HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCHHHH
T ss_conf 9999999999875200-----3------------------77999999999998989999999--999999861689889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999899999999889999996301232248999999999999999999999840245223320000112345788
Q gi|254780323|r 182 TRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLS 261 (491)
Q Consensus 182 KRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (491)
.|-.+..+.+.++|..+|+.+..++.+..+-..... ..+.+....+. ... ..++.+ .+++++.+
T Consensus 149 g~~mg~~g~~~~lg~~iGP~iG~~l~~~~g~~~~f~-----~~~~l~~~~~~--~~~---~~~~~~------~~~~~~~~ 212 (395)
T PRK05122 149 GRVISWNGIATYGALAIGAPLGVLLYHWGGLAALGL-----LIMLLALLGLL--LAR---PRPPVP------PVKGERLP 212 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH-----HHHHHHHHHHH--HHH---CCCCCC------CCCCCCCC
T ss_conf 999999999999999999999999999726999999-----99999999999--971---278998------76777887
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999998309679999999999999999999999999998329989999999999999999999999997899997316
Q gi|254780323|r 262 VLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRW 341 (491)
Q Consensus 262 ~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~ 341 (491)
+.+..+.+.. +-..+.+..+.+....+++-. +..+...++. +.+....++..++.+++.+++.+|+|.
T Consensus 213 ~~~~~~~~~~--~~~~~~l~~~~~~~i~~f~~l----y~~~~g~~~~------~~~~~~~~~~~~~~r~~~g~l~dr~g~ 280 (395)
T PRK05122 213 FRRVLGRVWP--YGMGLALASIGFGTIATFITL----YYAARGWDGA------ALALTLFGVAFVGARLLFGNLINRLGG 280 (395)
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH----HHHHCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8999998899--999999999999999999999----9988273136------999999999999999983278786064
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE-ECCHHHH
Q ss_conf 789999999999999999999841012346667873002079999999999999998763446466877752-2697673
Q gi|254780323|r 342 FTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFI-PLDDEFR 420 (491)
Q Consensus 342 ~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~-pl~~~~R 420 (491)
....... .++.+.++...... +-...++.++ +.-..-+++..|+-+.+-. ..|+++|
T Consensus 281 ~~~i~~~---~~l~~~~l~ll~~~---------------~~~~~ll~a~----~l~G~G~g~~~P~l~a~~~~~~p~~~r 338 (395)
T PRK05122 281 LRVAIVS---LAVEILGLLLLWLA---------------PSPWVALIGA----ALTGFGFSLVFPALGVEAVKRVPPQNR 338 (395)
T ss_pred HHHHHHH---HHHHHHHHHHHHHH---------------HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 4899999---99999999999987---------------2099999999----999999988889999999864987245
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 657776788876466777999999999983000023337999999999999999999997089
Q gi|254780323|r 421 TKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVNQLSKE 483 (491)
Q Consensus 421 ~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~~~~L~~~ 483 (491)
.++-+..-+ ...+|-+.|+.+...+...++...+ .....+.+++++...+.++|+
T Consensus 339 G~a~g~~~~-~~dlG~~iG~~l~G~la~~~G~~~~-------f~~~a~~~l~~~~l~~~~~rr 393 (395)
T PRK05122 339 GAALGAYSV-FFDLSLGITGPLAGLVASWFGYPSI-------FLFAALAAALGLALTLLLKRR 393 (395)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCHHH-------HHHHHHHHHHHHHHHHHHHCC
T ss_conf 799999999-9999999999999999997383689-------999999999999999998068
No 18
>PRK11462 putative transporter; Provisional
Probab=99.15 E-value=2.2e-06 Score=68.17 Aligned_cols=304 Identities=12% Similarity=0.066 Sum_probs=148.3
Q ss_pred HHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999986409-8998999999998999999998899999963012322--48999999999999999999
Q gi|254780323|r 158 LWGAVMINLMFWQFANRITK-TEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELM--IYYSMLTLILSSILLMAVYR 234 (491)
Q Consensus 158 ~~~~~vis~~FW~~~n~~f~-~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~ 234 (491)
.+..+.+ =+|++..+.++ .+|--|+.+.=..++++|.+++......+.+..+... ..+.......+.+....+.
T Consensus 122 ~yT~~~i--Py~aL~~elT~d~~ERt~l~~~R~~~~~~g~~~~~~~~~~lv~~~g~~~~~~g~~~~~~v~~vi~~i~~~- 198 (460)
T PRK11462 122 LYTVVNI--PYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLA- 198 (460)
T ss_pred HHHHHHH--HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 9886453--6875247864899999999999999999999999999999999966984378999999999999999999-
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 99984024522332000011234578889999998309679999999999999999999999999998329989999999
Q gi|254780323|r 235 WMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFM 314 (491)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~ 314 (491)
... ...+++ .++++++.+.++.++.+++||..+.+....++..+..++.........+-...+++..+.+.
T Consensus 199 ~~~--~~~ke~-------~~~~~~~~s~~~~l~~~~~N~~~~~l~~~~~~~~~~~~~~~~~~~yy~~y~lg~~~~~~~~~ 269 (460)
T PRK11462 199 FCF--FTTKER-------VEAPPTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFL 269 (460)
T ss_pred HHH--HCCCCC-------CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 999--522036-------66886642399999999738389999999999999999999998888863168789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 99999999999999999789999731678999999999999999999984101234666787300207999999999999
Q gi|254780323|r 315 GQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNV 394 (491)
Q Consensus 315 g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~ 394 (491)
+.+ .+..++...+..++.++.|-+........+..+.....+..+.-+........... ..............
T Consensus 270 ~~~----~i~~li~~~l~~~l~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~l~~am 342 (460)
T PRK11462 270 TTY----CVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVI---GVLHQLVTPIQWVM 342 (460)
T ss_pred HHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_conf 999----99999999999999999999999999999999999999996533299999999999---99999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHEECCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH--HHHHHH---------
Q ss_conf 99987634464668777522697673657-776788876466777999999999983000023--337999---------
Q gi|254780323|r 395 LSKATKYTMFDSTKEMAFIPLDDEFRTKG-KAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFS--SIVPYL--------- 462 (491)
Q Consensus 395 ~~k~~kYsl~~p~~E~l~~pl~~~~R~k~-K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~--~~~~~~--------- 462 (491)
...+.+|.-.+.. .|..+ -...-++..|+|-++|+.+...++...+..... +..+.+
T Consensus 343 ~aDvvDy~e~ktG-----------~R~eG~~~s~~~f~~K~~~al~~~i~g~~L~~~Gy~~~~~~Q~~~~~~~i~~l~~~ 411 (460)
T PRK11462 343 MSDTVDYGEWCNG-----------KRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDAAEKAQNSATISIIIALFTI 411 (460)
T ss_pred HHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 6658777788719-----------86189999999999999999999999999998588888888998999999999999
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf -99999999999999999708999985349
Q gi|254780323|r 463 -AVFFLCLMFIWIYVVNQLSKEYTQLISKE 491 (491)
Q Consensus 463 -~~~~i~i~~~Wi~~~~~L~~~y~~~i~~~ 491 (491)
..+..+++.++...-++|.++-.+.++||
T Consensus 412 ~P~i~~ll~~ii~~~~Y~L~~~~~~eI~~e 441 (460)
T PRK11462 412 VPAICYLLSAIIAKRYYSLTTHNLKTVMEQ 441 (460)
T ss_pred HHHHHHHHHHHHHHHEECCCHHHHHHHHHH
T ss_conf 999999999999995235989999999999
No 19
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.13 E-value=2.8e-06 Score=67.35 Aligned_cols=355 Identities=11% Similarity=0.013 Sum_probs=167.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 11232799999999999999999-------99987788651248544679999999999999999999999633899999
Q gi|254780323|r 23 MSEAKKFIPMTLMMFLVLFNFST-------LRPIKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLF 95 (491)
Q Consensus 23 ~~E~~~~~~~~~~~F~i~~~y~~-------lr~~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~ 95 (491)
|..+|..+.+.++++...+.|+= +-.+++++-++ ++..-++-. ..+....+.....+++.||++||+++
T Consensus 8 ~~~~~~~~v~~l~~~~~~~d~~D~~~~g~~~p~i~~e~~ls---~~~~G~l~s-~~~~g~~ig~~~~G~LaDr~Grr~vl 83 (406)
T PRK11551 8 SSSSRLALTIGLCFAVALLEGLDLQSAGVAAPRMAREFGLD---VAQMGWAFS-AGILGLLPGALLGGRLADRIGRKRVL 83 (406)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 87230999999999999999999999999999999985939---989999999-99999999999999999997629999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999842100146523455553101013445787655579999999999999999999999999864
Q gi|254780323|r 96 YVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRI 175 (491)
Q Consensus 96 ~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~ 175 (491)
-.....+.+.-.+.++.- +.|....+-....+-....... -.++.+|.
T Consensus 84 ~~~~~~~~i~~~l~a~a~-------------------------------s~~~l~~~R~l~Gig~g~~~p~-~~~~i~e~ 131 (406)
T PRK11551 84 IVSVALFGLFSLATAQAW-------------------------------DFPSLLVARLLTGLGLGGALPN-LIALTSEA 131 (406)
T ss_pred HHHHHHHHHHHHHHHCCC-------------------------------CHHHHHHHHHHHHHCCCCHHHH-HHHHHHHH
T ss_conf 999999999999997158-------------------------------8999999999997234100117-79887874
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 09899899999999899999999889999996301232248999999999999999999999840245223320000112
Q gi|254780323|r 176 TKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVK 255 (491)
Q Consensus 176 f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (491)
+.+++..|..+....|.++|.++++.+...+....+ +...-.......+....+ .....+++++..+.+ ++
T Consensus 132 ~p~~~Rg~a~~~~~~g~~~G~~~~~~l~~~l~~~~g---WR~~f~i~gi~~~i~~~~---~~~~l~es~~~~~~~---~~ 202 (406)
T PRK11551 132 AGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAE---WRHIFYVGGVGPLLLVPL---LMRWLPESRAFLQAA---GV 202 (406)
T ss_pred CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHH---HHHHCCCCCHHHHHC---CC
T ss_conf 789997667603234443068999999999960125---999999999999999999---999878980046646---53
Q ss_pred CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3457888999999830967999999999999999999999999-999832998999999999999999999999999789
Q gi|254780323|r 256 KKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKE-KVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSN 334 (491)
Q Consensus 256 ~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~-~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ 334 (491)
++.+.+..+.+..-.+.+....+....++..... ..-..|.. ...+..-++.+ + +......++...+-.++.++
T Consensus 203 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~-~~~~~wlP~~l~~~g~s~~~-a---~~~~~~~~~~~~~g~~~~g~ 277 (406)
T PRK11551 203 GAAQAGVLRALFGEGRATATLLLWISYFFTLIVL-YFLLNWLPSLLIAQGLSRSQ-A---GLVQIAFNIGGALGSLLIGA 277 (406)
T ss_pred CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCHHH-H---HHHHHHHHHHHHHHHHHHHH
T ss_conf 3221235889861227999999999999999999-99999999999985998889-9---99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
Q ss_conf 99973167899999999999999999998410123466678730020799999999999999987634464668777522
Q gi|254780323|r 335 ILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIP 414 (491)
Q Consensus 335 ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~p 414 (491)
+.+|+|-+......-....+.. ..... .+... .+.... .....+.-...-.++--.-|.
T Consensus 278 l~dr~g~~~~~~~~~~~~~~~l---~~~~~-~~~~~----------~~~~~~---~~~g~~~~~~~~~~~~~~~e~---- 336 (406)
T PRK11551 278 LMDRLRPSRVVLGMYAGILASL---AALAA-APGFA----------GMALAG---FAAGLFVVGGQSVLYALAPLF---- 336 (406)
T ss_pred HHHHHCCHHHHHHHHHHHHHHH---HHHHH-HHHHH----------HHHHHH---HHHHHHHHHHHHHHHHHHHHH----
T ss_conf 9988363999999999999999---99999-87799----------999999---999999999999999999987----
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 69767365777678887646677799999999998
Q gi|254780323|r 415 LDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFML 449 (491)
Q Consensus 415 l~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~ 449 (491)
.|++.|..+-.+...+ .|+|-..|-.+...+...
T Consensus 337 ~p~~~rgt~~G~~~~~-g~lG~~igP~~~G~ll~~ 370 (406)
T PRK11551 337 YPTQMRGTGVGAAVAV-GRLGSMAGPLAAGQLLAL 370 (406)
T ss_pred CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHC
T ss_conf 8598999999999999-999999999999999981
No 20
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.13 E-value=2.8e-06 Score=67.30 Aligned_cols=314 Identities=13% Similarity=0.100 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--HHHHHHHHH
Q ss_conf 7999999999999999999999999986409-8998999999998999999998899999963012322--489999999
Q gi|254780323|r 147 WSFALFYVFAELWGAVMINLMFWQFANRITK-TEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELM--IYYSMLTLI 223 (491)
Q Consensus 147 w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~-~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~--~~~~~~~~~ 223 (491)
|.+..+++|.=.++.+.+. +|++..++++ ++|--|+.+.=..++++|.++.......+....+..+ .-+.....+
T Consensus 114 ya~vtY~l~~l~YT~vniP--y~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~ 191 (467)
T COG2211 114 YALVTYMLLGLGYTLVNIP--YGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALV 191 (467)
T ss_pred HHHHHHHHHHHHHHHEECC--HHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 9999999999999831172--53146443399888788998999999899999999999999880898510409999999
Q ss_pred HHHHHHH-HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999-999999984024522332000011234578889999998309679999999999999999999999999998
Q gi|254780323|r 224 LSSILLM-AVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQ 302 (491)
Q Consensus 224 ~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~ 302 (491)
.+.+.++ .+..+.+.++ +.. +..+.++..+..+.+.+..+++||-++.++++.++.....++.--..-..+.
T Consensus 192 ~~vi~~i~~l~~~~~v~E----R~~--~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~- 264 (467)
T COG2211 192 LGVIGVILLLFCFFNVKE----RVV--ETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVT- 264 (467)
T ss_pred HHHHHHHHHHHHHHHHHC----CCC--CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEE-
T ss_conf 999999999999987505----667--6666765334438889999972646999999999999999998565221588-
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 32998999999999999999999999999789999731678999999999999999999984101234666787300207
Q gi|254780323|r 303 LYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPL 382 (491)
Q Consensus 303 ~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l 382 (491)
..-+..|.-..+..+ ......++...+.+++.+++|-+....+.-++..++..+++.... +. .
T Consensus 265 y~lg~~~l~~~~~~~--~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~--~~-------------~ 327 (467)
T COG2211 265 YVLGDPELFAYLLLL--ASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPA--GS-------------V 327 (467)
T ss_pred EECCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC--CC-------------H
T ss_conf 875871889999999--999999999986899999956299999999999999989985167--61-------------6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 9999999999999998763446466877752269767365777678-------887646677799999999998300002
Q gi|254780323|r 383 ALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVD-------VIGGRMAKSGGAVIQSFIFMLFPMATF 455 (491)
Q Consensus 383 ~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD-------~~~~r~Gk~~gs~~~~~l~~~~~~~~~ 455 (491)
.+.+... .-...-++..++--=.+.--+.+..+.|...-.| +++.|+|-++|+.+....+..++...-
T Consensus 328 ~l~~~~~-----~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy~~~ 402 (467)
T COG2211 328 VLIVVAL-----IIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGYVPN 402 (467)
T ss_pred HHHHHHH-----HHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 8999999-----99998663224432887224144888872787024678999999999999999999999997287878
Q ss_pred H--HHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 3--33799999999---------999999999999708999985349
Q gi|254780323|r 456 S--SIVPYLAVFFL---------CLMFIWIYVVNQLSKEYTQLISKE 491 (491)
Q Consensus 456 ~--~~~~~~~~~~i---------~i~~~Wi~~~~~L~~~y~~~i~~~ 491 (491)
. ++...+..+.. .+...++..-++|+++-++.+.||
T Consensus 403 ~~~Q~~~al~gI~~~~~~~Pa~l~l~~~i~~~~y~L~~~~~~~I~~e 449 (467)
T COG2211 403 VSAQSASALFGIRFLFIILPALLLLLAAIIIFFYKLNEKMHKEIIEE 449 (467)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 54477889999999999999999999999997660878999999999
No 21
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.11 E-value=3.3e-06 Score=66.73 Aligned_cols=384 Identities=10% Similarity=0.033 Sum_probs=182.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 8112327999999999999999999998778865124-854467999999999999-99999999996338999999999
Q gi|254780323|r 22 KMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHM-GAEIISFVKLWCVFPSAI-LFTILYMKLSNILETEKLFYVVV 99 (491)
Q Consensus 22 ~~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~-g~e~lp~l~~~~~l~~s~-~~~~~y~~l~~~~~~~~l~~~~~ 99 (491)
|++..+-++++.+...+--.+-.+.-|.=.++.-+-. +++.....- ....... +...+|+-++||++||++...-.
T Consensus 3 ~~~~~~~i~~l~~l~~~~~la~d~ylPalP~ia~~~~~s~~~vq~tl--s~f~~g~a~~ql~~GpLSDr~GRk~vll~gl 80 (394)
T PRK11652 3 RQRNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGALQAVM--AAYLLTYGLSQLFYGPLSDRVGRRPVILVGM 80 (394)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 87554799999999999999998898609999999698998999999--9999999999999999998828869999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 99999999999998421001465234555531010134457876555799999999999999999999999998640989
Q gi|254780323|r 100 SFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTE 179 (491)
Q Consensus 100 ~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~ 179 (491)
..|.+.-+..++.- +-+ .. .....+++. -+... .+.-++...|.++.+
T Consensus 81 ~lf~i~s~~~a~a~--si~-------~l----l~~R~lQG~------------------Ga~~~-~v~~~AiirD~~~g~ 128 (394)
T PRK11652 81 SIFILGTLVALTAH--SLT-------VL----IAASAIQGM------------------GTGVG-GVMARTLPRDLYEGT 128 (394)
T ss_pred HHHHHHHHHHHHHH--HHH-------HH----HHHHHHHCC------------------CCCCC-CHHHHHHHHHCCCHH
T ss_conf 99999999999876--799-------99----999998276------------------65100-009999988636899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98999999998999999998899999963012322489999999999999999999998402452233200001123457
Q gi|254780323|r 180 EATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLK 259 (491)
Q Consensus 180 qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (491)
|++|..+.++.+..++.++++.+...+.+..+ +...-......+..+..... ...+++ . + +++.+
T Consensus 129 ~~ak~~s~~~~~~~~~p~laP~iGg~l~~~~g---Wr~~F~~l~~~~~~~~l~~~---~~lpET---~-~-----~~~~~ 193 (394)
T PRK11652 129 QLRHANSLLNMGILFSPLLAPLIGGLLTTLFG---WRACYLFLLVFGAGVTFSMA---RWMPET---L-P-----KDARR 193 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHH---HHCCCC---C-C-----CCCCC
T ss_conf 99999999889999851026169999980055---99999999999999999999---968888---9-9-----64563
Q ss_pred CCHHHHHHHHHCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88899999983096799999999-999999999999999999983-2998999999999999999999999999789999
Q gi|254780323|r 260 LSVLESLRMALNSKYLGYLVLLV-ICYGTAINLVEGPWKEKVRQL-YPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILK 337 (491)
Q Consensus 260 ~~~~~~~k~i~~s~yL~~l~~~v-~~~~~~~tl~e~~~k~~~~~~-~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~ 337 (491)
.+..++.+.+++||....-.... ..+.....+.... -....+. .-++.+ +|.+........++-..+.+|+.+
T Consensus 194 ~~~~~~y~~ll~~~~f~~~~l~~~~~~~~~~~f~~~~-p~v~~~~~gls~~~----~g~~f~~~~~~~~~g~~l~~rl~~ 268 (394)
T PRK11652 194 TRVLASYKTLLGNRRFNCYLLMLIATLAGIAVFEACA-GVLMGAVLGLSSMT----VSILFILPIPGYFFGAWFAGRPNK 268 (394)
T ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 0189999999867579999999999999999999964-99999982798899----999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCH
Q ss_conf 73167899999999999999999998410123466678730020799999999999999987634464668777522697
Q gi|254780323|r 338 SFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDD 417 (491)
Q Consensus 338 r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~ 417 (491)
|++-..... -...+..+........++... .+ .+........ .-.++.-|.-...-+.--+
T Consensus 269 r~~~~~~~g--~~~~~~~~~~~l~~~~~~~~~------------~~-~l~~~~~l~~----~g~G~~~p~~~a~al~~~~ 329 (394)
T PRK11652 269 RFSTLMWQS--VICCLLGGLFMWIPGWFGVMN------------VW-TLLVPAALFF----FGAGMLFPLATSGAMEPFP 329 (394)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH------------HH-HHHHHHHHHH----HHHHHHHHHHHHHHHHHCC
T ss_conf 999999999--999999999999999887745------------99-9999999999----9999888999999976484
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 673657776788876466777999999999983000023337999999999999999999997089
Q gi|254780323|r 418 EFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVNQLSKE 483 (491)
Q Consensus 418 ~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~~~~L~~~ 483 (491)
+.+..+-+.. |...-.+-+.++.+ ......++.....-...+..+...+.|+....|++++
T Consensus 330 ~~aGtAsal~-g~~q~~~~~~~~~l----~~~l~~~~~~~l~~~~~~~~~~~l~~~l~l~~r~~~~ 390 (394)
T PRK11652 330 FLAGTAGALL-GGLQNIGSGLAALL----SAMLPQTGQGSLGLLMTLMGLLILLCWLPLASRMSHQ 390 (394)
T ss_pred CCCHHHHHHH-HHHHHHHHHHHHHH----HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 3030999999-99999999999999----9971369768999999999999999999998634456
No 22
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.07 E-value=4.8e-06 Score=65.46 Aligned_cols=344 Identities=11% Similarity=0.050 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 27999999999999999999998778865124-85446799999999999999999999996338999999999999999
Q gi|254780323|r 27 KKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHM-GAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSF 105 (491)
Q Consensus 27 ~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~-g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~ 105 (491)
|.++.+++.-|.+...-++.-++=..+.-+-. ..+..-++-....+ ...+..++.+.+.+|++||++.-.....|.+.
T Consensus 3 ~~l~~Lal~~F~~gt~Ef~~~GlLp~ia~~l~vs~~~aG~lvt~yal-~~ai~~p~~~~l~~r~~Rk~~ll~~l~~f~~~ 81 (389)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYAL-GVVVGAPIIALFSSRYSLKHILLFLVALCVIG 81 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 89999999999998888979943598997859998999999999999-99999999999982368099999999999999
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 99999998421001465234555531010134457876555799999999999999999999999998640989989999
Q gi|254780323|r 106 FAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFY 185 (491)
Q Consensus 106 ~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf 185 (491)
-.+.++- | +.|..-..=+...+-.....++ --+.+.|..++++..|-.
T Consensus 82 ~~l~a~a---------~----------------------~~~~ll~~R~l~G~~~g~~~~~-~~~~~~~~~p~~~~g~a~ 129 (389)
T PRK10091 82 NAMFTLS---------S----------------------SYLMLAIGRLVSGFPHGAFFGV-GAIVLSKIIDPGKVTAAV 129 (389)
T ss_pred HHHHHHC---------C----------------------CHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHH
T ss_conf 9999986---------8----------------------8999999999999665799999-999999968877899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 99998999999998899999963012322489999999999999999999998402452233200001123457888999
Q gi|254780323|r 186 ATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLES 265 (491)
Q Consensus 186 ~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (491)
+.+..|-++|.++|..+..++.+..+ +...-......+..+.... ....++.+ ++++.+.++.
T Consensus 130 a~v~~g~s~a~v~G~p~g~~l~~~~g---WR~~F~~~~~l~~~~~~~~---~~~lP~~~-----------~~~~~~~~~~ 192 (389)
T PRK10091 130 AGMVSGMTVANLFGIPLGTYLSQEFS---WRYTFLLIAVFNIAVLASI---WFWVPDIR-----------DEADGGLREQ 192 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHH---HHHCCCCC-----------CCCCCCHHHH
T ss_conf 99999999999999999999987448---8999999999999999999---99789998-----------8788985889
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99983096799999999999999999999999-9999832-998999999999999999999999999789999731678
Q gi|254780323|r 266 LRMALNSKYLGYLVLLVICYGTAINLVEGPWK-EKVRQLY-PTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFT 343 (491)
Q Consensus 266 ~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k-~~~~~~~-~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~ 343 (491)
.+.+.+.+....+....+.. ...+.-|.|. ..+.+.. -++++... .....|+..++-.++++|+.+|+|.+.
T Consensus 193 ~~~l~~~~~~~~~~~~~l~~--~~~f~~~tyi~p~L~~~~g~s~~~i~~----~l~~~Gig~i~G~~l~Grl~Dr~g~~~ 266 (389)
T PRK10091 193 FHFLRSPAPWLIFAATMFGN--AGVFAWFSYIKPYMMFISGFSETSMTF----IMMLVGLGMVLGNLLSGRLSGRYSPLR 266 (389)
T ss_pred HHHHCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCCCCHHHHHH----HHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 98836819999999999999--999999999999999842999779999----999999999999999999976227415
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHH
Q ss_conf 99999999999999999998410123466678730020799999999999999987634464668777522697673657
Q gi|254780323|r 344 SAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRTKG 423 (491)
Q Consensus 344 ~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k~ 423 (491)
...+...+..+.-...... .... .. . .+....--..-+++ .|.-|..-+...++.+..+
T Consensus 267 ~~~~~~~~~~~~ll~l~~~---~~~~-~~-------------~---~v~~~l~~~~~~~~-~~~~q~~~~~~a~~~~~~a 325 (389)
T PRK10091 267 IAAVTDFIIVLALLMLFFF---GGMK-TT-------------S---LIFAFICCAGLFAL-SAPLQILLLQNAKGGELLG 325 (389)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHH-HH-------------H---HHHHHHHHHHHHHH-HHHHHHHHHHHCCCCHHHH
T ss_conf 9999999999999999998---8769-99-------------9---99999999999997-7999999998788976689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7767888764667779999999999
Q gi|254780323|r 424 KAVVDVIGGRMAKSGGAVIQSFIFM 448 (491)
Q Consensus 424 K~~iD~~~~r~Gk~~gs~~~~~l~~ 448 (491)
-+.. ......|-+.|+++......
T Consensus 326 ~al~-~sa~nlGialGs~~GG~~l~ 349 (389)
T PRK10091 326 AAGG-QIAFNLGSAIGAYCGGLMLT 349 (389)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHH
T ss_conf 9999-99999999999999999997
No 23
>PRK09952 shikimate transporter; Provisional
Probab=99.04 E-value=6.2e-06 Score=64.58 Aligned_cols=348 Identities=14% Similarity=0.145 Sum_probs=170.8
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
Q ss_conf 788651248544679999999999999999----9999996338999999999999999999999984210014652345
Q gi|254780323|r 51 DSLVVPHMGAEIISFVKLWCVFPSAILFTI----LYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPES 126 (491)
Q Consensus 51 d~l~~~~~g~e~lp~l~~~~~l~~s~~~~~----~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~ 126 (491)
...+-...++ ...-+..+.++.++.+.-| +++++.||++|++.+..++..+.+.=++.++ .|..+ .
T Consensus 50 ~~~FFp~~~~-~~~ll~~~~~fa~gfl~RPlGg~ifG~~gDr~GRk~~L~~si~~m~~~T~lig~--lPty~-------~ 119 (438)
T PRK09952 50 NREFFPQVSP-AMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGL--LPSFS-------T 119 (438)
T ss_pred HHHCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH--CCCHH-------H
T ss_conf 8724999990-799999999999999987589999999997303399999999999999999997--47689-------8
Q ss_pred HHHH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5553----101013445787655579999999999999999999999999864098998999999998999999998899
Q gi|254780323|r 127 IRAL----ASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGI 202 (491)
Q Consensus 127 ~~~~----~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~ 202 (491)
+..+ -.....+ ..+-+-.|.=+ + ..++.|....++-.++-+.+..|.++|.+++...
T Consensus 120 IGi~ApilLv~~R~l------------QGl~~GGE~~~----a---~~~~~E~~p~~~Rg~~~s~~~~~~~~G~llas~~ 180 (438)
T PRK09952 120 IGWWAPVLLVTLRAI------------QGFAVGGEWGG----A---ALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGL 180 (438)
T ss_pred HHHHHHHHHHHHHHH------------HHHHHHHHHHH----H---HHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHH
T ss_conf 888999999999999------------78887612889----9---9999996887773244049999889999999999
Q ss_pred HHHHHHHCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHH
Q ss_conf 999963012322489999-9999999999999999984024522332000011234578889999998309679999999
Q gi|254780323|r 203 VKTFSKLTNELMIYYSML-TLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLL 281 (491)
Q Consensus 203 ~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~ 281 (491)
...+....++..+.-..+ .....+.....+..+++++..+.|+..+.++++++++.+....|.++.-.++ .+..++..
T Consensus 181 ~~~l~~~l~~~~~~~wGWRipFlig~l~~li~l~iR~~l~Esp~f~~~~~~~~~~~~~~p~~e~~~~~~~~-~l~~~~l~ 259 (438)
T PRK09952 181 VSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGA-FLKIIALR 259 (438)
T ss_pred HHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH-HHHHHHHH
T ss_conf 99999836888885314299999999999999999982788878999876233443346699999986599-99999999
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999-999983299899999999999999999999999978999973167899999999999999999
Q gi|254780323|r 282 VICYGTAINLVEGPWK-EKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFF 360 (491)
Q Consensus 282 v~~~~~~~tl~e~~~k-~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff 360 (491)
.. .......-..|. .+......-+. ...-+....++.+.++...+.+++-+|+|-+....+.-+...+....++
T Consensus 260 -~~-~~~~~y~~~~~~~~y~~~~l~~~~---~~~~~~~~i~~~i~~~~~~~~G~LsDriGRr~~~~~~~l~~~l~~~p~~ 334 (438)
T PRK09952 260 -LC-ELLTMYIVTAFALNYSTQNLGLPR---ELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFF 334 (438)
T ss_pred -HH-HHHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf -99-999999999999999998728889---9999999999999999999999999983634999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99841012346667873002079999999999999998763446466877752269767365777678887646677799
Q gi|254780323|r 361 VFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGA 440 (491)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs 440 (491)
....- .+.......+.....+.-..-++...+- +----|.+.|+.+-++-=.++.-++-+..-
T Consensus 335 ~~l~~--------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~---l~ElFPt~vR~TG~g~~Ynig~~i~Gg~aP 397 (438)
T PRK09952 335 MALEA--------------QSIFWIVFFSIMLANIAHDMVVCVQQPM---FTEMFGASYRYSGAGVGYQVASVVGGGFTP 397 (438)
T ss_pred HHHHC--------------CCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99843--------------8689999999999999999998899999---998688605576899999999999999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999983
Q gi|254780323|r 441 VIQSFIFMLF 450 (491)
Q Consensus 441 ~~~~~l~~~~ 450 (491)
.+...+....
T Consensus 398 ~i~~~L~~~~ 407 (438)
T PRK09952 398 FIAAALVTYF 407 (438)
T ss_pred HHHHHHHHHH
T ss_conf 9999999976
No 24
>PRK12382 hypothetical protein; Provisional
Probab=99.01 E-value=8.1e-06 Score=63.66 Aligned_cols=378 Identities=10% Similarity=0.012 Sum_probs=198.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 8112327999999999999999999998778865124854--46799999999999999999999996338999999999
Q gi|254780323|r 22 KMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGAE--IISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVV 99 (491)
Q Consensus 22 ~~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e--~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~ 99 (491)
|....+.++...+-.|+...++.++-|+=--.+.+..|+. ..=.+.. .-....++..+..+++.||++||++...-.
T Consensus 10 ~~~~~~~l~~l~~~~F~~~~g~~~~~PvlP~y~~~~LGas~~~vGli~~-~f~la~~~~~p~~G~l~Dr~GRk~vll~gl 88 (393)
T PRK12382 10 RSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGIAVG-IQFLATVLTRGYAGRLADQYGAKRSALQGM 88 (393)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 4454417999999999999999879999999999736986889999999-999999999998889998049708999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 99999999999998421001465234555531010134457876555799999999999999999999999998640989
Q gi|254780323|r 100 SFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTE 179 (491)
Q Consensus 100 ~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~ 179 (491)
..+.....++.+.-... .....+.|..-..-+.-.+-...+.+ .--+++.|...++
T Consensus 89 ~~~a~~~lly~~a~~~~-----------------------~~~~~~~~~L~~~R~l~G~~~a~~~~-~~~a~~~d~~p~~ 144 (393)
T PRK12382 89 LACGLAGLAYLLAAILP-----------------------VSAPFKFALLVVGRLILGFGESQLLT-GALTWGLGLVGPQ 144 (393)
T ss_pred HHHHHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHH
T ss_conf 99999999999998877-----------------------76789999999999998988999999-8999999864733
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98999999998999999998899999963012322489999999999999999999998402452233200001123457
Q gi|254780323|r 180 EATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLK 259 (491)
Q Consensus 180 qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (491)
+..|-.|.++.+...|..+|+.+..++.+..+-. ..........+.... ..... + +.+.+++++
T Consensus 145 ~rG~~mg~~g~~~~~g~aiGp~lG~~l~~~~g~~-----~~~~~~~~l~l~~~~--~~~~~-----~----~~~~~~~~~ 208 (393)
T PRK12382 145 HSGKVMSWNGMAMYGALAAGAPLGLLIHSHFGFA-----ALALTTMVLPLLAWA--FNGTV-----R----KVPALAGER 208 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH--HHCCC-----C----CCCCCCCCC
T ss_conf 2328989988999999999998999999986699-----999999999999999--83457-----7----887655556
Q ss_pred CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88899999983096799999999999999999999999999983299899999999999999999999999978999973
Q gi|254780323|r 260 LSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSF 339 (491)
Q Consensus 260 ~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~ 339 (491)
.+.++-.+.+. .|.+ .+....+.+....+++-. +..+. +. +.-|.+....++..++.+.+.+++.+|+
T Consensus 209 ~~~~~~~~~~~-~~~l-~~~l~~~~~~~i~~f~~l----y~~~~--~~----~~~g~~~~~~~~~~~l~r~~~G~l~Dr~ 276 (393)
T PRK12382 209 PSLWSVVGLIW-KPGL-GLALQGVGFAVIGTFVSL----YFASK--GW----AMAGFTLTAFGGAFVLMRVLFGWMPDRF 276 (393)
T ss_pred CCHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHH----HHHHC--CH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 65899999999-9899-999999999999999999----99873--60----6899999999999999999982898870
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHEECCHH
Q ss_conf 16789999999999999999999841012346667873002079999999999999998763446466877-75226976
Q gi|254780323|r 340 RWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEM-AFIPLDDE 418 (491)
Q Consensus 340 G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~-l~~pl~~~ 418 (491)
|-...+... +++.+.++....... -.+....++ +.-..-++...|+-+. +-...|++
T Consensus 277 G~~~v~~~g---l~l~a~gl~~l~~~~---------------~~~~ll~~~----~l~G~G~g~~~P~l~al~~~~~~~~ 334 (393)
T PRK12382 277 GGVKVAIVS---LLVETVGLLLLWLAP---------------TAWVALAGA----ALTGAGCSLIFPALGVEVVKRVPSQ 334 (393)
T ss_pred CCHHHHHHH---HHHHHHHHHHHHHHC---------------CHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 853889999---999999999999862---------------099999999----9999999887888999999758933
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7365777678887646677799999999998300002333799999999999999999999708
Q gi|254780323|r 419 FRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVNQLSK 482 (491)
Q Consensus 419 ~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~~~~L~~ 482 (491)
.|.++-+..... ..+|-..|+.+...+...++.... .....+++++.+.......|
T Consensus 335 ~rG~a~g~~~~~-~dlG~~~Gp~~~G~va~~~G~~~~-------F~~~av~~l~~l~v~~~~~r 390 (393)
T PRK12382 335 VRGTALGGYAAF-QDIAYGVSGPLAGMLATSFGYPSV-------FLAGAISAVLGIGVTILSFR 390 (393)
T ss_pred CCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCCHHH-------HHHHHHHHHHHHHHHHHHHC
T ss_conf 103799999999-999999999999999997493899-------99999999999999999963
No 25
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.01 E-value=8.1e-06 Score=63.66 Aligned_cols=253 Identities=11% Similarity=0.067 Sum_probs=134.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHH
Q ss_conf 85446799999999999999999999996338999999999999999999999984210014652345555310101344
Q gi|254780323|r 59 GAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLK 138 (491)
Q Consensus 59 g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~ 138 (491)
+++...+.-....+ ...+..++++.+.||++||+++..-...|.+.-++.++. ++-+
T Consensus 24 s~~~~~~~~s~~~l-~~a~~~l~~G~lsD~~GRr~~~~~~~~~~~i~~~~~~~a--~~~~-------------------- 80 (377)
T PRK11102 24 SAGSVQMTLSAYIL-GFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA--QTID-------------------- 80 (377)
T ss_pred CHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH--CCHH--------------------
T ss_conf 99899999999999-999999999999998188899999999999999999985--6799--------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 57876555799999999999999999999999998640989989999999989999999988999999630123224899
Q gi|254780323|r 139 WFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYS 218 (491)
Q Consensus 139 ~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~ 218 (491)
..-..=..-.+-+..... .-.+..+|.++.+|..|..+.++.+.++|.++|+.+...+.++.+ +...
T Consensus 81 ---------~l~~~R~lqG~~~~~~~~-~~~a~i~d~~~~~~~~~~~~~~~~~~~~~~~~~p~iGg~l~~~~g---Wr~~ 147 (377)
T PRK11102 81 ---------QLIVMRFLQGLAAAAASV-VINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGYLLVWFS---WHSI 147 (377)
T ss_pred ---------HHHHHHHHHHHCCCCCCH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---HHHH
T ss_conf ---------999999998653001305-889999970799999998799999999704888887799981356---6899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH-HHHHHHHHHHHHH
Q ss_conf 999999999999999999984024522332000011234578889999998309679999999999-9999999999999
Q gi|254780323|r 219 MLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVIC-YGTAINLVEGPWK 297 (491)
Q Consensus 219 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~-~~~~~tl~e~~~k 297 (491)
-......++.+..+.. ...++. . +++++++. ...+...+++.++++|..........+ +....++....=
T Consensus 148 F~~~~~~~~l~~~l~~---~~lpet---~-~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~f~~~~p- 218 (377)
T PRK11102 148 FWVLALAAILASALVF---FLIPET---L-PPENRQPF-HLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGP- 218 (377)
T ss_pred HHHHHHHHHHHHHHHH---HHCCCC---C-CCCCCCCC-CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 9999999999999999---975445---7-84467887-7999999999999586899999999999999999998347-
Q ss_pred HHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999983-299899999999999999999999999978999973167899999999999999999
Q gi|254780323|r 298 EKVRQL-YPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFF 360 (491)
Q Consensus 298 ~~~~~~-~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff 360 (491)
....+. .-++.+ +|.+.....+..++...+.+|+.+|+|-+.....--.+.++.+..+.
T Consensus 219 ~~~~~~~gls~~~----~gl~~~~~~~~~~~gs~l~grl~~r~g~~~~~~~gl~i~~~~~~~l~ 278 (377)
T PRK11102 219 FVYIEIYGVSPQN----FGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLV 278 (377)
T ss_pred HHHHHHCCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999982999899----99999999999999999999999995889999999999999999999
No 26
>PRK09669 putative symporter YagG; Provisional
Probab=98.99 E-value=9.2e-06 Score=63.23 Aligned_cols=298 Identities=14% Similarity=0.115 Sum_probs=148.2
Q ss_pred HHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999986409-8998999999998999999998899999963012322--48999999999999999999
Q gi|254780323|r 158 LWGAVMINLMFWQFANRITK-TEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELM--IYYSMLTLILSSILLMAVYR 234 (491)
Q Consensus 158 ~~~~~vis~~FW~~~n~~f~-~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~l~~ 234 (491)
.+..+.+. ++++..+.++ .+|--|+.+.=..++++|.++.+.....+....++.+ ............+.+. +..
T Consensus 120 ~~T~~~iP--y~aL~~elt~d~~eRt~l~~~r~~~~~~g~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~-~~~ 196 (442)
T PRK09669 120 VYTAINVP--YCAMPGVITNDPKERHSLQSWRFALSTAGGLIVSGIALPLVDWIGKGDEQKGYFGAMCVMGLLGVV-LFF 196 (442)
T ss_pred HHHHEEHH--HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH-HHH
T ss_conf 98870013--354021106888899999999999999999999999999998717862434999999999999999-999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 99984024522332000011234578889999998309679999999999999999999999999998329989999999
Q gi|254780323|r 235 WMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFM 314 (491)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~ 314 (491)
.. ....+++ ...+++++.+.++.+|.+++||..+.+....++......+.........+....+++. .+.+
T Consensus 197 ~~--~~~~~e~------~~~~~~~~~~~~~~~~~~~~N~~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~l~~~~~-~~~~ 267 (442)
T PRK09669 197 VC--FFTTKER------YTFEVQPQSSVLKDLKLLLANSQWRILFAFNVVLLTAVVVRGGATLYYVKYVMGRPDL-ATLF 267 (442)
T ss_pred HH--HCCCCCC------CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH-HHHH
T ss_conf 99--6044356------6876667744999999998561999999999999999999976899999999077779-9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 99999999999999999789999731678999999999999999999984101234666787300207999999999999
Q gi|254780323|r 315 GQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNV 394 (491)
Q Consensus 315 g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~ 394 (491)
..... +.+++...+.+++.+|+|-+.+..+.-+...+.....+.. .+... ........+ ..
T Consensus 268 ~~~~~---~~~i~~~~~~~~l~~k~gk~~~~~~~~~~~~~~~~~~~~~---~~~~~------------~~~~~~~~l-~g 328 (442)
T PRK09669 268 LVYGM---IANMFGALLSSRLLGRFDRVKAFKWIIIAYSVLSALIFFI---PAENI------------ALIFALNIL-FL 328 (442)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCHH------------HHHHHHHHH-HH
T ss_conf 99999---9999999999999999658999999999999999999995---75239------------999999999-99
Q ss_pred HHHHHHHHHHHHHHH-HHHEECCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH--HHHHHH--
Q ss_conf 999876344646687-775226976736577-------76788876466777999999999983000023--337999--
Q gi|254780323|r 395 LSKATKYTMFDSTKE-MAFIPLDDEFRTKGK-------AVVDVIGGRMAKSGGAVIQSFIFMLFPMATFS--SIVPYL-- 462 (491)
Q Consensus 395 ~~k~~kYsl~~p~~E-~l~~pl~~~~R~k~K-------~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~--~~~~~~-- 462 (491)
+ -++...+.-. |+-=.+| +.+.|.. .-+-++..|.|-++|+.+...+....+...-. ++...+
T Consensus 329 ~----~~~~~~~l~~sm~aDviD-~~e~~tG~R~eG~~~s~~~f~~K~~~al~~~i~g~~L~~~Gy~~~~~~q~~~~l~~ 403 (442)
T PRK09669 329 F----VQNTTTPLQWSMASDVVD-YEESRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYVGGAAVQSASVLTT 403 (442)
T ss_pred H----HHHHHHHHHHHHHHHHHH-HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf 9----999999989998775888-77860399850299999999999999999999999999839688998999999999
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf -------99999999999999999708999985349
Q gi|254780323|r 463 -------AVFFLCLMFIWIYVVNQLSKEYTQLISKE 491 (491)
Q Consensus 463 -------~~~~i~i~~~Wi~~~~~L~~~y~~~i~~~ 491 (491)
.-....+..+++..-++|.++-++.+++|
T Consensus 404 i~~~~~~~P~i~~~~~~~~~~~Y~L~~~~~~eI~~e 439 (442)
T PRK09669 404 IKLLFTVIPGVLFALMAVILSFYQLDDARVEAIAAE 439 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 999999999999999999997368989999999998
No 27
>PRK09848 glucuronide transporter; Provisional
Probab=98.98 E-value=9.8e-06 Score=63.03 Aligned_cols=188 Identities=15% Similarity=0.093 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999986409-8998999999998999999998899999963012322489-999999999999999999
Q gi|254780323|r 158 LWGAVMINLMFWQFANRITK-TEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYY-SMLTLILSSILLMAVYRW 235 (491)
Q Consensus 158 ~~~~~vis~~FW~~~n~~f~-~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ 235 (491)
.+..+.+ =++++..+.++ .+|--|+.+.-+.+++++.++.+..+.......+...... ........++....+...
T Consensus 122 ~~T~~~i--Py~aL~~elT~d~~eRt~l~~~r~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~ 199 (457)
T PRK09848 122 CYSLVNI--PYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFI 199 (457)
T ss_pred HHHHHHH--HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999984--69763713079999999999999999999999999999998625686007899999999999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 99840245223320000112345788899999983096799999999999999999999999999983299899999999
Q gi|254780323|r 236 MNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMG 315 (491)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g 315 (491)
... .+ ++...++.++.++++.+|.+.+||..+.+....++..+.............+....++...+.+.
T Consensus 200 ~~~---~~------~e~~~~~~~~~~~~~~~~~~~~N~~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~l~~~~~~~~~~- 269 (457)
T PRK09848 200 CFK---ST------RENVVRIVAQPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLV- 269 (457)
T ss_pred HHC---CC------CCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH-
T ss_conf 853---53------35644435686589999999837689999999999999999999999999999937866899999-
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999-99999978999973167899999999999999999
Q gi|254780323|r 316 QFIQWTGIVT-IVFMILGSNILKSFRWFTSAIITPLMILITGGGFF 360 (491)
Q Consensus 316 ~~~~~v~i~t-ii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff 360 (491)
.....++ ++...+.+++.+|+|-+.+..+.-++..++...++
T Consensus 270 ---~~~~~v~~i~~~p~~~~l~~r~gKk~~~~~~~~~~~~~~~~~~ 312 (457)
T PRK09848 270 ---LVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFF 312 (457)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ---9999999999999999999996679999999999999999999
No 28
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.93 E-value=1.5e-05 Score=61.56 Aligned_cols=324 Identities=14% Similarity=0.115 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999877886512-485446799999999999999999999996338999999999999999999
Q gi|254780323|r 30 IPMTLMMFLVLFNFSTLRPIKDSLVVPH-MGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAI 108 (491)
Q Consensus 30 ~~~~~~~F~i~~~y~~lr~~rd~l~~~~-~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~ 108 (491)
..+....|+........-|.=..+.-+. .+.+.+.++..... ....+..+..+++.||++|||.+.............
T Consensus 2 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~~~i~~~~~g~l~D~~grk~~~~~~~~~~~i~~i~ 80 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFS-LGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999997939999999999999-999999999999999809699999999999999999
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 99998421001465234555531010134457876555799999999999999999999999998640989989999999
Q gi|254780323|r 109 FAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATF 188 (491)
Q Consensus 109 f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li 188 (491)
.++. .+.|..........+-+..... ..-+.++|.++++|..+..+..
T Consensus 81 ~~~~-------------------------------~~~~~~~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~ 128 (352)
T cd06174 81 LAFA-------------------------------SSLWLLLVGRFLLGLGGGALYP-AAAALIAEWFPPKERGRALGLF 128 (352)
T ss_pred HHHH-------------------------------CCHHHHHHHHHHHHCCCCCHHH-HHHHHHHHCCCHHHHHHHHHHH
T ss_conf 9976-------------------------------3299999999998622100107-9999986048999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 98999999998899999963012322489999999999999999999998402452233200001123457888999999
Q gi|254780323|r 189 GLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRM 268 (491)
Q Consensus 189 ~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 268 (491)
..+.++|.++|+.....+.+..+-..... .................
T Consensus 129 ~~~~~~G~~ig~~i~~~l~~~~~~~~~~~---~~~~~~~~~~i~~~~~~------------------------------- 174 (352)
T cd06174 129 SAGFGLGALLGPLLGGLLAESLGWRWLFL---ILAILGLLLALLLLFLL------------------------------- 174 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHH---HHHHHHHHHHHHHHHHH-------------------------------
T ss_conf 98875678999999999998644899999---99999999999999999-------------------------------
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 83096799999999999999999999999999983299899999999999999999999999978999973167899999
Q gi|254780323|r 269 ALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIIT 348 (491)
Q Consensus 269 i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~ 348 (491)
|-...............+.....+.....+....+++... ......++..++.+.+.+++.+|+|.+......
T Consensus 175 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 247 (352)
T cd06174 175 ----RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAG---LLLSLFGLGGILGALLGGLLSDRLGRRRLLLLI 247 (352)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf ----9999999999999999999999999999982489877777---888999999999999999999982738999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHH
Q ss_conf 99999999999999841012346667873002079999999999999998763446466877752269767365777678
Q gi|254780323|r 349 PLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVD 428 (491)
Q Consensus 349 Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD 428 (491)
...+............. . .. . .....+.....-....+....+....|++.|.++-+...
T Consensus 248 --~~~~~~~~~~~~~~~~~-~-------------~~-~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (352)
T cd06174 248 --GLLLAALGLLLLALAPS-L-------------AL-L---LVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFN 307 (352)
T ss_pred --HHHHHHHHHHHHHHHHH-H-------------HH-H---HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf --99999999999998865-9-------------99-9---999999999999999999999999879607999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 88764667779999999999
Q gi|254780323|r 429 VIGGRMAKSGGAVIQSFIFM 448 (491)
Q Consensus 429 ~~~~r~Gk~~gs~~~~~l~~ 448 (491)
. ....|-..+..+...+..
T Consensus 308 ~-~~~~g~~i~~~i~g~i~~ 326 (352)
T cd06174 308 T-FGSLGGALGPLLAGLLLD 326 (352)
T ss_pred H-HHHHHHHHHHHHHHHHHH
T ss_conf 9-999999999999999999
No 29
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.93 E-value=1.5e-05 Score=61.50 Aligned_cols=276 Identities=7% Similarity=-0.014 Sum_probs=138.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999877886512-48544679999999999999999999999633899999999999999999999
Q gi|254780323|r 32 MTLMMFLVLFNFSTLRPIKDSLVVPH-MGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFA 110 (491)
Q Consensus 32 ~~~~~F~i~~~y~~lr~~rd~l~~~~-~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~ 110 (491)
++.+..+--.+-.+.-|.=..+.-+- .+++.....-. .-+...-+...+|+.++||++||+++..-...|.+.-++.+
T Consensus 8 ~~~l~~l~plaiD~ylPalP~i~~~f~~s~~~~qltis-~f~~g~a~~ql~~GplsD~~GRr~vll~gl~l~~i~s~~~~ 86 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFS-VYLAGMAAAMLFAGKIADRSGRKPVAIPGALLFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998899999996199999997979999999999-99999999999989999984883999999999999999999
Q ss_pred HHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 99842100146523455553101013445787655579999999999999999999999999864098998999999998
Q gi|254780323|r 111 FLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATFGL 190 (491)
Q Consensus 111 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~ 190 (491)
+. ++- +..-..=..-.+-+..... .=.+...|.++.+|..|.++.++.
T Consensus 87 ~a--~~~-----------------------------~~ll~~R~lqG~g~~~~~v-~~~aii~D~~~~~~~~~~~s~~~~ 134 (392)
T PRK10473 87 LA--ETS-----------------------------SLFLAGRFLQGLGAGCCYV-VAFAILRDTLDDRRRAKVLSLLNG 134 (392)
T ss_pred HH--CCH-----------------------------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 86--369-----------------------------9999999999968877999-999999997699999799899999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99999999889999996301232248999999999999999999999840245223320000112345788899999983
Q gi|254780323|r 191 VGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMAL 270 (491)
Q Consensus 191 g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ 270 (491)
+..++.++++.+...+.+..+ +...-..+...+..+..... ...+++ . +++++...+.....+..+
T Consensus 135 ~~~~~p~~aP~lGg~l~~~~g---W~~~F~~l~~~~~l~~l~~~---~~lpET----~----~~~~~~~~~~~~~~~~~l 200 (392)
T PRK10473 135 ITCIIPVLAPVLGHLIMLKFP---WQSLFYTMAAMGIAVLLLSL---FILKET----R----PARAPAASSKPRENSESL 200 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHH---HHCCCC----C----CCCCCCHHHHHHHHHHHH
T ss_conf 999988888889999998749---49999999999999999999---968788----9----987664024899999998
Q ss_pred CCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 096799999999-9999999999999999999832998999999999999999999999999789999731678999999
Q gi|254780323|r 271 NSKYLGYLVLLV-ICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITP 349 (491)
Q Consensus 271 ~s~yL~~l~~~v-~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~P 349 (491)
+||......... +.+......+...-.-..+...-++.+ +|.+........++..++.+++.+|+|.+.....--
T Consensus 201 ~~r~fl~~~l~~~l~~~~~f~fis~sp~i~~~~~gls~~~----fg~~f~~~~~~~~~gs~l~~~l~~r~g~~~ll~~g~ 276 (392)
T PRK10473 201 LNRFFLSRLVITTLSVSVILTFVNTSPVLLMEQMGFERGE----YAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQ 276 (392)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_conf 0823799999999999999999980799999991898899----999999999999999999999999957999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780323|r 350 LMILITGGG 358 (491)
Q Consensus 350 i~~li~~~~ 358 (491)
.+.+..+..
T Consensus 277 ~l~l~~~~~ 285 (392)
T PRK10473 277 VLFLAAGIT 285 (392)
T ss_pred HHHHHHHHH
T ss_conf 999999999
No 30
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.92 E-value=1.6e-05 Score=61.27 Aligned_cols=272 Identities=11% Similarity=0.058 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCHHHHHHH
Q ss_conf 2799999999999999999999--------877886512485446799999999999999-9999999963389999999
Q gi|254780323|r 27 KKFIPMTLMMFLVLFNFSTLRP--------IKDSLVVPHMGAEIISFVKLWCVFPSAILF-TILYMKLSNILETEKLFYV 97 (491)
Q Consensus 27 ~~~~~~~~~~F~i~~~y~~lr~--------~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~-~~~y~~l~~~~~~~~l~~~ 97 (491)
|..+-.++..|+--..||+.|. ++|++-+ +++.+=++- .++..+=.+ ...-+.+.+|.+.|+.+..
T Consensus 26 ~~~~~~f~~~figY~~~Y~~R~nfs~a~p~l~~elgl---s~~~lG~I~--Saf~i~Yaigkf~~G~l~Dr~~~R~fl~~ 100 (463)
T PRK09556 26 KPFMQSYLVVFIGYLTMYLIRKNFNIAQNDMIETYGL---SMTELGMIG--LGFSITYGVGKTLVSYYADGKNTKQFLPF 100 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC---CHHHHHHHH--HHHHHHHHHHHHCCHHHHHCCCCHHHHHH
T ss_conf 9999999999999999997020289767999988398---988999999--99999999987545244531574155999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999984210014652345555310101344578765557999999999999999999999999986409
Q gi|254780323|r 98 VVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITK 177 (491)
Q Consensus 98 ~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~ 177 (491)
-...-+++-.+|++....+.. +.+....+......+-..--. --...+++=|.
T Consensus 101 gl~ls~i~~~~fG~~~~~~~~--------------------------s~~~~~~l~~lnG~fQ~~GwP-~~~~~l~~WF~ 153 (463)
T PRK09556 101 MLILSAICMLGFSASMGSGSV--------------------------SLFLMIAFYALSGFFQSTGGP-CSYSTITKWTP 153 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--------------------------HHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHCC
T ss_conf 999999999999998863688--------------------------999999999998878445450-89999999739
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----------
Q ss_conf 899899999999899999999889999996301232248999999999999999999999840245223-----------
Q gi|254780323|r 178 TEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQ----------- 246 (491)
Q Consensus 178 ~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----------- 246 (491)
.+|-.+..|+-+...++|+++++.++.+........... ..+...++.+.............+|++
T Consensus 154 ~~eRG~~~giwn~s~nvG~~l~~~ia~~~~~~~~~~~~~---~~Fi~pgii~i~~~i~~~~~~~d~Pe~~Gl~~~ee~~~ 230 (463)
T PRK09556 154 RRKRGTYLGFWNISHNIGGAGAAGVALFGANYFFDGHVI---GMFIFPSIIALIIGFIGLRYGSDSPEEYGLGKAEELFG 230 (463)
T ss_pred CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHH---HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHC
T ss_conf 311213324774201037889999999999998243299---99999999999999999998179977759997565514
Q ss_pred -CCCCCCCCCCCCCCCHHHH-HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -3200001123457888999-99983096799999999999999999999999999983299899999999999999999
Q gi|254780323|r 247 -YSPKRGSVKKKLKLSVLES-LRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIV 324 (491)
Q Consensus 247 -~~~~~~~~~~~~~~~~~~~-~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~ 324 (491)
...++..++++++.+.++. .+.++++|.+..+++-.++..++..-+.+-.-.++.+...-+.+.+.+.....-+.+++
T Consensus 231 ~~~~~~~~~~~~~~~s~~~~~~~~vl~np~vw~lala~~f~y~Vryg~~~WlP~YL~~~~g~s~~~a~~~~~lfevggi~ 310 (463)
T PRK09556 231 EEISEEDKETESNDMTKWQIFVEYVLKNKVIWLLCFANIFLYIVRIGIDQWSPVYAFQELKFSKEDAIQGFTLFEIGALV 310 (463)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 54221111112234545789999997272999999999999999999987649999971499977876999999999998
Q ss_pred HHHHH-HHHH
Q ss_conf 99999-9978
Q gi|254780323|r 325 TIVFM-ILGS 333 (491)
Q Consensus 325 tii~q-ll~~ 333 (491)
.-+.. .++.
T Consensus 311 G~ll~G~iSD 320 (463)
T PRK09556 311 GTLLWGWLSD 320 (463)
T ss_pred HHHHHHHHHH
T ss_conf 9998989987
No 31
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.85 E-value=2.6e-05 Score=59.69 Aligned_cols=373 Identities=10% Similarity=0.009 Sum_probs=179.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 878112327999999999999999999998778865124-8544679999999999999999999999633899999999
Q gi|254780323|r 20 AVKMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHM-GAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVV 98 (491)
Q Consensus 20 ~i~~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~-g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~ 98 (491)
++-|.+|+-+....+..++-.+-..++-..-..+.-+-. +....-.+.. ..+....+-..+++++.+|++|++.+...
T Consensus 6 ~lsr~qw~i~~~~~lg~~~d~~D~~~~~~~~p~i~~~~~ls~~~~g~~~s-~~~~g~~iGa~~~G~laDr~GRr~~~~~~ 84 (486)
T PRK03893 6 HLNRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLIS-AAFISRWFGGLLLGAMGDRYGRRLAMVIS 84 (486)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 79999999999999999999999999999999999885979889999999-99999999999999999984569999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 99999999999999842100146523455553101013445787655579999999999999999999999999864098
Q gi|254780323|r 99 VSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKT 178 (491)
Q Consensus 99 ~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~ 178 (491)
...|.++-.+-++.- +. +....+=....+-.--.... =-++++|....
T Consensus 85 ~~~~~~~~~~~a~a~---------~~----------------------~~l~~~R~l~G~g~Gg~~~~-~~~~~~E~~P~ 132 (486)
T PRK03893 85 IVLFSAGTLACGFAP---------GY----------------------TTMFIARLVIGMGMAGEYGS-SATYVIESWPK 132 (486)
T ss_pred HHHHHHHHHHHHHHC---------CH----------------------HHHHHHHHHHHCCCCCCHHH-HHHHHHHHCCH
T ss_conf 999999999999828---------89----------------------99999999974226120248-99999987756
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC----
Q ss_conf 9989999999989999999988999999630123224899999999999999999999984024522332000011----
Q gi|254780323|r 179 EEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSV---- 254 (491)
Q Consensus 179 ~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---- 254 (491)
++..|..+++..|-++|.++++.....+....+ +...... +.....+..++....+..++....+..++
T Consensus 133 ~~Rg~~~~~~~~g~~~G~~la~~~~~~~~~~~g---WR~~f~i----G~lP~ll~l~lr~~LPESprwl~~~~~~~~~~~ 205 (486)
T PRK03893 133 HLRNKASGFLISGFSIGAVLAAQVYSLVVPVWG---WRALFFI----GILPIIFALWLRKNLPEAEDWKEKHAGKAPVRT 205 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---HHHHHHH----HHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHH
T ss_conf 047999999999999999999999999811535---6999999----999999999999809998789987652315778
Q ss_pred -------CCCCC----------CCHHHHHHHHHC-------------------------CHHHHHHHHHHHHHHHHHHHH
Q ss_conf -------23457----------888999999830-------------------------967999999999999999999
Q gi|254780323|r 255 -------KKKLK----------LSVLESLRMALN-------------------------SKYLGYLVLLVICYGTAINLV 292 (491)
Q Consensus 255 -------~~~~~----------~~~~~~~k~i~~-------------------------s~yL~~l~~~v~~~~~~~tl~ 292 (491)
.++.. .........-.+ .+....+..+... ....+.
T Consensus 206 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~--~~~fl~ 283 (486)
T PRK03893 206 MVDILYRGEHRILNIVLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVV--LFAFLY 283 (486)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH
T ss_conf 999985134421024553200035666520223420468889998889999999873135789999999999--999999
Q ss_pred HH---HHH-HHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99---999-999-9832998999999999999999999999999789999731678999999999999999999984101
Q gi|254780323|r 293 EG---PWK-EKV-RQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFFVFVIFED 367 (491)
Q Consensus 293 e~---~~k-~~~-~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~ 367 (491)
.+ .|. ... ++..-++.+...+ ..+.+...++-.++.+++.+|+|-+.+..+.-+...+.....+.. ..
T Consensus 284 ~w~~~~~lPt~L~~~~g~~~~~~~~~----~~~~~lg~~vG~l~~g~L~DriGrr~~~~~~~l~~~~~~~~l~~~---~~ 356 (486)
T PRK03893 284 SWPIQALLPTYLKTDLGYDPHTVANV----LFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAI---GG 356 (486)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH---CC
T ss_conf 98899999999997518888899999----999999999999999999989485899999999999999999997---56
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 23466678730020799999999999999987634464668777522697673657776788876466777999999999
Q gi|254780323|r 368 ALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIF 447 (491)
Q Consensus 368 ~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~ 447 (491)
.... .+. ....+.+....+.+-......----|.+.|..+-.+.-+++ |+|-..|-++...+.
T Consensus 357 ------------~~~~-~l~---~l~f~~~~~~~G~~~~~~~y~~E~yPT~vRaTG~G~a~~vG-RlG~ii~P~i~g~L~ 419 (486)
T PRK03893 357 ------------ANVW-VLG---LLLFFQQMLGQGIAGLLPKLIGGYFDTEQRAAGLGFTYNVG-ALGGALAPILGALIA 419 (486)
T ss_pred ------------CHHH-HHH---HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_conf ------------4699-999---99999999999999999999887488969889999999999-999999999999998
Q ss_pred HHHHCCHHHHH
Q ss_conf 98300002333
Q gi|254780323|r 448 MLFPMATFSSI 458 (491)
Q Consensus 448 ~~~~~~~~~~~ 458 (491)
.-++.+..-..
T Consensus 420 ~~~~lg~~~~~ 430 (486)
T PRK03893 420 QRLGLGTALGS 430 (486)
T ss_pred HCCCCHHHHHH
T ss_conf 70895189999
No 32
>PRK03699 hypothetical protein; Provisional
Probab=98.82 E-value=3.3e-05 Score=58.84 Aligned_cols=274 Identities=13% Similarity=0.056 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 32799999999999999999----99987788651248544679999999999999999999999633899999999999
Q gi|254780323|r 26 AKKFIPMTLMMFLVLFNFST----LRPIKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSF 101 (491)
Q Consensus 26 ~~~~~~~~~~~F~i~~~y~~----lr~~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~ 101 (491)
.+-.+..++.+|+.+..-.. +-+++|..-++..+. ..+..... ...++....-+++.+|++|+|..-.-...
T Consensus 6 ~~l~~~~fl~ff~~G~~~~~~G~~iP~i~~~f~ls~~~~---g~i~s~~~-iG~li~~~~~g~L~~k~G~k~~l~~g~~l 81 (394)
T PRK03699 6 IKLTWISFLSYALTAALVIVTGMVMGPIAEYFNLPVSSM---SNTFTFLN-AGILISIFLNAWLMEIIPLKRQLRFGFIL 81 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH---HHHHHHHH-HHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 699999999999999899869985899999949599999---99999999-99999999999999995950999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 99999999999842100146523455553101013445787655579999999999999999999999999864098998
Q gi|254780323|r 102 FVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEA 181 (491)
Q Consensus 102 f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qa 181 (491)
+.+..+.+++. | +.|..........+=+-...+. =-...++..+.++.
T Consensus 82 ~~i~~l~~~~~--~-----------------------------s~~~l~v~~fl~Glg~G~~~~~-~~~~i~~~~~~~~r 129 (394)
T PRK03699 82 MVLAVAGLMFS--H-----------------------------SLALFSIAMFVLGLVSGITMSI-GTFLITHVYEGRQR 129 (394)
T ss_pred HHHHHHHHHHC--C-----------------------------CHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCHHHH
T ss_conf 99999999981--5-----------------------------2999999999998678999988-99999997060078
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999899999999889999996301232248999999999999999999999840245223320000112345788
Q gi|254780323|r 182 TRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLS 261 (491)
Q Consensus 182 KRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (491)
.+.-....+.-++|+.+++.++..+......-...+....... +... .. ... .+.|..++.++++++++.+.
T Consensus 130 ~~~l~~~~~~f~vGa~i~Pli~~~ll~~~~~W~~~y~~~~~~~--~~~~-~~-~~~---~~~p~~~~~~~~~~~~~~~~- 201 (394)
T PRK03699 130 GSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYLCIGLVA--VAIF-IL-TLF---SEFPALGKHAPKTEAPVVKS- 201 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH--HHHH-HH-HHH---CCCCCCCCCCCCCCCCHHHH-
T ss_conf 8999999999988999999999999856998899999999999--9999-99-998---25873222455332320343-
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 899999983096799999999999999999999999-999983299899999-999999999999999999978999973
Q gi|254780323|r 262 VLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWK-EKVRQLYPTQNSYAQ-FMGQFIQWTGIVTIVFMILGSNILKSF 339 (491)
Q Consensus 262 ~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k-~~~~~~~~~~~~~~a-f~g~~~~~v~i~tii~qll~~~ll~r~ 339 (491)
..++.+..++...++|.....-+- .|. .+.++...-+.+.++ ..+.| + ....+--++++++.+|+
T Consensus 202 --------~~~~~~~~~~i~~f~yv~~e~~~~-~W~ptyl~~~~g~~~~~A~~~~S~f--w--~~~~iGrl~~~~l~~r~ 268 (394)
T PRK03699 202 --------KWNFGVIFLAIAALLYILAQLTFI-SWVPEYAQKKFGMSLEDAGNLVSNF--W--MAYMVGMWIFSFILRFF 268 (394)
T ss_pred --------HCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCHHHHHHHHHHH--H--HHHHHHHHHHHHHHHHH
T ss_conf --------026089999999999999999999-9999999982799988999999999--9--99999999999999884
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 16789999999999999
Q gi|254780323|r 340 RWFTSAIITPLMILITG 356 (491)
Q Consensus 340 G~~~~l~i~Pi~~li~~ 356 (491)
+.+..+.+.....++..
T Consensus 269 ~~~~~l~~~~~~a~~~~ 285 (394)
T PRK03699 269 DLQRILTVLAGLALVLM 285 (394)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 37999999999999999
No 33
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.81 E-value=3.6e-05 Score=58.58 Aligned_cols=263 Identities=13% Similarity=0.108 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHHHHHHH--------HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 99999999999999999--------8778865124854467999999999999999999999963389999999999999
Q gi|254780323|r 32 MTLMMFLVLFNFSTLRP--------IKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFV 103 (491)
Q Consensus 32 ~~~~~F~i~~~y~~lr~--------~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~ 103 (491)
..+..|+.-..+|+-|. +++.+-+ +.+.+-++-....+ .-.+....-+++.+|+++|+++..-....+
T Consensus 24 i~~~~fl~Y~~~y~~R~~~s~~~p~i~~e~gl---t~~q~G~i~s~f~~-~Yal~q~~~G~L~Dr~g~r~~l~~~~~~~~ 99 (434)
T PRK11663 24 IMITMYLGYALFYFTRKSFNAAMPEMLADLGL---SRSDIGLLATLFYI-TYGVSKFVSGIVSDRSNPRYFMGIGLIATG 99 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 99999999999998605799869999988497---99899999999999-999999767999987064499999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 99999999984210014652345555310101344578765557999999999999999999999999986409899899
Q gi|254780323|r 104 SFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATR 183 (491)
Q Consensus 104 ~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKR 183 (491)
+.-+++++.= +.|.....+....+.......-. -...++-|..+|-.|
T Consensus 100 ~~~~~~g~~~-------------------------------~~~~~~~~r~l~G~~~~~~~p~~-~~~i~~Wfp~~eRg~ 147 (434)
T PRK11663 100 IINILFGFSS-------------------------------SLWAFALLWVLNAFFQGWGWPVC-AKLLTAWYSRTERGG 147 (434)
T ss_pred HHHHHHHHHC-------------------------------CHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCHHHHHH
T ss_conf 9999999743-------------------------------28999999999999856016899-999999848888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC----------CC-CCC
Q ss_conf 9999998999999998899999963012322489999999999999999999998402452233----------20-000
Q gi|254780323|r 184 FYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQY----------SP-KRG 252 (491)
Q Consensus 184 lf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----------~~-~~~ 252 (491)
..++.+.+.++|+.+++..+..+....+ +...-......++....+..+. ...+|++. +. +..
T Consensus 148 a~gi~~~~~~vG~~l~~~l~~~i~~~~g---Wr~~F~~~g~~~~v~~~~~~~~---~~d~P~~~g~~~~~~~~~~~~~~~ 221 (434)
T PRK11663 148 WWAIWNTAHNVGGALIPLVVGAIALHYG---WRYGMIIAGIIAIVVGLFLCWR---LRDRPQAMGLPSVGEWRHDALELA 221 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHH---CCCCHHHCCCCCHHHHCCCHHHHH
T ss_conf 9999999987778888999999999806---2999999999999999999983---268876649997112102345554
Q ss_pred CCCCCCCCCHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 11234578889999-99830967999999999999999999999999999832998999999999999999999999999
Q gi|254780323|r 253 SVKKKLKLSVLESL-RMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMIL 331 (491)
Q Consensus 253 ~~~~~~~~~~~~~~-k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll 331 (491)
+++++.+.+..+-. |.++++|.+..++...++.......+..-.-.+..+...-+.+.+........+.++ +-.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~WlP~yL~~~~g~s~~~a~~~~~l~~ig~~---iG~l~ 298 (434)
T PRK11663 222 QEQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYLSETLGYDLVTANSAVSMFELGGF---IGSLV 298 (434)
T ss_pred HHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHH---HHHHH
T ss_conf 330245775899999999648899999999999999999998326588887608889999999999999999---99998
Q ss_pred HHHHHHHH
Q ss_conf 78999973
Q gi|254780323|r 332 GSNILKSF 339 (491)
Q Consensus 332 ~~~ll~r~ 339 (491)
++++-.|+
T Consensus 299 ~G~lSDrl 306 (434)
T PRK11663 299 AGWGSDKL 306 (434)
T ss_pred HHHHHHHH
T ss_conf 88999987
No 34
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.72 E-value=6.5e-05 Score=56.54 Aligned_cols=273 Identities=10% Similarity=0.001 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHHCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999877----88651248544679999999999999-999999999633899999999999999
Q gi|254780323|r 30 IPMTLMMFLVLFNFSTLRPIKD----SLVVPHMGAEIISFVKLWCVFPSAIL-FTILYMKLSNILETEKLFYVVVSFFVS 104 (491)
Q Consensus 30 ~~~~~~~F~i~~~y~~lr~~rd----~l~~~~~g~e~lp~l~~~~~l~~s~~-~~~~y~~l~~~~~~~~l~~~~~~~f~~ 104 (491)
+......|+.-..||+-|..=. .+.-+..++..+=++. .++..+-. ....-+++.+|+++|+++..-....++
T Consensus 28 w~i~~~lfi~y~~~Y~dR~~~sva~p~i~e~gls~~q~G~i~--S~F~~~Yal~q~~~G~l~Dr~g~r~~l~~gl~~~s~ 105 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFAL--SGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAA 105 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 999999999999999811589987899988299988999999--999999999986127778605742999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHCCHHHH
Q ss_conf 9999999984210014652345555310101344578765557999999999999999---9999999999864098998
Q gi|254780323|r 105 FFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAV---MINLMFWQFANRITKTEEA 181 (491)
Q Consensus 105 ~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~---vis~~FW~~~n~~f~~~qa 181 (491)
.-+++++.-+.... .+ .+++.--+.|.. .-. --...+++=|.++|-
T Consensus 106 ~~~l~G~~~~~~~s---------------------------~~---~~~~lr~l~G~~eg~~~p-~~~k~i~~WFp~~eR 154 (452)
T PRK11273 106 VMLFMGFVPWATSS---------------------------IA---VMFVLLFLCGWFQGMGWP-PCGRTMVHWWSQKER 154 (452)
T ss_pred HHHHHHHHHHHHHH---------------------------HH---HHHHHHHHHHHHHHCCHH-HHHHHHHHHCCHHHH
T ss_conf 99999999878879---------------------------99---999999998865201018-999999997799899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-------C-CCCC
Q ss_conf 9999999989999999988999999630123224899999999999999999999984024522332-------0-0001
Q gi|254780323|r 182 TRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYS-------P-KRGS 253 (491)
Q Consensus 182 KRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------~-~~~~ 253 (491)
.|..++.+.+.++|+.+.+.+........+ .+...-......++....+.....+..+++....+ . ++.+
T Consensus 155 g~a~gi~~~~~~vG~~l~~~l~~~~~~~~~--gWr~~F~i~g~~~l~~~v~~~~~~~d~P~~~g~~~~e~~~~~~~~~~~ 232 (452)
T PRK11273 155 GGIVSVWNCAHNVGGGLPPLLFLLGMAWFN--DWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYN 232 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHCCCCCCC
T ss_conf 999999999867899999999999999974--699999999999999999999982378210599966777420111133
Q ss_pred CCCCCCCCHH-HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH-HH
Q ss_conf 1234578889-999998309679999999999999999999999999998329989999999999999999999999-99
Q gi|254780323|r 254 VKKKLKLSVL-ESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFM-IL 331 (491)
Q Consensus 254 ~~~~~~~~~~-~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~q-ll 331 (491)
++++++.+.. -..+.++++|.+..+++..++...+...+..-.-.++.+...-+.+.+.+......+.+++..++- .+
T Consensus 233 ~~~~~~~~~~~~~~~~il~~~~~w~l~l~~~~~~~~~yg~~~WlP~YL~~~~g~s~~~~~~~~~l~~~~g~~G~l~~G~l 312 (452)
T PRK11273 233 EKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWM 312 (452)
T ss_pred CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 21112232567889998046089999999999999999971538999986248888888799999999999989989999
Q ss_pred HHHHHH
Q ss_conf 789999
Q gi|254780323|r 332 GSNILK 337 (491)
Q Consensus 332 ~~~ll~ 337 (491)
+.++++
T Consensus 313 SDrl~~ 318 (452)
T PRK11273 313 SDKVFR 318 (452)
T ss_pred HHHHHH
T ss_conf 999873
No 35
>pfam00083 Sugar_tr Sugar (and other) transporter.
Probab=98.58 E-value=0.00015 Score=53.65 Aligned_cols=112 Identities=13% Similarity=0.062 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999996338999999999999999999999984210014652345555310101344578765557999999
Q gi|254780323|r 74 SAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFY 153 (491)
Q Consensus 74 ~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fY 153 (491)
.+++-..+.+++.||++||+.+......+.+.-++.++.- +. +.|.....=
T Consensus 58 G~~iG~~~~G~l~Dr~GRk~~l~~~~~~~~i~~~l~~~a~--~~---------------------------~~~~l~i~R 108 (449)
T pfam00083 58 GCLIGSLFAGKLGDRFGRKKSLLIGNVLFVIGALLQGFAK--GK---------------------------SFYMLIVGR 108 (449)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC--CC---------------------------HHHHHHHHH
T ss_conf 9999999999998740779999999999999999999867--57---------------------------399999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 99999999999999999998640989989999999989999999988999999630123224
Q gi|254780323|r 154 VFAELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMI 215 (491)
Q Consensus 154 v~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~ 215 (491)
....+-...... .-..+++|...+++..|.-++...+.++|.++++.+...+....+...+
T Consensus 109 ~l~G~~~G~~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~W 169 (449)
T pfam00083 109 VIVGLGVGGISV-LVPMYISEIAPKKLRGALGSLYQLGITFGILVAAIIGLGLNKYSNSDGW 169 (449)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf 999999999999-9999999868873446878988788889999999999999514886430
No 36
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.56 E-value=0.00017 Score=53.18 Aligned_cols=354 Identities=9% Similarity=-0.008 Sum_probs=193.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 3878112327999999999999999999998778865124-854467999999999999999999999963389999999
Q gi|254780323|r 19 CAVKMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHM-GAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYV 97 (491)
Q Consensus 19 ~~i~~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~-g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~ 97 (491)
-++.|..|-.++.+.+.-|++...=++.=.+=+.+.-+-. .....=++-...++ ...+..|.-..+.+|++||++.-.
T Consensus 12 ~~~~~~~W~av~~La~~~F~~~ttEf~~~GlLp~iA~dl~Vs~~~aG~lVT~yAl-~~ai~aP~l~~lt~r~~Rr~lLl~ 90 (394)
T PRK10213 12 DAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAF-VAMFASLFITQTIQATDRRYVVIL 90 (394)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 7656455699999999999999899999974398996779997899999999999-999988999998667883899999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999984210014652345555310101344578765557999999999999999999999999986409
Q gi|254780323|r 98 VVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITK 177 (491)
Q Consensus 98 ~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~ 177 (491)
....|.+.=.+.++- | +. +..-..=+...+-.-...++. .+.+.+...
T Consensus 91 ~l~~f~~~n~l~Ala--~-------~f----------------------~~Ll~~R~l~g~~~g~f~~~a-~~~a~~lvp 138 (394)
T PRK10213 91 FAVLLTLSCLLVSFA--N-------SF----------------------SLLLIGRACLGLALGGFWAMS-ASLTMRLVP 138 (394)
T ss_pred HHHHHHHHHHHHHHH--C-------CH----------------------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHCC
T ss_conf 999999999999994--8-------79----------------------999999999982547899999-999999769
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 89989999999989999999988999999630123224899999999999999999999984024522332000011234
Q gi|254780323|r 178 TEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKK 257 (491)
Q Consensus 178 ~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (491)
+|+..|--+.+..|-+++.++|--...++.+..+ +...-......+..+... +....++.+.+
T Consensus 139 ~~~~grAiaiv~~G~s~A~v~GvPlgt~ig~~~G---WR~~F~~ia~l~~i~~~~---~~~~lP~~~~~----------- 201 (394)
T PRK10213 139 PRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG---WRNVFNAAAVMGVLCIFW---IIKSLPSLPGE----------- 201 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHH---HHHHCCCCCCC-----------
T ss_conf 3022369999988999999982108988860013---999999999999999999---99837778888-----------
Q ss_pred CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 57888999999830967999999999999999999999999-999832-9989999999999999999999999997899
Q gi|254780323|r 258 LKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKE-KVRQLY-PTQNSYAQFMGQFIQWTGIVTIVFMILGSNI 335 (491)
Q Consensus 258 ~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~-~~~~~~-~~~~~~~af~g~~~~~v~i~tii~qll~~~l 335 (491)
++.+..+ ....+|+|-++......+ ......+.-|.|-. ..++.. -++++.+.. -..-|+.+++=.++++++
T Consensus 202 ~~~~~~~-~~~~l~~~~v~~~l~~~~-l~~~g~f~~yTYi~p~l~~~~g~~~~~is~~----L~~fGi~~~~Gn~l~G~l 275 (394)
T PRK10213 202 PSHQKQN-TFRLLQRPGVMAGMIAIF-MSFAGQFAFFTYIRPVYMNLAGFGVDGLTLV----LLSFGIASFVGTSLSSFI 275 (394)
T ss_pred CCCCHHH-HHHHHCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_conf 8756578-999956789999999999-9999999989967999998418986489999----999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
Q ss_conf 99731678999999999999999999984101234666787300207999999999999999876344646687775226
Q gi|254780323|r 336 LKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPL 415 (491)
Q Consensus 336 l~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl 415 (491)
.+|.. +....+.|..+.+....+.... ...... . ....+| ..-++...|..|..-...
T Consensus 276 ~dr~~-~~~l~~~~~~l~~~~~~l~~~~---~~~~~~-~-------~~~~lw----------G~~~~~~~~~~q~~i~~~ 333 (394)
T PRK10213 276 LKRSV-KLALAGAPLVLALSALVLTLWG---SDKIVA-T-------GVAIIW----------GLTFALVPVGWSTWITRS 333 (394)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHH---HHHHHH-H-------HHHHHH----------HHHHHHHHHHHHHHHHHH
T ss_conf 63108-7899999999999999999987---459999-9-------999999----------999998899999999987
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 976736577767888764667779999999999830
Q gi|254780323|r 416 DDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFP 451 (491)
Q Consensus 416 ~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~ 451 (491)
.+|.+..+.+.. .-...+|-+.|+.++.....-++
T Consensus 334 a~~a~~~a~al~-~safnlgia~Ga~iGG~~l~~~G 368 (394)
T PRK10213 334 LADQAEKAGSIQ-VAVIQLANTCGAAIGGYALDNIG 368 (394)
T ss_pred CCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 868676999999-99999999999999999997657
No 37
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily; InterPro: IPR004812 The drug resistance transporter Bcr/CflA proteins are predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in Escherichia coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=98.53 E-value=0.00021 Score=52.59 Aligned_cols=264 Identities=17% Similarity=0.141 Sum_probs=159.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCC---------CHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 99999999999998778865124---------8544679999999999999-9999999996338999999999999999
Q gi|254780323|r 36 MFLVLFNFSTLRPIKDSLVVPHM---------GAEIISFVKLWCVFPSAIL-FTILYMKLSNILETEKLFYVVVSFFVSF 105 (491)
Q Consensus 36 ~F~i~~~y~~lr~~rd~l~~~~~---------g~e~lp~l~~~~~l~~s~~-~~~~y~~l~~~~~~~~l~~~~~~~f~~~ 105 (491)
+-+++....+|-|+...+=+... +++...- +......++. -..+|+.++|+++||+++-.-...|++.
T Consensus 6 ~~~~L~~L~~L~pl~~DMYLPa~p~i~~~L~~~as~vQ~--tLt~yl~G~a~GQL~~GPlSD~~GRrPvlL~G~~~fa~~ 83 (400)
T TIGR00710 6 FVLLLGLLSILGPLGIDMYLPAFPEIAKDLSVSASLVQL--TLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLLIFALS 83 (400)
T ss_pred HHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 999998987632021125212078989862878668999--999999999998986523332036723889999999999
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHH
Q ss_conf 999999984210014652345555310101344578765557999999999999999999999999986409-8998999
Q gi|254780323|r 106 FAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITK-TEEATRF 184 (491)
Q Consensus 106 ~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~-~~qaKRl 184 (491)
-+.... .+|-+ ....+|.+. -|-+.+ -.|+ --+.+-|+|+ .||-.|.
T Consensus 84 Sl~~~~--~~ni~--------------~L~~lRF~Q---------a~gasA----~~V~---~~AlvRD~Y~G~~e~s~~ 131 (400)
T TIGR00710 84 SLGLAL--SNNIE--------------TLLVLRFLQ---------AFGASA----ALVI---SQALVRDIYPGREELSKI 131 (400)
T ss_pred HHHHHH--HHHHH--------------HHHHHHHHH---------HHHHHH----HHHH---HHHHHHHCCCCHHHHHHH
T ss_conf 999999--85199--------------999999999---------999989----9999---998885020325789999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999899999999889999--9963012322489999999999999999999998402452233200001123457888
Q gi|254780323|r 185 YATFGLVGNVGLIFAGGIVK--TFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSV 262 (491)
Q Consensus 185 f~li~~g~~ig~i~gg~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (491)
|+.++.--.+.-.+|+.+.. ++..+.+ +...-..+.+.++...++...+-.+. +++++.++.+.+ .-
T Consensus 132 ~s~l~~~~~~~P~~aP~~Ggai~~~~~l~---WhaIF~~L~l~~~~l~a~~f~~~pET-------~~~~~r~P~~~~-~~ 200 (400)
T TIGR00710 132 YSILMLVLALAPAVAPLIGGAIYVLVFLS---WHAIFAVLSLIGILLSALIFFLLPET-------LPKEKRIPLQIS-TS 200 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHCCCC-------CCHHCCCCHHHH-HH
T ss_conf 99999999999878888869999998520---99999999999999999999855122-------740103740300-13
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999830967999999999999999999999999999832998999-9999999999999999999997899997316
Q gi|254780323|r 263 LESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSY-AQFMGQFIQWTGIVTIVFMILGSNILKSFRW 341 (491)
Q Consensus 263 ~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~-~af~g~~~~~v~i~tii~qll~~~ll~r~G~ 341 (491)
.+.+..+.|||-.++-++.+ +.+. =..|.|....--.+.|+... .+.||.++..+.+..++.-++.+|.++|.|-
T Consensus 201 ~~~f~~l~k~k~~~gY~L~~---ga~~-g~~Faf~~~~Pfv~~~~~gVsp~~fg~lf~~~~~a~i~g~f~~gr~~~k~~~ 276 (400)
T TIGR00710 201 VETFLLLLKDKEFLGYALIY---GASF-GGFFAFLSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKIGA 276 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHH-HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99986788768889999999---9986-8789999841788640014656778999999999999999999866654310
Q ss_pred HHHHHHH
Q ss_conf 7899999
Q gi|254780323|r 342 FTSAIIT 348 (491)
Q Consensus 342 ~~~l~i~ 348 (491)
...+...
T Consensus 277 ~~~lr~~ 283 (400)
T TIGR00710 277 KSLLRIA 283 (400)
T ss_pred CHHHHHH
T ss_conf 0147899
No 38
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.52 E-value=0.00021 Score=52.55 Aligned_cols=380 Identities=14% Similarity=0.180 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----HHH--HHHHHHHHHHH
Q ss_conf 9999999999999999877886512-485446799999999999999999999996338-----999--99999999999
Q gi|254780323|r 33 TLMMFLVLFNFSTLRPIKDSLVVPH-MGAEIISFVKLWCVFPSAILFTILYMKLSNILE-----TEK--LFYVVVSFFVS 104 (491)
Q Consensus 33 ~~~~F~i~~~y~~lr~~rd~l~~~~-~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~-----~~~--l~~~~~~~f~~ 104 (491)
....|--+.-|.+.-..=....-++ .+.+.+-++. ...+|-++.+ +.+-+.+|++ ||| ++..-. ..++
T Consensus 5 ~~Lyfa~GlP~~~~~~~l~~~Lr~~Gvsl~~IGl~~-ll~LPw~lKf--LWAP~vDr~~~p~lG~rR~Wil~~Q~-~l~~ 80 (402)
T PRK11902 5 LVLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFS-LVGQAYIFKF--LWAPLMDRYTPPLLGRRRGWLLLTQV-GLAA 80 (402)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHHHHHHH--HHHHHHHCCCCCCCCCCHHHHHHHHH-HHHH
T ss_conf 999998764399999999999988799889999999-9999999999--99888864077668874079999999-9999
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 99999999842100146523455553101013445787655579999999999999999999999999864098998999
Q gi|254780323|r 105 FFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRF 184 (491)
Q Consensus 105 ~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRl 184 (491)
.+...++ ..|+. +-|.....-.....++...= +.-=++.-|..+++|-...
T Consensus 81 ~l~~la~--------~~p~~--------------------~~~~l~~~~~l~af~sAtqD-IA~Da~~ie~l~~~e~g~~ 131 (402)
T PRK11902 81 SIMAMAF--------LPPHS--------------------ALWPLALLAVLVAFLSASQD-IVFDAYSTDVLRPEERGAG 131 (402)
T ss_pred HHHHHHC--------CCHHH--------------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCHHHHHHH
T ss_conf 9999980--------79666--------------------79999999999999999999-9998999985599889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 9999989999999988999999630-123224899999999999999999999984024522332000011234578889
Q gi|254780323|r 185 YATFGLVGNVGLIFAGGIVKTFSKL-TNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVL 263 (491)
Q Consensus 185 f~li~~g~~ig~i~gg~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (491)
-+.-..|..+|.++||...-.+.+. .+=.........++ .+..+.. . ..++++. ++ +.+++.+....
T Consensus 132 n~~~v~Gyr~g~ligGg~~l~l~~~~~gW~~~~~~la~l~----ll~~~~~-l---~~~e~~~--~~--~~~~~~~~~~~ 199 (402)
T PRK11902 132 AAVKVLGYRLAMLVSGGLALILADRVLGWGNTYLLMAGLM----LAGALTT-L---WAPEPEV--PA--RAPRSLGEAVV 199 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH-H---HCCCCCC--CC--CCCHHHHHHHH
T ss_conf 9999999999999989999999998886999999999999----9999999-9---2888775--44--24103789999
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q ss_conf 9999983096799999999999999999999999999-9832998999999999999999999-9999997899997316
Q gi|254780323|r 264 ESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKV-RQLYPTQNSYAQFMGQFIQWTGIVT-IVFMILGSNILKSFRW 341 (491)
Q Consensus 264 ~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~-~~~~~~~~~~~af~g~~~~~v~i~t-ii~qll~~~ll~r~G~ 341 (491)
+.++..++.|-...+..++++|.....+.....+-.. ++..=+.+|.....+ ..|... ++--++++.+++|+|.
T Consensus 200 ~~~~~f~~r~~~~~~l~fillyrlgd~~~~~m~~pFll~dlG~s~~~ig~~~~----~~G~~a~i~G~~lGG~l~~r~g~ 275 (402)
T PRK11902 200 GPLRDFFSRRGAWWLLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNK----TLGLAATIVGALAGGSLMVRLGL 275 (402)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999997267999999999999899999998789999752999999999987----99999999999999999999738
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCH
Q ss_conf 789999999999999999999841012346667873002----0799999999999999987634464668777522697
Q gi|254780323|r 342 FTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLV----PLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDD 417 (491)
Q Consensus 342 ~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~----~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~ 417 (491)
+..+.+.-+...+....+...+..++.... ....+... .+...++...+....+ +--+
T Consensus 276 ~~~L~~~~~~~~l~~l~~~~la~~~~~~~~-l~~~i~~~~~~~g~~~~a~~a~~m~l~~-----------------~~~~ 337 (402)
T PRK11902 276 YRSLMLFGVLQAVSNLGYWLLAVTPKHLWL-MGLAIGVENLCGGMGTAAFVALLMALCN-----------------RSFS 337 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------------CCCC
T ss_conf 999999999999999999999966775799-9999999999999999999999999828-----------------8663
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 6736577767888764667779999999999830000233379999999999999999999970899998534
Q gi|254780323|r 418 EFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVNQLSKEYTQLISK 490 (491)
Q Consensus 418 ~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~~~~L~~~y~~~i~~ 490 (491)
..-|-..+-++.++..+..+.++.+...+ +.... +. ....+++.=+...+.++|++|+..+|
T Consensus 338 atqyal~~sl~~l~~~~~~~~sG~la~~~----Gy~~f-----Fi--~~~~~~ip~l~ll~~~~~~~~~~~~~ 399 (402)
T PRK11902 338 ATQYALLSALASVGRVYVGPTSGYLVEAL----GWPGF-----YL--GTVLIALPGLALLWLMRNTIDRYEAQ 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCHHH-----HH--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999998999884399999981----96999-----99--99999999999999988898876654
No 39
>PRK11043 inner membrane transport protein YdhC; Provisional
Probab=98.52 E-value=0.00021 Score=52.49 Aligned_cols=272 Identities=12% Similarity=0.008 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999877886512-4854467999999999999-999999999963389999999999999999999999842
Q gi|254780323|r 38 LVLFNFSTLRPIKDSLVVPH-MGAEIISFVKLWCVFPSAI-LFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYP 115 (491)
Q Consensus 38 ~i~~~y~~lr~~rd~l~~~~-~g~e~lp~l~~~~~l~~s~-~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p 115 (491)
+--.+-.+.-|.=..+.-+- .+++....-- ....... +-..+|+.++||++||+++..-...|.+.-+...+ -|
T Consensus 17 lgplaiDiyLPalP~ia~~f~~~~~~~qltl--s~fl~g~a~gql~~GplsD~~GRr~~ll~gl~~~~~~s~~~~~--a~ 92 (401)
T PRK11043 17 LGFLATDMYLPAFKAIQADLQTSASAVSASL--SLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSIFALGSLGMLW--VE 92 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH--HH
T ss_conf 9999999998429999999696999999999--9999999999999999998827879999999999999999998--88
Q ss_pred CCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 10014652345555310101344578765557999999999999999999999999986409899899999999899999
Q gi|254780323|r 116 YRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVG 195 (491)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig 195 (491)
+-+ .+ ...+.+ -.+-+.... +.=.+...|.|+.+|+.|.++.+.....++
T Consensus 93 ~~~--------------------~l------i~~R~l---Qg~g~~~~~-v~~~aiirD~~~~~~~~~~~s~~~~~~~i~ 142 (401)
T PRK11043 93 SAA--------------------ML------LVLRFV---QAVGVCSAA-VIWQALVIDRYPAQKAQRIFATIMPLVALS 142 (401)
T ss_pred HHH--------------------HH------HHHHHH---HHCCHHHHH-HHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 999--------------------99------999999---873101467-888899984178999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHH
Q ss_conf 99988999999630123224899999999999999999999984024522332000011234578889999998309679
Q gi|254780323|r 196 LIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYL 275 (491)
Q Consensus 196 ~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL 275 (491)
.++++.+...+.+..+ +.-.-..+...++.+.... . ... |+..+. +..+...+.+.+++||.-
T Consensus 143 p~laP~iGg~l~~~~g---Wr~iF~~l~~~gvll~l~~--~-~~~---~e~~~~--------~~~~~~~~y~~lL~~r~F 205 (401)
T PRK11043 143 PALAPLLGAWLLNHFG---WQAIFATLFAITLLLILPT--L-WLK---PSKKAR--------NNSQDGLTFKQLLKSKTY 205 (401)
T ss_pred HHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHH--H-HCC---CCCCCC--------CCCCHHHHHHHHHHCHHH
T ss_conf 9999889999970478---6999999999999999999--8-658---877888--------754235689999808688
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999-9983299899999999999999999999999978999973167899999999999
Q gi|254780323|r 276 GYLVLLVICYGTAINLVEGPWKEK-VRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILI 354 (491)
Q Consensus 276 ~~l~~~v~~~~~~~tl~e~~~k~~-~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li 354 (491)
..-++...+ ....-+.+...... .++..-++.+ +|.....+.+.-++-.++.+++.+|+|....+...-....+
T Consensus 206 ~~~~l~~~~-~~~~~fayis~spfil~~~G~s~~~----fGl~f~~~~l~~i~Gs~l~~rl~~r~g~~~~l~~g~~l~~l 280 (401)
T PRK11043 206 LGNVLIFAA-CSAAFFAWLTGSPFIMEQMGYSPAV----IGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAV 280 (401)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_conf 999999999-9999999999669999992999999----99999999999999999999999880899999999999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999841
Q gi|254780323|r 355 TGGGFFVFVIF 365 (491)
Q Consensus 355 ~~~~ff~~~~~ 365 (491)
++...+....+
T Consensus 281 ~~~~l~~~~~~ 291 (401)
T PRK11043 281 SVIAIFLAGLL 291 (401)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999987
No 40
>pfam05977 DUF894 Bacterial protein of unknown function (DUF894). This family consists of several bacterial proteins, many of which are annotated as putative transmembrane transport proteins.
Probab=98.51 E-value=0.00022 Score=52.36 Aligned_cols=367 Identities=10% Similarity=0.047 Sum_probs=206.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 38781123279999999999999999999987788651248-54467999999999999999999999963389999999
Q gi|254780323|r 19 CAVKMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMG-AEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYV 97 (491)
Q Consensus 19 ~~i~~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g-~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~ 97 (491)
-|.|...++.++...+. -..+-+.-+....=++.+..| +..+-..-....+|. +++.+.-+.+.+|++|||+.-.
T Consensus 5 apLr~~~FR~lw~a~lv---S~~Gtwmq~VA~~Wlv~~lT~S~~~vglV~~a~~LP~-~ll~l~aGvlADr~dRRr~ll~ 80 (524)
T pfam05977 5 APLRNGTFRWIWIASLV---SNLGWLMQTVAASWLMTDISASPLMVALVQAAATLPI-FLLSIPAGAIADNFDRRKVMLA 80 (524)
T ss_pred CCCCCCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHH
T ss_conf 24577228999999999---9999999999999998765089999999999999889-9999999999982250899999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999984210014652345555310101344578765557999999999999999999999999986409
Q gi|254780323|r 98 VVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITK 177 (491)
Q Consensus 98 ~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~ 177 (491)
+-....+.-...+.+.+. ...+.|....+=....+-+.+..- ..=++..|.-.
T Consensus 81 ~q~~~~~~a~~La~l~~~--------------------------g~~~~~~Ll~l~f~~G~~~A~~~P-A~qA~vp~lVp 133 (524)
T pfam05977 81 GQLLMAIASALLTVLAAL--------------------------GLLSPWLLLAFTFLIGIGTALNDP-AWQASVGDLVP 133 (524)
T ss_pred HHHHHHHHHHHHHHHHHC--------------------------CCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCC
T ss_conf 999999999999999985--------------------------987499999999999999999878-99999998579
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 89989999999989999999988999999630123224899999999999999999999984024522332000011234
Q gi|254780323|r 178 TEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKK 257 (491)
Q Consensus 178 ~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (491)
.+|-+.-.++-+.+-|++-++|+.+...+....+............+.. +..+. ...... .......++
T Consensus 134 r~~L~~AvALns~~~N~aR~iGPAlgG~Lia~~G~~~~F~lnAlSyl~~--i~~L~----~~~~~~-----~~~~~p~e~ 202 (524)
T pfam05977 134 RRDVPAAVALNSVGYNLARSVGPALGGLLVAAFGAATAFAVNALSYFAV--IVAIA----RWKRDV-----PPSPLPREN 202 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHH----HCCCCC-----CCCCCCCCC
T ss_conf 9788989999858998899988899999999772699999999999999--99999----478778-----898888877
Q ss_pred CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 57888999999830967999999999999999999999999999832998999999999999999999999999789999
Q gi|254780323|r 258 LKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILK 337 (491)
Q Consensus 258 ~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~ 337 (491)
....+.+|++.+.+||.++.....+..+.+...-.....-..+++...-. +.-||......|+-.++--+..+++=+
T Consensus 203 ~~~a~~~Glryv~~sp~lr~vl~~~~~~~~~~~~~~aLLPl~Ar~~l~gg---a~~yGlLl~~~G~GAv~GAl~l~~lr~ 279 (524)
T pfam05977 203 LFGALRAGLRYTAMSREIRSVLVRAAAFGLSASAVWALLPLVARDLLGGD---AGFYGILLGAFGAGAVLGALILSRLRR 279 (524)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 68899999999970966999999999999999999999999999983798---147899999999889999998898750
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCH
Q ss_conf 73167899999999999999999998410123466678730020799999999999999987634464668777522697
Q gi|254780323|r 338 SFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDD 417 (491)
Q Consensus 338 r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~ 417 (491)
|++-.......-+... .+...+++ .+-.+......+...+.=..--+-.+.+ +-+.+|+
T Consensus 280 ~~~~~~lv~~~~~~~a---~~~~~la~---------------~~~~~l~~~~l~~~G~awi~~lst~n~~---vQ~~~P~ 338 (524)
T pfam05977 280 RLSSERLVLLASVGFA---LCCLSLAL---------------SPSLWVAAIALLLGGACWITALSTLNVA---VQLASPR 338 (524)
T ss_pred CCCHHHHHHHHHHHHH---HHHHHHHH---------------CCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCH
T ss_conf 1572438999999999---99999996---------------5189999999999989999999999899---9970879
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 67365777678887646677799999999998300
Q gi|254780323|r 418 EFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPM 452 (491)
Q Consensus 418 ~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~ 452 (491)
..|.++-+.+-.+.. .|.+.||++-..+...++.
T Consensus 339 wvRgR~lslY~~v~~-Ggma~Gs~~WG~vA~~~g~ 372 (524)
T pfam05977 339 WVVGRALSVYLTVFF-GGMAAGSWLWGTVAEALGL 372 (524)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCH
T ss_conf 999999999999998-5678889999998730074
No 41
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.38 E-value=0.00045 Score=49.93 Aligned_cols=344 Identities=10% Similarity=0.102 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 327999999999999999999998778865124854--46799999999999-999999999996338999999999999
Q gi|254780323|r 26 AKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGAE--IISFVKLWCVFPSA-ILFTILYMKLSNILETEKLFYVVVSFF 102 (491)
Q Consensus 26 ~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e--~lp~l~~~~~l~~s-~~~~~~y~~l~~~~~~~~l~~~~~~~f 102 (491)
.+.+..+..-.+++..++-..-|+=-- .++..|.+ .+=..- ...+.. ++..+...++.+|++++|.+.......
T Consensus 5 ~R~i~~L~~~~~l~~l~~Gl~~pll~l-~l~~~G~s~~~iGl~~--s~~~~G~llg~~~~~~li~r~G~~r~~~~~~~l~ 81 (381)
T PRK03633 5 TRPVMLLLCGLLLLTLAIAVLNTLVPL-WLAQEHLPTWQVGMVS--SSYFTGNLVGTLLTGYVIKRIGFNRSYYLASLIF 81 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 735999999999999999988899999-9998699878999999--9999999999987799999818899999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 99999999998421001465234555531010134457876555799999999999999999999999998640989989
Q gi|254780323|r 103 VSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEAT 182 (491)
Q Consensus 103 ~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaK 182 (491)
++..+++.+.-. +.................|+.+|.| .||.-++++-.
T Consensus 82 a~~~l~~~l~~~--------------------~~~W~~lR~l~G~~~a~~~v~~EsW------------ln~~a~~~~RG 129 (381)
T PRK03633 82 AAGCVGLGLMVG--------------------FWSWLGWRFLAGIGCAMIWVVVESA------------LMCSGTSRNRG 129 (381)
T ss_pred HHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHHHHHHH------------HHCCCCHHHHH
T ss_conf 999999998812--------------------9999999999999999999999999------------85449733358
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99999998999999998899999963012322489999999999999999999998402452233200001123457888
Q gi|254780323|r 183 RFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSV 262 (491)
Q Consensus 183 Rlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (491)
|..++......+|..+|+.+........ .........+.+.++.... . .. ...| +.+++++.+.
T Consensus 130 rv~~iY~~~~~~g~~~Gp~ll~~~~~~~--~~~f~~~~~l~~~alipi~----~-~~-~~~p--------~~~~~~~~~~ 193 (381)
T PRK03633 130 RLLAAYMMVYYLGTVLGQLLVSKVSTEL--MSVLPWVTGLVLAGILPLL----F-TR-VLNQ--------QAENHDSTSI 193 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCH--HHHHHHHHHHHHHHHHHHH----H-CC-CCCC--------CCCCCCCCCH
T ss_conf 9999999999999999999984167006--7899999999999999999----6-37-8899--------9888777778
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999983096799999999999999999999999999983299899999999999999999999999978999973167
Q gi|254780323|r 263 LESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWF 342 (491)
Q Consensus 263 ~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~ 342 (491)
++-++ ..++|-- ... .+.++....-.....--+..+..-++++-+.+++ ...+-.++.|+..+|+-+|+|-+
T Consensus 194 ~~l~~-~~~ap~~-~~~--~~~~G~~~~~~~sl~Pvy~~~~Gls~~~ia~~~~----~~~~Gg~l~Q~PiG~LSDr~dRr 265 (381)
T PRK03633 194 WPMLK-LRQARLG-VNG--CIISGIVLGSLYGLMPLYLNHQGMSNASIGFWMA----VLVSAGILGQWPMGRLADRFGRL 265 (381)
T ss_pred HHHHH-HCCCHHH-HHH--HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH----HHHHHHHHHHHCHHHHHHHHCCH
T ss_conf 98988-5025899-999--9999999999998889999984998889999999----99999999982459998873729
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHH
Q ss_conf 89999999999999999999841012346667873002079999999999999998763446466877752269767365
Q gi|254780323|r 343 TSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRTK 422 (491)
Q Consensus 343 ~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k 422 (491)
..+.+.-.+..+....... .... .+. +.+ .-..-.+++..+--.+--.+++++.-.
T Consensus 266 ~vl~~~~~~~~~~~~~~~~-----~~~~---------~~~-lf~---------~G~~~~~lY~l~lA~~~d~~~~~~~v~ 321 (381)
T PRK03633 266 LVLRVQVFVVILGSIAMLS-----QAAM---------APA-LFI---------LGAAGFTLYPVAMAWACEKVEHHQLVA 321 (381)
T ss_pred HHHHHHHHHHHHHHHHHHH-----HHHH---------HHH-HHH---------HHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 9999999999999999998-----8999---------999-999---------999985479999999866277888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 7776788876466777999999999983000
Q gi|254780323|r 423 GKAVVDVIGGRMAKSGGAVIQSFIFMLFPMA 453 (491)
Q Consensus 423 ~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~ 453 (491)
+-+.. .+.+-.|-..|-.+.......++.+
T Consensus 322 a~a~~-~~~~~~Gsi~GP~~ag~~M~~~G~~ 351 (381)
T PRK03633 322 MNQAL-LLSYTVGSLLGPSFTAMLMQNYSDN 351 (381)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999-9999819887289999999985812
No 42
>PRK10504 multidrug efflux system protein MdtE; Provisional
Probab=98.36 E-value=0.00048 Score=49.65 Aligned_cols=153 Identities=12% Similarity=0.121 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 1232799999999999999999999877886512-485446799999999999999999999996338999999999999
Q gi|254780323|r 24 SEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPH-MGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFF 102 (491)
Q Consensus 24 ~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~-~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f 102 (491)
..| ..+...+-.|.....-+++-..=-++.-+- .+.+...|+-....+. .-...+..+|+.+|+++||++..-+..|
T Consensus 8 ~rW-~l~iv~l~~Fm~~ld~TivnvALP~i~~~l~~s~~~~~Wv~taY~L~-~a~~~p~~G~laDrfG~rrvf~~gl~~F 85 (471)
T PRK10504 8 TRW-QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLT-VAVMLPASGWLADKVGVRNIFFTAIVLF 85 (471)
T ss_pred CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 379-99999999999999997999999999998698873799999999999-9999999999999948779999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 99999999998421001465234555531010134457876555799999999999999999999999998640989989
Q gi|254780323|r 103 VSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEAT 182 (491)
Q Consensus 103 ~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaK 182 (491)
.+.-++.++- |+-. ..-..=+.-.+=+..++.. =-....+.+.++|-.
T Consensus 86 ~~gSllca~A--~s~~-----------------------------~Li~~R~lQGiG~a~~~P~-~~~ii~~~~p~~~~~ 133 (471)
T PRK10504 86 TLGSLFCALS--GTLN-----------------------------ELLLARVLQGVGGAMMVPV-GRLTVMKIVPREQYM 133 (471)
T ss_pred HHHHHHHHHH--CCHH-----------------------------HHHHHHHHHHCCCCCCCCH-HHHHHHHCCCHHHHH
T ss_conf 9999999971--7789-----------------------------9999999985276210230-341034237768899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999899999999889999996301
Q gi|254780323|r 183 RFYATFGLVGNVGLIFAGGIVKTFSKLT 210 (491)
Q Consensus 183 Rlf~li~~g~~ig~i~gg~~~~~l~~~~ 210 (491)
|..++++..+.+|..+|+.+...+.+..
T Consensus 134 ~a~g~~~~~~~~g~~lGP~lGG~l~~~~ 161 (471)
T PRK10504 134 AAMTFVTLPGQIGPLLGPALGGLLVEYA 161 (471)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHCCCH
T ss_conf 9999999999999885312100101101
No 43
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.36 E-value=0.00049 Score=49.59 Aligned_cols=376 Identities=11% Similarity=0.065 Sum_probs=204.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 78112327999999999999999999998778865124854-46799999999999999999999996338999999999
Q gi|254780323|r 21 VKMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGAE-IISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVV 99 (491)
Q Consensus 21 i~~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e-~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~ 99 (491)
-++..+.+++.+++.-|++...-.+.-++=..+.-+-.-.| .-=++-....+ ...+..+.-..+.+|++||+++-...
T Consensus 7 ~~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl-~~ai~ap~l~~lt~r~~Rr~lLl~~l 85 (394)
T COG2814 7 ARKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYAL-GVALGAPLLALLTGRLERRRLLLGLL 85 (394)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 33363389999999999988478868822288998839988899999999999-99998899999871335389999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHH
Q ss_conf 9999999999999842100146523455553101013445787655579999999999999999999999----999864
Q gi|254780323|r 100 SFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFW----QFANRI 175 (491)
Q Consensus 100 ~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW----~~~n~~ 175 (491)
..|.+.-++.++- | +.|. .+..-+..-+.-. .|| ..+.++
T Consensus 86 ~lFi~~n~l~alA--p-----------------------------~f~~----Ll~aR~~~g~a~G-~f~~i~~~~a~~l 129 (394)
T COG2814 86 ALFIVSNLLSALA--P-----------------------------SFAV----LLLARALAGLAHG-VFWSIAAALAARL 129 (394)
T ss_pred HHHHHHHHHHHHH--C-----------------------------CHHH----HHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_conf 9999998999995--3-----------------------------1999----9999999998889-9999999999987
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 09899899999999899999999889999996301232248999999999999999999999840245223320000112
Q gi|254780323|r 176 TKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVK 255 (491)
Q Consensus 176 f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (491)
-.+++..|--+++..|-+++.++|--+..++.+..+ +...-......++..... +....+ |++. +
T Consensus 130 vpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G---WR~~F~~ia~l~ll~~~~---~~~~lP--~~~~-------~ 194 (394)
T COG2814 130 VPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG---WRATFLAIAVLALLALLL---LWKLLP--PSEI-------S 194 (394)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHH---HHHHCC--CCCC-------C
T ss_conf 595212459999997799999985128999998863---899999999999999999---999699--9667-------7
Q ss_pred CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3457888999999830967999999999999999999999999-999832998999999999999999999999999789
Q gi|254780323|r 256 KKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKE-KVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSN 334 (491)
Q Consensus 256 ~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~-~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ 334 (491)
++.+.+..+-++ .+|+|-+.......++ ....++.-|.|-. ..++...=+ .+..+..-..-|+..++-..+++|
T Consensus 195 ~~~~~~~~~~~~-~l~~p~v~~~l~~t~l-~~~g~F~~ftYi~P~L~~v~g~s---~~~vs~~Ll~~Gv~~~~Gn~~gGr 269 (394)
T COG2814 195 GSLPGPLRTLLR-LLRRPGVLLGLLATFL-FMTGHFALYTYIRPFLESVAGFS---VSAVSLVLLAFGIAGFIGNLLGGR 269 (394)
T ss_pred CCCCCCHHHHHH-HHCCCHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 877764467998-9668458999999999-98162444895799998735998---768899999998999998777764
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
Q ss_conf 99973167899999999999999999998410123466678730020799999999999999987634464668777522
Q gi|254780323|r 335 ILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIP 414 (491)
Q Consensus 335 ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~p 414 (491)
+.+| +.+..+...|....+....+..... .. ... . +...+ =.. .+-|+-+...+.
T Consensus 270 l~dr-~~~~~l~~~~~l~a~~~l~l~~~~~---~~-~~~-----------~-----~~~~~-wg~---a~~~~~~~~~~~ 324 (394)
T COG2814 270 LADR-GPRRALIAALLLLALALLALTFTGA---SP-ALA-----------L-----ALLFL-WGF---AFSPALQGLQTR 324 (394)
T ss_pred HCCC-CCHHHHHHHHHHHHHHHHHHHHHCC---HH-HHH-----------H-----HHHHH-HHH---HHHHHHHHHHHH
T ss_conf 0202-1066999999999999999998311---19-999-----------9-----99999-999---863015678887
Q ss_pred CCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 697---673657776788876466777999999999983000023337999999999999999999997089
Q gi|254780323|r 415 LDD---EFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVNQLSKE 483 (491)
Q Consensus 415 l~~---~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~~~~L~~~ 483 (491)
+.+ |.+..+-+.... ...+|-+.|++++.....-++.. ..+..+.+....+..|.....+..|+
T Consensus 325 ~a~~~p~~~~~a~sl~~a-a~nlgia~GA~lGG~v~~~~g~~----~~~~~~a~l~~~a~~~~~~~~~~~~~ 391 (394)
T COG2814 325 LARLAPDAADLAGSLNVA-AFNLGIALGAALGGLVLDALGYA----ATGWVGAALLLLALLLALLSARKDRR 391 (394)
T ss_pred HCCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCHH----HHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 502477743799999999-99999999999989999810357----78999999999999999998740144
No 44
>TIGR00882 2A0105 oligosaccharide:H+ symporter; InterPro: IPR000576 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) . The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli .; GO: 0005403 hydrogen:sugar symporter activity, 0006810 transport, 0016020 membrane.
Probab=98.31 E-value=9.1e-05 Score=55.39 Aligned_cols=366 Identities=17% Similarity=0.204 Sum_probs=227.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 232799999999999999999999--877886512485446799999999999999999999996338999999999999
Q gi|254780323|r 25 EAKKFIPMTLMMFLVLFNFSTLRP--IKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFF 102 (491)
Q Consensus 25 E~~~~~~~~~~~F~i~~~y~~lr~--~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f 102 (491)
+...+-..+..+|++...|+=.-| ++|..-+++.+.=. ++.+..+ .++.+.|+|+-++||++-||-.-+++...
T Consensus 3 ~f~~f~~ffFlyFfim~~~fpf~piWL~~~~gl~kt~tGi---~fs~~sl-~si~Fqp~~G~~sDkLGLkK~LlW~is~l 78 (397)
T TIGR00882 3 NFWIFGLFFFLYFFIMSAYFPFFPIWLKDVNGLTKTETGI---VFSCISL-FSILFQPLFGLISDKLGLKKHLLWIISLL 78 (397)
T ss_pred CEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH---HHHHHHH-HHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 5120388999999999988533477884225477763577---8888999-99987666400201235506899999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHCCHHH
Q ss_conf 99999999998421001465234555531010134457876555799999999999999999999999--9986409899
Q gi|254780323|r 103 VSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQ--FANRITKTEE 180 (491)
Q Consensus 103 ~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~--~~n~~f~~~q 180 (491)
.+.+.=| .+|-+...+|.+ .|++.+ -|-+=+.+.|-+ =+-|.+.+|-
T Consensus 79 LvlfaPF--fiyVf~PLL~~N----------------------i~~G~l-------~Gg~y~G~~f~AG~Ga~eayiEkv 127 (397)
T TIGR00882 79 LVLFAPF--FIYVFAPLLQSN----------------------ILVGAL-------VGGLYLGFVFSAGAGAIEAYIEKV 127 (397)
T ss_pred HHHHHHH--HHHHHHHHHHHH----------------------HHHHHH-------HHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 9986159--989867799989----------------------999999-------869998778732573468889787
Q ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 8999---9999989999999988999999630123224899999999999999999999984024522332000011234
Q gi|254780323|r 181 ATRF---YATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKK 257 (491)
Q Consensus 181 aKRl---f~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (491)
+||. ||--=.-|.+|-.++...+.-+=+.......+..+....+..++.. ..+ .+.++..+..+.---++
T Consensus 128 sR~~~FEYG~aR~fGc~GwAlcA~~~GIlF~i~p~~~FWl~S~~a~~l~~ll~-----~~k--~~~~~~A~V~~a~gAn~ 200 (397)
T TIGR00882 128 SRNSNFEYGKARMFGCVGWALCASIAGILFSIDPSIVFWLGSGFALILMLLLM-----VAK--PKSSDSAEVANALGANA 200 (397)
T ss_pred HHCCCCCCCEEEEEEECHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHH-----HHC--CCCCCHHHHHHHHHCCC
T ss_conf 52479840017888721378776530300300664145788999999999997-----616--99872689999873380
Q ss_pred CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 57888999999830967999999999999999999999-99999983299899999999999999999999999978999
Q gi|254780323|r 258 LKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGP-WKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNIL 336 (491)
Q Consensus 258 ~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~-~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll 336 (491)
...+ .+..-.++|.|-+..+.++++.-...++..|-| |..--+.-++++++=|+.+|...+.-.++.=++++..|.++
T Consensus 201 ~~~~-~~~~~~lFr~r~~W~f~lyvvGv~~~YdvFDQQlFa~Ff~~fF~~~~~Gtr~fGy~tt~ge~lnA~iMf~~P~ii 279 (397)
T TIGR00882 201 SAIS-LKDALELFRQRRLWVFVLYVVGVACVYDVFDQQLFAVFFKGFFATPQQGTRVFGYVTTAGELLNALIMFCAPLII 279 (397)
T ss_pred CCCC-HHHHHHHHCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHH
T ss_conf 0016-789999717998657888666100023101210037786554057677627665301288999999998703776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
Q ss_conf 97316789999999999999999999841012346667873002079999999999999998763446466877752269
Q gi|254780323|r 337 KSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLD 416 (491)
Q Consensus 337 ~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~ 416 (491)
.|.|-++++++--.++.+=. .+.++......-.....+-. .|+=. .+--+.||.. =+
T Consensus 280 NRiG~KNaLLiag~IM~~RI---~gssf~~~~~ev~~lK~LH~----~EvPf-----llvg~FKYi~-----------~~ 336 (397)
T TIGR00882 280 NRIGAKNALLIAGLIMAVRI---LGSSFATTAVEVVILKMLHA----LEVPF-----LLVGAFKYIT-----------SV 336 (397)
T ss_pred HCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH----HHHHH-----HHHHHHHHEE-----------CC
T ss_conf 16671589999999999999---98887766999999999888----76268-----9864554111-----------11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHH
Q ss_conf 7673657776788876466777999999999-98300002333
Q gi|254780323|r 417 DEFRTKGKAVVDVIGGRMAKSGGAVIQSFIF-MLFPMATFSSI 458 (491)
Q Consensus 417 ~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~-~~~~~~~~~~~ 458 (491)
-|.|.-+.-.. +|-++.|..+.++..... ..++..+..+.
T Consensus 337 F~~rLSaTiyL--iGF~~~kqla~i~LS~~~G~lyd~~Gfq~~ 377 (397)
T TIGR00882 337 FDKRLSATIYL--IGFQFAKQLAAILLSTFAGNLYDRIGFQTA 377 (397)
T ss_pred CCCCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 15522567889--999998888899999877767630244799
No 45
>KOG1330 consensus
Probab=98.31 E-value=9.7e-05 Score=55.17 Aligned_cols=361 Identities=11% Similarity=0.048 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 12327999999999999999999998778865124-----85---44679999999999999999999999633899999
Q gi|254780323|r 24 SEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHM-----GA---EIISFVKLWCVFPSAILFTILYMKLSNILETEKLF 95 (491)
Q Consensus 24 ~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~-----g~---e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~ 95 (491)
...++....-..++++-.-.+.=|-.-+...-+.+ |. -.+...+. + .=.++.|+.+++.+|++|..++
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~---v-~~~i~sPl~gyLadryNR~~v~ 101 (493)
T KOG1330 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFI---V-VFMIASPLFGYLADRYNRKRVI 101 (493)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHH---H-HHHHHHHHHHHHHHHCCCCEEE
T ss_conf 35545137899999999998743412001567788760889020560148999---9-9999998899887642741587
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999842100146523455553101013445787655579999999999999999999999999864
Q gi|254780323|r 96 YVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRI 175 (491)
Q Consensus 96 ~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~ 175 (491)
-.-..+....-+.-++.- -.|.+.+.|-..+.. | .++ ..+ ==++++|.
T Consensus 102 ~vG~~iW~~Av~~~~fs~-----------------------~Fwq~~l~R~~vGiG-----e--As~-~~i-a~s~IaD~ 149 (493)
T KOG1330 102 AVGIFIWTLAVFASGFSN-----------------------HFWQVLLCRGFVGIG-----E--ASY-SPI-APSLIADS 149 (493)
T ss_pred EEHHHHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHCCC-----H--HHH-CCC-CHHHHHHC
T ss_conf 558899999999988899-----------------------999999999884240-----5--441-102-02676640
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 09899899999999899999999889999996301232--2489999999999999999999998402452233200001
Q gi|254780323|r 176 TKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNEL--MIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGS 253 (491)
Q Consensus 176 f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 253 (491)
|+.+|-.|-++++..+..+|..+|.......+.....- ....... .++.+..+... ...+|++....+..
T Consensus 150 f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~av----l~vi~~~L~~~----f~~eP~rga~~~~~ 221 (493)
T KOG1330 150 FPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAV----LGVIVGLLVFL----FVREPERGARDEVD 221 (493)
T ss_pred CCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEEEEHH----HHHHHHHHHHH----HCCCCCCCCCCCCC
T ss_conf 76025667788754210135641477401541576636898874008----99999999875----03574223210123
Q ss_pred CC---CCCCCCHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 12---345788899999983096-79999999999999999999--9999999983299899999999999999999999
Q gi|254780323|r 254 VK---KKLKLSVLESLRMALNSK-YLGYLVLLVICYGTAINLVE--GPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIV 327 (491)
Q Consensus 254 ~~---~~~~~~~~~~~k~i~~s~-yL~~l~~~v~~~~~~~tl~e--~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii 327 (491)
.+ .++..+.++.+|...+.| |......+.....++.++-+ -.+.....+....+++.+..+|......|++..+
T Consensus 222 ~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl 301 (493)
T KOG1330 222 GENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVL 301 (493)
T ss_pred CCCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHE
T ss_conf 67767788522678899987067013005899999883064323456678889987077644222555689860524402
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99-99789999731678999999999999999999984101234666787300207999999999999999876344646
Q gi|254780323|r 328 FM-ILGSNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDS 406 (491)
Q Consensus 328 ~q-ll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p 406 (491)
.= .++.++.+.+--..++.+-+++...+......+....+...... .......+.+|.. .-..-.-+
T Consensus 302 ~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s-----~~~~~il~~~g~~-------~~~~~~a~ 369 (493)
T KOG1330 302 FGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSS-----MIFGLILFLVGET-------ISWFNWAT 369 (493)
T ss_pred EHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHH-------HHHCCCCC
T ss_conf 12788888887426643054778987611458999999998611488-----9999999999999-------98616556
Q ss_pred HHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6877752269767365777678887646677799
Q gi|254780323|r 407 TKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGA 440 (491)
Q Consensus 407 ~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs 440 (491)
.-.++-.-++++.|.-++++--.+-.-+|+..++
T Consensus 370 n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p 403 (493)
T KOG1330 370 NNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASP 403 (493)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 6431368627553208999999999983248886
No 46
>KOG2533 consensus
Probab=98.23 E-value=0.00089 Score=47.55 Aligned_cols=226 Identities=11% Similarity=0.010 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999963389999999999999999999999842100146523455553101013445787655579999999999
Q gi|254780323|r 78 FTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAE 157 (491)
Q Consensus 78 ~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e 157 (491)
.....+.+.+|++.++.......... +++++-.- ..+.|.+...-+...
T Consensus 97 ~~~p~~~L~~r~~ls~~l~~~~~~w~----~~~~~~~~---------------------------~~s~~~~ialr~llG 145 (495)
T KOG2533 97 GQFPSGLLGDRFPLSKGLSVSGILWG----LFGFLTAA---------------------------VHSFPGLIALRFLLG 145 (495)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHH----HHHHHHHH---------------------------HHCHHHHHHHHHHHH
T ss_conf 98569999874787899999999999----99999998---------------------------835689999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999986409899899999999899999999889999996301232248999999999999999999999
Q gi|254780323|r 158 LWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMN 237 (491)
Q Consensus 158 ~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 237 (491)
++-+.... .+=.++..-|+.+|-.+-.|+..+.+++|.++||.+...+.+..+.....---..++..+...........
T Consensus 146 l~es~~wP-~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533 146 LFESGGWP-GVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HHHHCCCH-HHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEE
T ss_conf 98714616-99999987538145547889999836245688999998888743677766610479999999999887436
Q ss_pred HHCCCCCCC---CCCCC----------CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 840245223---32000----------01123457888999999830967999999999999999999999999999832
Q gi|254780323|r 238 LYVLTDPQQ---YSPKR----------GSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLY 304 (491)
Q Consensus 238 ~~~~~~~~~---~~~~~----------~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~ 304 (491)
...+.+|++ .+.++ ..++...+.--+.+++..+++|.+...++.-++...+.+...+..-.++++..
T Consensus 225 ~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~ 304 (495)
T KOG2533 225 FFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNG 304 (495)
T ss_pred EEECCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
T ss_conf 88169810066676366542245665345666544447899999990637799999999998637307889999987379
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q ss_conf 9989999999999999999999999-997899
Q gi|254780323|r 305 PTQNSYAQFMGQFIQWTGIVTIVFM-ILGSNI 335 (491)
Q Consensus 305 ~~~~~~~af~g~~~~~v~i~tii~q-ll~~~l 335 (491)
.-++..+..++.-..+.|+++.+.- ++..++
T Consensus 305 ~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533 305 GYSELQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 85755500006389998999999999999987
No 47
>TIGR00900 2A0121 H+ Antiporter protein; InterPro: IPR004751 Drug antiporters which use the proton motive force for the active efflux of the drug .; GO: 0016021 integral to membrane.
Probab=98.21 E-value=0.00098 Score=47.22 Aligned_cols=340 Identities=13% Similarity=0.091 Sum_probs=185.8
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999--9999987788651248544679999999999999999999999633899999999999999999999998
Q gi|254780323|r 36 MFLVLFNF--STLRPIKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLL 113 (491)
Q Consensus 36 ~F~i~~~y--~~lr~~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l 113 (491)
.--+.+.+ ++++-..|+..++ -.-+...+|. +++.++-+-..||++|||+.-..=..-++..+..-++.
T Consensus 17 i~~vAl~llA~vl~~~g~~~~l~--------la~~~~~~p~-~~~~piaG~~~DR~~Rk~~~~~~Dlirav~~~~l~~~~ 87 (387)
T TIGR00900 17 ITQVALPLLAYVLAGTGSASVLS--------LAALAGLLPY-VVLSPIAGVLVDRYDRKKVMIGADLIRAVLVAVLPFVA 87 (387)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHH--------HHHHHHHHHH-HHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999985047666899--------9999988764-14303300231157711667888899999999999999
Q ss_pred HHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH--HHHHHHHHHHHH
Q ss_conf 421001465234555531010134457876555799999999999999999999999998640989--989999999989
Q gi|254780323|r 114 YPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTE--EATRFYATFGLV 191 (491)
Q Consensus 114 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~--qaKRlf~li~~g 191 (491)
.. .-+..++.|.-..--.--++.+.+-.. ..=+..=|+..+| |=.|--+.....
T Consensus 88 ~~-----------------------~Gvd~l~~~~~~v~~~i~~~~~~Ff~p-a~~a~~P~~vp~e~W~l~~Ans~~~~~ 143 (387)
T TIGR00900 88 LL-----------------------GGVDVLEIWMVYVVAFILAIAQAFFTP-AYQAMLPDLVPEEKWQLTRANSLSQLV 143 (387)
T ss_pred HH-----------------------CCCHHHHHHHHHHHHHHHHHHHHHCCH-HHHCCCHHHCCHHHHHHHHHHHHHHHH
T ss_conf 84-----------------------650123499999999999977642130-222002000211234799998799999
Q ss_pred HHHHH-HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--C-CCCCCCCCCCCHHHHHH
Q ss_conf 99999-99889999996301232248999999999999999999999840245223320--0-00112345788899999
Q gi|254780323|r 192 GNVGL-IFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSP--K-RGSVKKKLKLSVLESLR 267 (491)
Q Consensus 192 ~~ig~-i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~k 267 (491)
.++.. ++|+.+...+....+............+.+...... -+.+.+++++.. . ++.+-++.--+++||++
T Consensus 144 ~~~~~r~vgPgigg~~~~~~g~~~~~~~~a~~F~~s~~l~~~-----~r~p~~~~~~~~~~~~rkts~~~~~rd~~eG~~ 218 (387)
T TIGR00900 144 RSLFYRIVGPGIGGLLYATLGIKWAILVDAVGFLISALLIVS-----VRIPEKAASEIEPLSERKTSLKAVLRDILEGLK 218 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 999887567999999999999999999999999999999865-----057666788888875256589999999999999
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHH
Q ss_conf 98309679999999999999999999-9999999983299899999999999999999999999978----999973167
Q gi|254780323|r 268 MALNSKYLGYLVLLVICYGTAINLVE-GPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGS----NILKSFRWF 342 (491)
Q Consensus 268 ~i~~s~yL~~l~~~v~~~~~~~tl~e-~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~----~ll~r~G~~ 342 (491)
.+.++|.|+.+..+..+++.+..-.. ..+=...++...++... +|.....-+.-.++-.+..+ +..+|.=-+
T Consensus 219 ~~~~~~~L~~l~~~~~~~~~~~~p~~~~l~P~~~~~~~~~~~~~---~G~~~~af~~G~l~G~L~~~~~L~~~~~~~~~r 295 (387)
T TIGR00900 219 FVLKNKVLRTLLLLALLFNLVFAPIIVVLFPYVTSKYLNRTSVH---VGWVLAAFGLGALLGALLLGSILRRLLGRYFKR 295 (387)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 99707689999999999999851278876303214440786225---679999999999999999999998876113434
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHH
Q ss_conf 89999999999999999999841012346667873002079999999999999998763446466877752269767365
Q gi|254780323|r 343 TSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRTK 422 (491)
Q Consensus 343 ~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k 422 (491)
..+...++..+ +...+...+.++... +.++-.......-...--.+=|....+-...++|.|.+
T Consensus 296 ~~l~~~a~~~~--g~~~~~~~~~~~~~~--------------~~~~~l~~~~~~G~~~~~~~~~~~~~~q~~v~~~~~GR 359 (387)
T TIGR00900 296 IALITGAVLVI--GLAILVVGLLPPRNS--------------GFLLLLVLAFAIGVGVGLINVPIGTLLQRSVPAELLGR 359 (387)
T ss_pred HHHHHHHHHHH--HHHHHHHHHCCCCCH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999--999898762389614--------------89999999998642034558778878887500785158
Q ss_pred HHHHHHHHHH
Q ss_conf 7776788876
Q gi|254780323|r 423 GKAVVDVIGG 432 (491)
Q Consensus 423 ~K~~iD~~~~ 432 (491)
.-+..|.+..
T Consensus 360 V~~~~~~~~~ 369 (387)
T TIGR00900 360 VFGLQFSLSS 369 (387)
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 48
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.14 E-value=0.0013 Score=46.23 Aligned_cols=50 Identities=4% Similarity=-0.041 Sum_probs=26.7
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999983299899999999999999999999999978999973167899999
Q gi|254780323|r 298 EKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIIT 348 (491)
Q Consensus 298 ~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~ 348 (491)
....|.||++ -|..=.|..+..-.+...+.-++.+++.++.|...+....
T Consensus 344 ~~~~ElfPt~-vR~tg~G~~~~~grigg~~~P~i~~~L~~~~G~~~a~~~~ 393 (426)
T PRK12307 344 KFLYDYFPLE-VRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFI 393 (426)
T ss_pred HHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 9999849898-9999999999999999999999999999887945899999
No 49
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.09 E-value=0.0017 Score=45.44 Aligned_cols=263 Identities=12% Similarity=0.049 Sum_probs=129.8
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 987788651248544679999999999999999----9999996338999999999999999999999984210014652
Q gi|254780323|r 48 PIKDSLVVPHMGAEIISFVKLWCVFPSAILFTI----LYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPS 123 (491)
Q Consensus 48 ~~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~----~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~ 123 (491)
+.=..+|-...++ ...-+..+.++.++.+.-| +++++.||++|++.+.+++..+.+.=.+.++ .|..+
T Consensus 46 ~~i~~~FFp~~~~-~~~ll~t~~~fa~gf~~RPlG~iifG~igDr~GRk~~l~~si~lm~i~T~lig~--lPty~----- 117 (432)
T PRK10406 46 LYFAHIFFPSGNT-TTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIAC--LPGYE----- 117 (432)
T ss_pred HHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH--CCCHH-----
T ss_conf 9999960899993-699999999999999988669999999887301099999999999999999994--88588-----
Q ss_pred HHHHHHHH----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 34555531----01013445787655579999999999999999999999999864098998999999998999999998
Q gi|254780323|r 124 PESIRALA----SSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFA 199 (491)
Q Consensus 124 ~~~~~~~~----~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~g 199 (491)
.+..+. .....+++ +.+-.||... +.++.|.-.+++-.++-+....|..+|.+++
T Consensus 118 --~IGi~ApilLvl~RllQG-~~~GGE~~ga------------------~~~l~E~ap~~rRG~~~s~~~~g~~~G~lla 176 (432)
T PRK10406 118 --TIGTWAPALLLLARLFQG-LSVGGEYGTS------------------ATYMSEVAVEGRKGFYASFQYVTLIGGQLLA 176 (432)
T ss_pred --HHHHHHHHHHHHHHHHHH-HHHCCCHHHH------------------HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHH
T ss_conf --878899999999999999-8615758999------------------9999984777771355309999999999999
Q ss_pred HHHHHHHHHHCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHH
Q ss_conf 899999963012322489999-9999999999999999984024522332000011234578889999998309679999
Q gi|254780323|r 200 GGIVKTFSKLTNELMIYYSML-TLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYL 278 (491)
Q Consensus 200 g~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l 278 (491)
......+.+..++..+.-..+ ...+.+.....+..+++++....++ +++++++++.. ++.++++|....+
T Consensus 177 ~~v~~~l~~~l~~~~~~~wGWRipFlig~i~~li~l~lR~~l~Es~~-----~~~~~~~~~~~----~~~l~~~~~~~l~ 247 (432)
T PRK10406 177 LLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQ-----QETRALKEAGS----LKGLWRNRRAFIM 247 (432)
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH-----HHHHCCCCCCC----HHHHHHHHHHHHH
T ss_conf 99999997406822222510999999999999999999972777826-----78630455553----7999873599999
Q ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999----99983299899999999999999999999999978999973167899999999999
Q gi|254780323|r 279 VLLVICYGTAINLVEGPWKE----KVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILI 354 (491)
Q Consensus 279 ~~~v~~~~~~~tl~e~~~k~----~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li 354 (491)
+... ....+...|.+.. ...+...-+.... .........+..+...+.+++-+|+|-+....+.-+...+
T Consensus 248 ~~~~---~~~~~~~~y~~~~~~~t~l~~~~~~~~~~~---~~~~~~~~~~~~i~~~l~G~LsDriGRr~~~~~~~~~~~~ 321 (432)
T PRK10406 248 VLGF---TAAGSLCFYTFTTYMQKYLVNTAGMHANVA---SGIMTAALFVFMLIQPLFGALSDKIGRRTSMLCFGSLATI 321 (432)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHHCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 9999---999999999999999999987559988999---9999999999999999999999884732999999999999
No 50
>TIGR00893 2A0114 d-galactonate transporter; InterPro: IPR004744 D-galactonate transporters and other proteins that belong to the phthalate permease family are members of this group.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=98.09 E-value=0.0017 Score=45.40 Aligned_cols=347 Identities=14% Similarity=0.068 Sum_probs=207.9
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 877886512485446799999999999999999999996338-9999999999999999999999842100146523455
Q gi|254780323|r 49 IKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKLSNILE-TEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESI 127 (491)
Q Consensus 49 ~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~-~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~ 127 (491)
+||.+-++. +...+...... ..-++....-+++.+|++ -|+..-.....=+.+-.+-++.- ..+.
T Consensus 21 l~~DLg~~~---~~~g~~~saF~-~gY~~~~~p~g~~Ldr~Gh~~~~~~~~~v~Wg~f~~~~af~~----------~Fs~ 86 (427)
T TIGR00893 21 LQEDLGLSA---AQYGYVFSAFS-IGYVLGQFPGGLLLDRIGHARKTLAVAIVLWGVFTLLQAFAG----------GFST 86 (427)
T ss_pred HHHHCCCCH---HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHH
T ss_conf 687608877---68889999999-999999666898875211589999999999999999997556----------5446
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55310101344578765557999999999999999-----9999999999864098998999999998999999998899
Q gi|254780323|r 128 RALASSWPYLKWFIYLAGKWSFALFYVFAELWGAV-----MINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGI 202 (491)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~-----vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~ 202 (491)
.. ....||+.--+.|.- ... -+-=..++=|.++|-.+--+....+..+|+++++-+
T Consensus 87 ~~------------------~~~~l~~lR~l~G~aGLEa~~~P-g~~~~~~~WFP~~eR~~~~s~f~~~~~lg~~~~~Pl 147 (427)
T TIGR00893 87 VT------------------AYVSLYILRVLLGAAGLEAPLFP-GIIKIVASWFPAKERATAVSIFNSAQYLGGIIGGPL 147 (427)
T ss_pred HH------------------HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76------------------89999999999856567777513-689987300465575779999999999999999899
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------C-CCCCCCCCCCCHHHHH
Q ss_conf 99996301232248999999999999999999999840245223320---------------0-0011234578889999
Q gi|254780323|r 203 VKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSP---------------K-RGSVKKKLKLSVLESL 266 (491)
Q Consensus 203 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---------------~-~~~~~~~~~~~~~~~~ 266 (491)
+.+.....++.++..-...++..+..+.............+|++++. + +.+++|++....+..+
T Consensus 148 ~~~i~~~~~~~g~~gW~~~F~~~G~~~~~~gv~~~~~~~d~p~~a~~~~~e~~~~~~~~~~~~~~~~~~k~~~~~k~~~~ 227 (427)
T TIGR00893 148 VGWILVHFSSMGMKGWQWVFIIEGILGIILGVLWLKFIKDKPQKAKWLTEEEKYIVVGGLLAEQDDSKGKGPSEPKKYQI 227 (427)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
T ss_conf 99999874466520138999999799999999999860797547664548999876403420000334567877608999
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH----HH
Q ss_conf 998309679999999999999999999999999998329989999999999999999999999-9978999973----16
Q gi|254780323|r 267 RMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFM-ILGSNILKSF----RW 341 (491)
Q Consensus 267 k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~q-ll~~~ll~r~----G~ 341 (491)
+..+++|-...+++--.+.+.+..++-.-+=.++++..--+...+.+++..-.+++.+.+++- .++..+.||. .-
T Consensus 228 ~~~L~~r~~~~~~~~~~~~~~~~~~f~~W~P~yl~~~~g~~~l~~g~~~~~P~~~g~~G~~L~g~~SD~~~~r~~~fW~~ 307 (427)
T TIGR00893 228 KELLKDRRVWGLALGQFLVNILLYFFLTWFPTYLKQERGLSILEAGFLASLPGIVGFVGMVLGGILSDLLLRRGARFWKS 307 (427)
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 99981559989999999999988999999999986531458999999999999999999999998678876235413566
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHH-HHH--HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCH
Q ss_conf 7899999999999-999999998-410--123466678730020799999999999999987634464668777522697
Q gi|254780323|r 342 FTSAIITPLMILI-TGGGFFVFV-IFE--DALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDD 417 (491)
Q Consensus 342 ~~~l~i~Pi~~li-~~~~ff~~~-~~~--~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~ 417 (491)
...+..+|+++.+ .+.+.+... +.+ +....... ..+.--.++.+.-+.-=+..-..|+
T Consensus 308 l~~a~~~~~~~~~~~s~~~~~~~~~~~Gm~~~~~~~~------------------~~l~~fg~~~l~~~~w~~~s~~~~~ 369 (427)
T TIGR00893 308 LVFARKTAIIAGLVLSLLMFATNSLVNGMPPWAALAL------------------VALAFFGAGLLGAILWAVISDVLPG 369 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 7899999999999999999986103101799999999------------------9999999999887665540310575
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67365777678887646677799999999
Q gi|254780323|r 418 EFRTKGKAVVDVIGGRMAKSGGAVIQSFI 446 (491)
Q Consensus 418 ~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l 446 (491)
+...-+-+.+..++|..|-..+-.+...+
T Consensus 370 ~~~g~~~G~i~~~GY~~~~i~~P~~~G~~ 398 (427)
T TIGR00893 370 NIAGLTGGLINSLGYNLGGIVGPIVIGYI 398 (427)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 12456889999999989999999999776
No 51
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=97.99 E-value=0.0025 Score=44.08 Aligned_cols=49 Identities=10% Similarity=0.039 Sum_probs=26.4
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999983299899999999999999999999999978999973167899
Q gi|254780323|r 296 WKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSA 345 (491)
Q Consensus 296 ~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l 345 (491)
......|.+| ++.+..-+|..+...++-..+--.+.+.+++..|-....
T Consensus 329 ~~~~~~e~~p-~~~rgt~~G~~~~~g~lG~~igP~~~G~ll~~~g~~~~~ 377 (406)
T PRK11551 329 LYALAPLFYP-TQMRGTGVGAAVAVGRLGSMAGPLAAGQLLALGRSTAGV 377 (406)
T ss_pred HHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 9999998785-989999999999999999999999999999811889999
No 52
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.97 E-value=0.0027 Score=43.81 Aligned_cols=303 Identities=10% Similarity=0.058 Sum_probs=141.6
Q ss_pred CCCHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHC
Q ss_conf 87811232799999999------99999999999987788651248544679999999999999999----999999633
Q gi|254780323|r 20 AVKMSEAKKFIPMTLMM------FLVLFNFSTLRPIKDSLVVPHMGAEIISFVKLWCVFPSAILFTI----LYMKLSNIL 89 (491)
Q Consensus 20 ~i~~~E~~~~~~~~~~~------F~i~~~y~~lr~~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~----~y~~l~~~~ 89 (491)
-|.+++.||.+..+..- =+.+++| +-+.=...|-...++ ...-+..+.++.++++.-| +++.+.+|+
T Consensus 8 ~~d~~~~rk~i~a~~~G~~lEwyDF~iYg~--~A~~i~~~FFP~~~~-~~~ll~tfa~favgf~~RPlGgivfG~lgDr~ 84 (490)
T PRK10642 8 IIDDGKLRKAITAASLGNAMEWFDFGVYGF--VAYALGKVFFPGADP-SVQMIAALATFSVPFLIRPLGGLFFGMLGDKY 84 (490)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 348899999999999868999999999999--999999861999994-69999999999999998857999999999852
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999842100146523455553----10101344578765557999999999999999999
Q gi|254780323|r 90 ETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRAL----ASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMIN 165 (491)
Q Consensus 90 ~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis 165 (491)
+|++.+.+++..+.+.-.+.++ .|..+ .+..+ -.....+++ +....+|..+
T Consensus 85 GRk~~L~~ti~lM~~~T~ligl--lPtY~-------~IGi~ApilLvllRllQG-~s~GGE~~ga--------------- 139 (490)
T PRK10642 85 GRQKILAITIVIMSISTFCIGL--IPSYA-------TIGIWAPILLLLCKMAQG-FSVGGEYTGA--------------- 139 (490)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH--CCCHH-------HHHHHHHHHHHHHHHHHH-HHHCCCHHHH---------------
T ss_conf 1099999999999999999987--47799-------889999999999999988-8631427689---------------
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9999999864098998999999998999999998899999963012322489999-999999999999999998402452
Q gi|254780323|r 166 LMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSML-TLILSSILLMAVYRWMNLYVLTDP 244 (491)
Q Consensus 166 ~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~ 244 (491)
.+++.|.-..+.-.++-+.+..|..+|.++|......+....++..+.-..+ ...+.+..+..+..+++++....|
T Consensus 140 ---~~~l~E~aP~~~RG~~~s~~~~g~~~G~llaa~~~~~l~~~l~~~~~~~wGWRIPFlig~~l~ligl~iR~~l~ESP 216 (490)
T PRK10642 140 ---SIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETP 216 (490)
T ss_pred ---HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf ---99999858976502012389888999999999999999986698776265529999999999999999998089987
Q ss_pred CCCCCCCCCC---CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHCCCHHHHHHHHHHH
Q ss_conf 2332000011---2345788899999983096799999999999999999999999----99998329989999999999
Q gi|254780323|r 245 QQYSPKRGSV---KKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWK----EKVRQLYPTQNSYAQFMGQF 317 (491)
Q Consensus 245 ~~~~~~~~~~---~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k----~~~~~~~~~~~~~~af~g~~ 317 (491)
...+..++.+ ++..+......++.++++.. +.+...+.+ ....+..+|... .+..+...-+.+. +.. .
T Consensus 217 ~F~~~~e~~~~~~~~~~~~~~~~pl~e~~~~~~-r~ll~~~gl-~~~~~~~~Y~~~~y~ptyl~~~l~~s~~~-~~~--~ 291 (490)
T PRK10642 217 AFQQHVDKLEQGDREGLQDGPKVSFKEIATKHW-RSLLTCIGL-VIATNVTYYMLLTYMPSYLSHNLHYSEDH-GVL--I 291 (490)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH-HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCHHH-HHH--H
T ss_conf 689888776421000013465444999999847-999999999-99999999999999999999802998778-999--9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999789999731678999999999999999
Q gi|254780323|r 318 IQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGG 358 (491)
Q Consensus 318 ~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ 358 (491)
.....+..++...+.+++-+|+|-+..+.+.-+..++.+..
T Consensus 292 ~~~~~v~~~~~~pl~G~LSDriGRr~vli~g~i~~~vl~~P 332 (490)
T PRK10642 292 IIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIP 332 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998826489999999999999999
No 53
>KOG2615 consensus
Probab=97.95 E-value=0.0023 Score=44.26 Aligned_cols=347 Identities=12% Similarity=0.097 Sum_probs=159.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999998778865124854467999999999--9999999999999633899999999999999999999998
Q gi|254780323|r 36 MFLVLFNFSTLRPIKDSLVVPHMGAEIISFVKLWCVFP--SAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLL 113 (491)
Q Consensus 36 ~F~i~~~y~~lr~~rd~l~~~~~g~e~lp~l~~~~~l~--~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l 113 (491)
-++-.+.|..+|+.-.+...+. ++ +--|.=...... +-++..+..+.++++++|+-.....+..-++.+.+++.--
T Consensus 42 ~~L~~~~~~~V~~F~~a~~~~~-~~-~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~ 119 (451)
T KOG2615 42 SSLYPFVVFMVRDFNIAIGEPD-GA-SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR 119 (451)
T ss_pred CCHHHHHHHHHHHHHHHHCCCC-CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4025778885478887017865-55-300122476589999997665542256650761899999999999999999888
Q ss_pred HHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 42100146523455553101013445787655579999999999999999999999999864098998999999998999
Q gi|254780323|r 114 YPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGN 193 (491)
Q Consensus 114 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ 193 (491)
. +..+ +.......+| =|+ +|+ =-+++.|+.++++-.+-.+.++..-+
T Consensus 120 ~----------------------F~af--v~aR~l~Gi~------kgn--l~v-~rAiisdV~sek~r~l~ms~v~~a~~ 166 (451)
T KOG2615 120 N----------------------FAAF--VLARFLGGIF------KGN--LSV-IRAIISDVVSEKYRPLGMSLVGTAFG 166 (451)
T ss_pred H----------------------HHHH--HHHHHHHHHC------CCC--HHH-HHHHHHHHCCHHHCCCEEEEEEHHHH
T ss_conf 7----------------------9999--9999863550------675--699-99999862585431531244104543
Q ss_pred HHHHHHHHHHHHHHH---HCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCC----CCCCCCCCCCCCCCHHH-
Q ss_conf 999998899999963---012322489999-999999999999999998402452233----20000112345788899-
Q gi|254780323|r 194 VGLIFAGGIVKTFSK---LTNELMIYYSML-TLILSSILLMAVYRWMNLYVLTDPQQY----SPKRGSVKKKLKLSVLE- 264 (491)
Q Consensus 194 ig~i~gg~~~~~l~~---~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~- 264 (491)
+|.++|+.+..+++. ..+..+..+-.. ..+++........+.. .+..+.++++ +..+..+..++..++..
T Consensus 167 lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~l-pETL~~rk~~~~~~~~~~~~~~~~~~~~~~~~ 245 (451)
T KOG2615 167 LGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFL-PETLPLRKRNDEHSTLQEAADDRLALLKFARI 245 (451)
T ss_pred CCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCHHHCCCCCCHHHHHHHHHHHCCHHHH
T ss_conf 03110104566787647652468067899999999998899888857-75564043124435554442126662463665
Q ss_pred HHHHHHCCHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q ss_conf 9999830967999-------999999999999999999999999832998999999999999999999999999-78999
Q gi|254780323|r 265 SLRMALNSKYLGY-------LVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMIL-GSNIL 336 (491)
Q Consensus 265 ~~k~i~~s~yL~~-------l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll-~~~ll 336 (491)
.--...|+|-+.. +.+-.++|.......|+.-...-.+.+.-+.+. -|.....+|....+.|.. .+++=
T Consensus 246 ~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~---~G~vl~~tGl~m~~~ql~~~~~l~ 322 (451)
T KOG2615 246 FKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQ---QGKVLSTTGLLMLVIQLALVPILP 322 (451)
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH---HEEEEEHHHHHHHHHHHHCCCCCC
T ss_conf 55565228531006999999999999999999999753787604766877235---214520000899987874012445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
Q ss_conf 97316789999999999999999999841012346667873002079999999999999998763446466877752269
Q gi|254780323|r 337 KSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLD 416 (491)
Q Consensus 337 ~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~ 416 (491)
+..|-..+.+..++.+++..+.+.+.+ ++...++.+...+.+.- +.-.|+--. -+.
T Consensus 323 ~~~~~~~a~l~~~l~~~vP~~llls~~-----------------~~~~~l~~~s~l~sf~~----A~~vt~Lt~---Lv~ 378 (451)
T KOG2615 323 RYKGNIKAVLLFSLLLIVPAFLLLSLA-----------------RTPVVLYLGSTLKSFST----ASVVTCLTS---LVH 378 (451)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCC-----------------CCCHHHHHHHHHHHHHH----HHHHHHHHH---HHH
T ss_conf 334640567999999999999998046-----------------65301228999999998----876688999---997
Q ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Q ss_conf 767365777678887646---67779999999
Q gi|254780323|r 417 DEFRTKGKAVVDVIGGRM---AKSGGAVIQSF 445 (491)
Q Consensus 417 ~~~R~k~K~~iD~~~~r~---Gk~~gs~~~~~ 445 (491)
...+-.-|..+.|+...+ +|++|-++...
T Consensus 379 ~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~ 410 (451)
T KOG2615 379 KYGPQSQRGTLNGIFRSLGALARAIGPLVSGV 410 (451)
T ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHE
T ss_conf 40781100578889998999999860032210
No 54
>KOG2816 consensus
Probab=97.90 E-value=0.0034 Score=42.95 Aligned_cols=348 Identities=14% Similarity=0.074 Sum_probs=153.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHHHCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 9999999999999999999987----7886512485446799-9999999999999999999963389999999999999
Q gi|254780323|r 29 FIPMTLMMFLVLFNFSTLRPIK----DSLVVPHMGAEIISFV-KLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFV 103 (491)
Q Consensus 29 ~~~~~~~~F~i~~~y~~lr~~r----d~l~~~~~g~e~lp~l-~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~ 103 (491)
.-..++..|.-...+...++.. ++.-.+.++.+....- +...+...++...+..+.+.+|++|+..+.+......
T Consensus 24 ~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~ 103 (463)
T KOG2816 24 EPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTI 103 (463)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998837720344555543113655542120132110223136789988998888778777898899999998
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 99999999984210014652345555310101344578765557999999999999999999999999986409899899
Q gi|254780323|r 104 SFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATR 183 (491)
Q Consensus 104 ~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKR 183 (491)
..-....+. +.|...+.+.. .-++. +.|.. .++.+|+.+.++.-.
T Consensus 104 l~~~~~~~~--------------------------------~~~~~~~~~l~-G~~~~-~~s~~-~a~vadis~~~~R~~ 148 (463)
T KOG2816 104 LPALCLLFQ--------------------------------GYWFFLLLGLS-GGFSA-IFSVG-FAYVADISSEEERSS 148 (463)
T ss_pred HHHHHHHHH--------------------------------HHHHHHHCCCC-CCHHH-HHHHH-HHHHHCCCCHHHHHH
T ss_conf 766886787--------------------------------87655410355-40578-76767-667520211789999
Q ss_pred HHHHHHH----HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCCCCCCC
Q ss_conf 9999998----9999999988999999630123224899999999999999999999984024522332---00001123
Q gi|254780323|r 184 FYATFGL----VGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYS---PKRGSVKK 256 (491)
Q Consensus 184 lf~li~~----g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~ 256 (491)
-+|++++ +..+|..+|+...+. .+.......+.... .+..++..........+++.+ ..+....+
T Consensus 149 ~~gll~~~~~~~~~~~p~~~~~~~~~----~~~a~~f~ia~~~~----~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~ 220 (463)
T KOG2816 149 SIGLLSGTFGAGLVIGPALGGYLVKF----LGIALVFLIAAASG----ILSLLYMLLFLPESLQEKERSDATLRELTPGS 220 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHH----CCHHHHHHHHHHHH----HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999999998999872105664----47124558999999----99999987415543464101444334457776
Q ss_pred CCCCC---HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 45788---89999998309679999999999999999999999-----999998329-9899999999999999999999
Q gi|254780323|r 257 KLKLS---VLESLRMALNSKYLGYLVLLVICYGTAINLVEGPW-----KEKVRQLYP-TQNSYAQFMGQFIQWTGIVTIV 327 (491)
Q Consensus 257 ~~~~~---~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~-----k~~~~~~~~-~~~~~~af~g~~~~~v~i~tii 327 (491)
..+.. ..+..+...++|-.+.++....+. .+.|.-- ....+..+. |+++. +.+-...++.+.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~----~~~~~~~~~~~~~~yl~~~f~w~~~~~----s~~~~~~~~~~~i 292 (463)
T KOG2816 221 LDSSHVADAFQSLTKVGPDRLLLLLLLVAFLS----SLPEAGGASDVLLLYLKAKFGWNKKEF----SDLLSLVSILGII 292 (463)
T ss_pred CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH----HHHHHCCCCEEEEEEEEEECCCCHHHH----HHHHHHHHHHHHH
T ss_conf 55077777787651268773048999999999----878743652038999961057688889----9999999899999
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999-789999731678999999999999999999984101234666787300207999999999999999876344646
Q gi|254780323|r 328 FMIL-GSNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDS 406 (491)
Q Consensus 328 ~qll-~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p 406 (491)
.|++ .+.+.+.+|.+..+.+--. .-......++++ .. .+..|.+.+ ..+..-...-.
T Consensus 293 ~~l~~~~~l~~~l~~~~~i~lGl~-~~~~~~~~~af~---------------~~--~w~~~~~~v----~~~~~~~~~pa 350 (463)
T KOG2816 293 SQLLLLPLLSSILGEKRLISLGLL-SEFLQLLLFAFA---------------TE--TWMMFAAGV----VVALAGIVFPA 350 (463)
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHH-HHHHHHHHHHHH---------------HC--CHHHHHHHH----HHHHCCCHHHH
T ss_conf 999999999999743203345777-999999999984---------------03--046689889----88720430777
Q ss_pred HHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68777522697673657776788876466777999999999983
Q gi|254780323|r 407 TKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLF 450 (491)
Q Consensus 407 ~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~ 450 (491)
.+-....-.+++++.|...++-++ .-+....++.+...+...+
T Consensus 351 ~~s~~s~~v~~~e~g~v~~~is~i-~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816 351 IRAFASILVSPEEQGKVFGIISGI-EGLSGVVSPALYGNIFALT 393 (463)
T ss_pred HHHHHHHHCCCCCCCEEEHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_conf 876787531645463312499999-9875365799988999998
No 55
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.78 E-value=0.0053 Score=41.47 Aligned_cols=72 Identities=11% Similarity=0.275 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHCCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999998778865124854------46799999999999999999999996338999999999999999999999984210
Q gi|254780323|r 44 STLRPIKDSLVVPHMGAE------IISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYR 117 (491)
Q Consensus 44 ~~lr~~rd~l~~~~~g~e------~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~ 117 (491)
-+.+.+-|.++=.-.|.. ..||+.. .++|.++....+|. ....+....+.+.+..++++...+.++-.|+.
T Consensus 52 ri~DAitDPi~G~isDrt~tr~GrrrP~il~-g~i~~~i~~~llf~--~~~~~~~~~~~~~~~~yil~~~~yT~~~vPy~ 128 (473)
T PRK10429 52 RIWDAINDPIMGWIVNATRSRWGKFKPWILI-GTLANSIVLFLLFS--AHLFEGTAQIVFVCVTYILWGMTYTIMDIPFW 128 (473)
T ss_pred HHHHHHHCCHHEEEHHCCCCCCCCCCHHHHH-HHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHEECCCC
T ss_conf 9999934333325010689988884589988-98999999999974--87865069999999999999999984156300
Q ss_pred C
Q ss_conf 0
Q gi|254780323|r 118 D 118 (491)
Q Consensus 118 ~ 118 (491)
.
T Consensus 129 a 129 (473)
T PRK10429 129 S 129 (473)
T ss_pred C
T ss_conf 0
No 56
>pfam07690 MFS_1 Major Facilitator Superfamily.
Probab=97.67 E-value=0.0073 Score=40.36 Aligned_cols=61 Identities=15% Similarity=0.223 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998329989999999999999999999999997899997316789999
Q gi|254780323|r 286 GTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAII 347 (491)
Q Consensus 286 ~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i 347 (491)
++......-.....+.+..| ++++...+|..+...++..++-..+.+.+.++.||+....+
T Consensus 96 G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~ig~~ig~~i~~~l~~~~~~~~~f~~ 156 (345)
T pfam07690 96 GLGGGALFPAAAALIADWFP-PEERGRALGLLSAGFGLGAALGPLLGGLLASLFGWRAAFLI 156 (345)
T ss_pred HHHHHCCHHHHHHHHHHCCC-HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 70221000899999984089-99999999999886024543124899999970148899999
No 57
>pfam11700 ATG22 Vacuole effluxer Atg22 like. Autophagy is a major survival survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxes, which mediate the efflux of leucine and other amino acids resulting from autophagy. This family also includes other transporter proteins.
Probab=97.53 E-value=0.011 Score=38.90 Aligned_cols=338 Identities=9% Similarity=0.005 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHH
Q ss_conf 67999999999999999999999963389999999999999999999999842100146523455553101013445787
Q gi|254780323|r 63 ISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIY 142 (491)
Q Consensus 63 lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (491)
..+... .+..+..+..|+.+.++++.++||-+-.... ....+....++- ..|+
T Consensus 71 ~~~~~s-is~l~~Al~~P~lGa~AD~~~~rK~~L~~~~---~l~~~~t~~l~~----~~p~------------------- 123 (477)
T pfam11700 71 VLYTFS-ISVLIQAVLFISLGGIADYGNYRKNLLIAFA---LLGGLSTILFLG----VTPD------------------- 123 (477)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH---HHHHHHHHHHHH----HCCC-------------------
T ss_conf 999999-9999999999998999724675109999999---999999999997----0843-------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH--------------------------HHHHHHHHHHHHHHHH
Q ss_conf 65557999999999999999999999999986409899--------------------------8999999998999999
Q gi|254780323|r 143 LAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEE--------------------------ATRFYATFGLVGNVGL 196 (491)
Q Consensus 143 ~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~q--------------------------aKRlf~li~~g~~ig~ 196 (491)
+.|....+|+.+.+.-..... .+-++.-++-++++ .-|.-+.=-+-|.+|+
T Consensus 124 --~~~l~~~L~iia~i~~~~s~v-fyna~LP~la~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vS~~g~a~Gy~Gg 200 (477)
T pfam11700 124 --QYLLGSVLYIIGNICFGASLV-FYNSYLPLLARDDPELRASEEESADGTLSREEYDKLDSLTRTRVSSLGFALGYIGA 200 (477)
T ss_pred --HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCHHHHHHHHHHH
T ss_conf --699999999999999999999-99988676325220000011122334333201100014450442105788987899
Q ss_pred HHHHHHHHHHHHHCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHCC
Q ss_conf 99889999996301232---248999999999999999999999840245223320000-11234578889999998309
Q gi|254780323|r 197 IFAGGIVKTFSKLTNEL---MIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRG-SVKKKLKLSVLESLRMALNS 272 (491)
Q Consensus 197 i~gg~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~k~i~~s 272 (491)
++.-.+........+.. .....-....+.++--.............++.....++. +.-++.-....+.+|.+.|+
T Consensus 201 ~v~l~i~l~~~~~~~~~~~~~~~~~r~~~~~~a~w~~vFslP~f~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~i~~~ 280 (477)
T pfam11700 201 ILVLIISILILFGLGSPDQEGTLSLRLVILIAGLWWLLFSIPWFLWLKDRPGPKGLPSGLNYLTAGWKQLGRTFKQARKL 280 (477)
T ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999736767742125588999999999999999999857788876777750679999999999999999867
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH
Q ss_conf 67999999999999999-99999999999983-29989999999999999999999999997899997316789--9999
Q gi|254780323|r 273 KYLGYLVLLVICYGTAI-NLVEGPWKEKVRQL-YPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTS--AIIT 348 (491)
Q Consensus 273 ~yL~~l~~~v~~~~~~~-tl~e~~~k~~~~~~-~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~--l~i~ 348 (491)
|.+....+-.++|+-.. |++.+.- .+.++. .-++.| ...+...+++...+--++.+++-+|+|.+.. +.+.
T Consensus 281 ~~~~~FL~a~~~y~Dgl~ti~~~~~-iy~~~vlg~s~~~----l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~~~~~ 355 (477)
T pfam11700 281 KDALLFLVAWFLLSDGIATVNSLAI-LFAKTVLGMSTAA----LIVLSITAQLAAVLGAFLWPFLSRRFGLKTKQTLIAI 355 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 7899999999999827989999999-9999870988889----9999999999999999999999989498138999999
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHH
Q ss_conf 999-9999999999984101234666787300207999999999999999876344646687775226976736577767
Q gi|254780323|r 349 PLM-ILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVV 427 (491)
Q Consensus 349 Pi~-~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~i 427 (491)
-.. .++...++++.... ..+. .-..+.|+.++....... +.+-.+|-+.-.-+|++...+.=++.
T Consensus 356 l~~~~~i~l~g~~g~~~~----------~~~~-~~~~~f~~~~~~~G~~~G---~~qs~sRsl~~~liP~~~~~efFGly 421 (477)
T pfam11700 356 IVLWELIPLYGLLGIIPN----------VIGF-KNPWEFYVLAALYGLVLG---GLSSYSRSMYSELIPRGKEALFFSLF 421 (477)
T ss_pred HHHHHHHHHHHHHHHHHH----------HCCC-CCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 999999999999998862----------1143-453999999999999861---46998999999858998531486699
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88876466777999999999983
Q gi|254780323|r 428 DVIGGRMAKSGGAVIQSFIFMLF 450 (491)
Q Consensus 428 D~~~~r~Gk~~gs~~~~~l~~~~ 450 (491)
+.. .|..--+|-++...+....
T Consensus 422 ~~~-gk~ss~lGP~l~g~i~~~t 443 (477)
T pfam11700 422 AIT-DKGSSWIGPLIVGAITDRT 443 (477)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHH
T ss_conf 986-6599999999999999981
No 58
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.52 E-value=0.011 Score=38.82 Aligned_cols=285 Identities=16% Similarity=0.146 Sum_probs=159.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 1232799999999999999999999----877886512485446799999999999999999999996338999999999
Q gi|254780323|r 24 SEAKKFIPMTLMMFLVLFNFSTLRP----IKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVV 99 (491)
Q Consensus 24 ~E~~~~~~~~~~~F~i~~~y~~lr~----~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~ 99 (491)
+-.-.+.....+||..+++....++ +|+..=++..++..+.+.+...-+.+++ .-+++.+|++.++-+..=.
T Consensus 10 ~~~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~l----pa~~~~kk~gyk~gi~lgL 85 (422)
T COG0738 10 SVKLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSL----PAGLLIKKLGYKAGIVLGL 85 (422)
T ss_pred CCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHH
T ss_conf 820189999999999999962211407999999386599999999999998999861----4999998842488999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999998421001465234555531010134457876555799999--9999999999999999999986409
Q gi|254780323|r 100 SFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALF--YVFAELWGAVMINLMFWQFANRITK 177 (491)
Q Consensus 100 ~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~f--Yv~~e~~~~~vis~~FW~~~n~~f~ 177 (491)
..+++.-.+| +|-. ..+.|..-+. |+...=-+.+-+. =-.++....+
T Consensus 86 ~l~avg~~lF----~pAa-------------------------~~~~y~~FL~~lFila~Gi~~Leta--aNp~v~~lg~ 134 (422)
T COG0738 86 LLYAVGAALF----WPAA-------------------------SSKSYGFFLVALFILASGIGLLETA--ANPYVTLLGK 134 (422)
T ss_pred HHHHHHHHHH----HHHH-------------------------HHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHCC
T ss_conf 9999999998----6666-------------------------5112999999999998406888851--4416987277
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-------------CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 899899999999899999999889999996301232-------------2489999999999999999999998402452
Q gi|254780323|r 178 TEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNEL-------------MIYYSMLTLILSSILLMAVYRWMNLYVLTDP 244 (491)
Q Consensus 178 ~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 244 (491)
++.+.|--.+.-+..++|+++|+.....+..+.... ............+..+..+.... ...+.|
T Consensus 135 ~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~--~~~k~p 212 (422)
T COG0738 135 PESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLI--LLSKLP 212 (422)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCCC
T ss_conf 156889989999864169899999999999732251048889999999988756508999999999999999--843597
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHH
Q ss_conf 23320000112345788899999983096799999999999999999999999999983299-89999999999999999
Q gi|254780323|r 245 QQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPT-QNSYAQFMGQFIQWTGI 323 (491)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~-~~~~~af~g~~~~~v~i 323 (491)
+.+..... +.++.+. +...++|+|+++.=++..++|--.-+-...-.-.+..+. +| +++.++++-.++ +++.
T Consensus 213 ~~~~~~~~---~~~~~~~--~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~-~g~~~~~aa~~~s~~-~~~~ 285 (422)
T COG0738 213 DLQVAAPS---LGASGSA--GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEEL-LGLNEQQAAYYLSFF-WVGF 285 (422)
T ss_pred CCCCCCCC---CCCCCCC--HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHH-HHHH
T ss_conf 67856511---2565641--388997574899999999999849999999999999865-996389999999999-9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999978999973167899999999999
Q gi|254780323|r 324 VTIVFMILGSNILKSFRWFTSAIITPLMILI 354 (491)
Q Consensus 324 ~tii~qll~~~ll~r~G~~~~l~i~Pi~~li 354 (491)
++=-|+++++++|+-+...+...-++..+
T Consensus 286 --~vGRFig~~lm~~~~~~k~Laf~a~~~il 314 (422)
T COG0738 286 --MVGRFIGSALMSRIKPEKYLAFYALIAIL 314 (422)
T ss_pred --HHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_conf --99999999999971888999999999999
No 59
>PRK11195 major facilitator family transporter; Provisional
Probab=97.42 E-value=0.015 Score=37.89 Aligned_cols=279 Identities=10% Similarity=0.075 Sum_probs=146.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH--HHH
Q ss_conf 27999999999999999999998778865124854-467999999999999999999999963389999999999--999
Q gi|254780323|r 27 KKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGAE-IISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVS--FFV 103 (491)
Q Consensus 27 ~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e-~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~--~f~ 103 (491)
|++.++....|+=.++=..++..--++..+...+| ..|.+....++|- +++.+.-+.++||++++|+..+.-. ...
T Consensus 3 R~F~~l~~tQfl~AfnDN~ll~~~i~ll~~~~~~~~~~~ll~~~FiLPf-vLfsa~aG~lADr~~K~~vm~~~~~iki~~ 81 (415)
T PRK11195 3 KGFYTIMAAQFFSALADNALLFAAIALLKELHAPDWSQPLLQMVFVLAY-VLLAPFVGAFADSFPKGRVMFIANGIKLAG 81 (415)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 7309999999996877899999999999965581899999999999999-999764778766153289999999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 99999999984210014652345555310101344578765557999999999999999999999999986409899899
Q gi|254780323|r 104 SFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATR 183 (491)
Q Consensus 104 ~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKR 183 (491)
.....++. +| + +.|....+= +-..|=.=.+..-|...+||=-+
T Consensus 82 ~~~~~~g~--~~------------------------l----------l~~~l~g~~-sA~f~PaKYgiLpell~~~~L~~ 124 (415)
T PRK11195 82 CLLMLFGA--HP------------------------L----------LAYGLVGLG-AAAYSPAKYGILTELLPGDKLVK 124 (415)
T ss_pred HHHHHHHH--HH------------------------H----------HHHHHHHHH-HHHHCHHHHHHHHHHCCCCHHHH
T ss_conf 99999999--99------------------------9----------999999998-89845099878998759402056
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH------HH-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 999999899999999889999996301232248------99-99999999999999999998402452233200001123
Q gi|254780323|r 184 FYATFGLVGNVGLIFAGGIVKTFSKLTNELMIY------YS-MLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKK 256 (491)
Q Consensus 184 lf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~------~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 256 (491)
--|++.++..++.++|......+.+........ .. ..........+..+....+..+++.+...+ +.+.+..
T Consensus 125 aNglve~~T~~AILlGti~gg~L~~~~~~~~~~~~~~~~~~~~~~a~~vv~~~~~la~~~sl~IP~~~a~~~-~~~~~~~ 203 (415)
T PRK11195 125 ANGWIEGSTIAAILLGTVLGGVLADPHVASHLLAHLPLIDTPAEAALAVIALAYALAALANLFIPDTGARYP-GQSWNPI 203 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-CCCCCHH
T ss_conf 662999999999999999999997331000132011010115999999999999999999676999997677-7777877
Q ss_pred CCCCCHHHHHHHHHCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 45788899999983096799-99999999999999999999999998329-98999999999999999999999999789
Q gi|254780323|r 257 KLKLSVLESLRMALNSKYLG-YLVLLVICYGTAINLVEGPWKEKVRQLYP-TQNSYAQFMGQFIQWTGIVTIVFMILGSN 334 (491)
Q Consensus 257 ~~~~~~~~~~k~i~~s~yL~-~l~~~v~~~~~~~tl~e~~~k~~~~~~~~-~~~~~~af~g~~~~~v~i~tii~qll~~~ 334 (491)
+...++++..+.+.++|.++ ++....+.+.+..++ -.+.-..+++... |+++.+-.++.+..-+.+-+ .+.++
T Consensus 204 ~l~~~~~~~~~~L~~~~~~~~sllg~s~FW~vga~l-~~~~~~~a~~~Lg~~~~~~~~Lla~~avGIaiGs----~la~~ 278 (415)
T PRK11195 204 ALTRDFADACRVLWRDKLGQISLAVTTLFWGAGATL-RFLVLKWAPVALGIDLSTAAYLQAVVAIGIAVGA----GAAAR 278 (415)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH----HHHHH
T ss_conf 899999999999986739999999999999999999-9989999999859968899999999999999999----99999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999731678999999999
Q gi|254780323|r 335 ILKSFRWFTSAIITPLMI 352 (491)
Q Consensus 335 ll~r~G~~~~l~i~Pi~~ 352 (491)
+.+. +....+.|...
T Consensus 279 l~~~---~~~~~~lP~Gi 293 (415)
T PRK11195 279 LVPL---RTVLRVLPAGI 293 (415)
T ss_pred HHCC---CEECCCCHHHH
T ss_conf 9379---72206322999
No 60
>TIGR00880 2_A_01_02 Multidrug resistance protein; InterPro: IPR004734 Multidrug resistance proteins are molecular pumps that participate in a low energy shock adaptive response in some bacteria. They mediate cellular resistance to toxicants such as cycloheximide (CYH), 4-nitroquinoline N-oxide (4-NQO), cadmium, and hydrogen peroxide in yeast .; GO: 0015238 drug transporter activity, 0015893 drug transport, 0016021 integral to membrane.
Probab=97.42 E-value=0.015 Score=37.87 Aligned_cols=108 Identities=14% Similarity=0.091 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999633899999999999999999999998421001465234555531010134457876555799999999
Q gi|254780323|r 76 ILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVF 155 (491)
Q Consensus 76 ~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~ 155 (491)
++..|+-..+.+|++||++.-.....|.+.-+.++..- | ++ |.|+..+--+.
T Consensus 12 ~~~~P~~~~l~~r~GRk~~~~~g~~~f~~~~~~~al~n-P-h~--------------------------~~~~L~i~R~~ 63 (148)
T TIGR00880 12 LIYSPLSGLLTDRFGRKPVLLVGLFIFVLSQALFALSN-P-HS--------------------------NITVLIISRFL 63 (148)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC-C-CH--------------------------HHHHHHHHHHH
T ss_conf 99999999988421628999999999999999988448-7-23--------------------------79999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCC
Q ss_conf 999999999999999998640989-9899999999899999999889999996---30123
Q gi|254780323|r 156 AELWGAVMINLMFWQFANRITKTE-EATRFYATFGLVGNVGLIFAGGIVKTFS---KLTNE 212 (491)
Q Consensus 156 ~e~~~~~vis~~FW~~~n~~f~~~-qaKRlf~li~~g~~ig~i~gg~~~~~l~---~~~~~ 212 (491)
..+-++...+. ==+...|+++.+ |.+|-+++.+.|.+.|.++|+.+...+. +..+-
T Consensus 64 ~G~~~~~~~~~-g~a~~aD~~~~~~~~~~a~g~~~~~~~~g~~lgP~~G~~~~~~~~~~~w 123 (148)
T TIGR00880 64 QGFGAAAALVA-GAALIADIYPPEEERSVALGLMSAGIALGPILGPPLGGVLANVKQALGW 123 (148)
T ss_pred HHHHHHHHHHH-HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99988899998-9888877426404788999999999999999999998999875540176
No 61
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.36 E-value=0.017 Score=37.41 Aligned_cols=384 Identities=13% Similarity=0.065 Sum_probs=180.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 112327999999999999999999998778865124--85446799999999999--99999999999633899999999
Q gi|254780323|r 23 MSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHM--GAEIISFVKLWCVFPSA--ILFTILYMKLSNILETEKLFYVV 98 (491)
Q Consensus 23 ~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~--g~e~lp~l~~~~~l~~s--~~~~~~y~~l~~~~~~~~l~~~~ 98 (491)
+.+-.+.++++..-|.+.+.-+.+=+.-....-+.. .++.+..+ .+.|+. -++-..|+.+.+|++.|+.+...
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll---~aiPil~GallRl~~g~l~drfGgR~~~~~s 85 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLL---VAIPILVGALLRLPYGFLTDRFGGRKWTILS 85 (417)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH---HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 4400579999999999999999999998865412148898889999---9999987478998777534012843799999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
Q ss_conf 9999999999999984210014652345555310101344578765557999999999999-----99999999999998
Q gi|254780323|r 99 VSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELW-----GAVMINLMFWQFAN 173 (491)
Q Consensus 99 ~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~-----~~~vis~~FW~~~n 173 (491)
.....+--+..++.. +++.++- |++..++ +++.+++ ..++
T Consensus 86 ~~l~~IP~~~~~~a~-------------------------------~~~~~~~-ll~~gll~G~~GasFav~m---~~~s 130 (417)
T COG2223 86 MLLLLIPCLGLAFAV-------------------------------TYPSTWQ-LLVIGLLLGLAGASFAVGM---PNAS 130 (417)
T ss_pred HHHHHHHHHHHHHHC-------------------------------CCCCHHH-HHHHHHHHHCCCCEEHCCC---CCCC
T ss_conf 999999999999971-------------------------------2875689-9999999701663000025---4421
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 64098998999999998999999998899999963012322489999999999999999999998402452233200001
Q gi|254780323|r 174 RITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGS 253 (491)
Q Consensus 174 ~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 253 (491)
.-|-++.-.---|+-+ .||+|..+.......+....+...+.......... +.+..+..+... ++..+. .+
T Consensus 131 ~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~-l~v~~v~~~~~~---~d~p~~----r~ 201 (417)
T COG2223 131 FFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVA-LAIAAVLAWLGM---NDVPEH----RA 201 (417)
T ss_pred CCCCHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH---CCCHHH----HC
T ss_conf 1188544418988760-55301999999889999997258999999999999-999999999984---768665----23
Q ss_pred CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 12345788899999983096799999999999999999999999999983299899999999999999999999999978
Q gi|254780323|r 254 VKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGS 333 (491)
Q Consensus 254 ~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~ 333 (491)
+.++... +.+|.+.++|....+++.....--.---+...+-.+.+++|++....+..+....... .-+.--+++
T Consensus 202 ~~~~~~~---~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~---g~l~Rp~GG 275 (417)
T COG2223 202 SVKPQLP---AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLI---GALARPLGG 275 (417)
T ss_pred CCCCCCH---HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH---HHHHHHCCC
T ss_conf 5553200---5778886382069999999999999999999999999986498723188999987889---999985044
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
Q ss_conf 99997316789999999999999999999841012346667873002079999999999999998763446466877752
Q gi|254780323|r 334 NILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFI 413 (491)
Q Consensus 334 ~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~ 413 (491)
++-+|+|=+.+..+.=..+.++.... .+..+.... ..+....+.......++. --.+-..|.
T Consensus 276 ~LsDR~Gg~rv~~~~f~~~~~~~~~l---~~~~~~~~~-------~~~~~~~~~~~l~l~~~~--------G~GnGsvfk 337 (417)
T COG2223 276 WLSDRIGGRRVTLAVFVGMALAAALL---SLFLTGFGH-------GGSFVVFVAVFLALFVFA--------GLGNGSVFK 337 (417)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHH---HCCCCCCCC-------CCCHHHHHHHHHHHHHHH--------CCCCCHHEE
T ss_conf 44331353447999999999999999---705634466-------764399999999999991--------567630033
Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 26976736577767888764667779999999999830000233379999999999999999999
Q gi|254780323|r 414 PLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVN 478 (491)
Q Consensus 414 pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~~~ 478 (491)
-+|...|.. -..+-|++...|--+|-.+-..+.......+.....-.........|..|.+..+
T Consensus 338 ~Ip~if~~~-~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 338 MIPVIFPKE-TGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred ECHHHHHHH-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 131877866-4678879988542566540489999998426379999999999999999999999
No 62
>TIGR00881 2A0104 phosphoglycerate transporter family protein; InterPro: IPR000849 Proteins in this group are involved in the transport system that mediates the uptake of a number of sugar phosphates as well as the regulatory components that are responsible for induction of this transport system by external glucose 6-phosphate. In Escherichia coli its role in transmembrane signalling may involve sugar-phosphate-binding sites and transmembrane orientations similar to those of the transport protein . The following proteins in this entry, involved in the uptake of phosphorylated metabolites, are evolutionary related , : E. coli, Bacillus subtilis and Haemophilus influenzae glycerol-3- phosphate transporter (gene glpT). Salmonella typhimurium phosphoglycerate transporter (gene pgtP). E. coli and S. typhimurium hexose-6-phosphate transporter (gene uhpT). E. coli and S. typhimurium protein uhpC. UhpC is necessary for the expression of uhpT and seems to act jointly with the uhpB sensor/kinase protein. Human glucose 6-phosphate translocase . These proteins of about 50 kDa apparently contain 12 transmembrane regions.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=97.33 E-value=0.018 Score=37.18 Aligned_cols=221 Identities=14% Similarity=0.089 Sum_probs=119.6
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999963389999999999999999999999842100146523455553101013445787655579999999999999
Q gi|254780323|r 81 LYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWG 160 (491)
Q Consensus 81 ~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~ 160 (491)
+.+.++||.+.|..+..=++..++.=+.|++.-+..+ +-|....++.....+-
T Consensus 49 ~~G~~sDr~~~r~fl~~GL~l~a~v~~~~gfs~watS---------------------------~l~~~~~l~~l~G~fQ 101 (404)
T TIGR00881 49 VMGMVSDRSNPRVFLAIGLILCAIVNIFFGFSTWATS---------------------------SLWVMAALMALNGLFQ 101 (404)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH---------------------------HHHHHHHHHHHHHHHH
T ss_conf 7566532676489999999999999999885223578---------------------------9999999999998877
Q ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCCCH--HHHHH-HHHHHHHHHHHHHHHH
Q ss_conf 99999999999986409899899999999899999999889999-99630123224--89999-9999999999999999
Q gi|254780323|r 161 AVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVK-TFSKLTNELMI--YYSML-TLILSSILLMAVYRWM 236 (491)
Q Consensus 161 ~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~-~l~~~~~~~~~--~~~~~-~~~~~~~~~~~l~~~~ 236 (491)
..=-.. --..+.+=|..+|--+..++-+.+-|+|+.+.+.++. ......+.... +.... ..+..++++..+.
T Consensus 102 G~G~P~-~~r~~~~W~~~~eRGt~~~~wn~~~nvGG~~~pp~~~~~~~~~~~w~~~~~~~~~g~~aii~s~~~~~~~--- 177 (404)
T TIGR00881 102 GMGWPP-CGRLLTKWFSRSERGTWVAIWNISHNVGGGLLPPLVLFGIALLYSWHVVSSFIVPGIIAIIVSLICLLLL--- 177 (404)
T ss_pred HHCCCH-HHCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_conf 506752-1240232157653112667788898875789999999999988165568899999999999988954411---
Q ss_pred HHHCCCC---------CCCC---CCCCCCCCC-CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q ss_conf 9840245---------2233---200001123-45788899999983096799999999999999999999999999-98
Q gi|254780323|r 237 NLYVLTD---------PQQY---SPKRGSVKK-KLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKV-RQ 302 (491)
Q Consensus 237 ~~~~~~~---------~~~~---~~~~~~~~~-~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~-~~ 302 (491)
+..+.+ +++. -+++.++++ ++.....-..+.+.+||++..|++--+.-..+.+.++--...++ ++
T Consensus 178 -~~~p~~~GL~~~e~~~~~~~~~l~~~~~~~~~~~~~~~~i~~~~vl~n~~lW~is~~~~fVy~vr~~~~~W~~~YL~~~ 256 (404)
T TIGR00881 178 -RDSPQSVGLPKLEEMPNEEGGGLPEEDKEKKEEELTKKEIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWGPLYLTQE 256 (404)
T ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf -5777778869755676888863365033443530315776567774161356899999999999999970305665653
Q ss_pred HCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q ss_conf 3299899999999999999999-9999999789
Q gi|254780323|r 303 LYPTQNSYAQFMGQFIQWTGIV-TIVFMILGSN 334 (491)
Q Consensus 303 ~~~~~~~~~af~g~~~~~v~i~-tii~qll~~~ 334 (491)
..-+.++-...+-.|+ +-+++ |++.=.++.+
T Consensus 257 kg~s~~~~~~~~~~~E-~gglvGtll~GW~SDk 288 (404)
T TIGR00881 257 KGFSKEKASAAFTLFE-LGGLVGTLLAGWLSDK 288 (404)
T ss_pred CCCCHHCCCHHHHHHH-HHHHHHHHHHHHHHHH
T ss_conf 0655102314457888-8788999999999999
No 63
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.33 E-value=0.019 Score=37.13 Aligned_cols=31 Identities=16% Similarity=0.186 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1123279999999999999999999987788
Q gi|254780323|r 23 MSEAKKFIPMTLMMFLVLFNFSTLRPIKDSL 53 (491)
Q Consensus 23 ~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l 53 (491)
.++..+..+....+.+....|+....==.++
T Consensus 106 ~~~~~k~~ya~vtY~l~~l~YT~vniPy~al 136 (467)
T COG2211 106 FSMTGKLIYALVTYMLLGLGYTLVNIPYGAL 136 (467)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHEECCHHHC
T ss_conf 4556424899999999999998311725314
No 64
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=97.27 E-value=0.022 Score=36.63 Aligned_cols=253 Identities=13% Similarity=0.067 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999877886512485446799999--999999999999999996338999999999999999999
Q gi|254780323|r 31 PMTLMMFLVLFNFSTLRPIKDSLVVPHMGAEIISFVKLW--CVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAI 108 (491)
Q Consensus 31 ~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e~lp~l~~~--~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~ 108 (491)
.+.+..++.+.+-...+|..++++.+...+|.-+..+-. ...-+...+-++-+-...+++.+.++......+.....
T Consensus 101 ~l~~~~~l~G~g~~~~~pa~~Aliad~t~~~~R~~~f~l~~~a~niG~~iGpllGg~l~~~~~~~~f~~~a~~~~l~~~- 179 (400)
T PRK11646 101 LLWFSCILSGLGGTLFDPPRSALVIKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAA- 179 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 9999999999985646799999999708876899999999999999999999999999986489999999999999999-
Q ss_pred HHHHHHHCCCCCCCCH---HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 9999842100146523---4555531010134457876555799999999999999999999999998640989989999
Q gi|254780323|r 109 FAFLLYPYRDFLHPSP---ESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFY 185 (491)
Q Consensus 109 f~~~l~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf 185 (491)
+.....|.++.-..+. ...+......+...... ....++....-. ...+. -+++|.... ...+
T Consensus 180 ~~~~~~p~~~~~~~~~~~~~~~~~vl~dr~f~~~~l------~~~~~~~~~~q~-~~~lp----l~~~~~~~~---~~~~ 245 (400)
T PRK11646 180 FNAWLLPAYKLSTVRTPVREGMTRVLRDKRFVTYVL------TLAGYYMLAVQV-MLMLP----IMVNDIAGS---PSAV 245 (400)
T ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH------HHHHHHHHHHHH-HHHHH----HHHHHHCCC---HHHH
T ss_conf 999957866666667636778999972688999999------999999999999-99999----999985587---8999
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 999989-9999999889999996301232248999999999999999999999840245223320000112345788899
Q gi|254780323|r 186 ATFGLV-GNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLE 264 (491)
Q Consensus 186 ~li~~g-~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (491)
+.+-.. +.+..++-...+++..++............+...+....
T Consensus 246 g~l~~~~~~v~v~lq~pl~~~~~kr~~~~~~l~~G~~l~~~g~~~~---------------------------------- 291 (400)
T PRK11646 246 KWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPI---------------------------------- 291 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH----------------------------------
T ss_conf 9999999999999999999999985472999999999999999999----------------------------------
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998309679999999999999999999999999998329989999999999999999999999997899997
Q gi|254780323|r 265 SLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKS 338 (491)
Q Consensus 265 ~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r 338 (491)
...+| +..+...++++++-..+.+=.....+.+.. +++.+.+|+|.++...++-..+=-.+++++.+.
T Consensus 292 ---~~~~~--~~~~~i~~~lftiGe~l~~P~~~s~va~la-p~~~rG~y~G~~~~~~~lG~~~Gp~~gG~L~d~ 359 (400)
T PRK11646 292 ---GMVSN--LQQLFTLICLFYIGSIIAEPARETLSASLA-DARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred ---HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf ---99988--999999999999999999754899999838-965432376299999999999889899999955
No 65
>pfam03137 OATP Organic Anion Transporter Polypeptide (OATP) family. This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules). Thus, Tamai et al. initiated the current scheme of using digits for rat OATPs and letters for human ones. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. Thi
Probab=97.22 E-value=0.024 Score=36.28 Aligned_cols=175 Identities=14% Similarity=0.117 Sum_probs=89.5
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CCCHHHH--HHHHHHHHHHHHH
Q ss_conf 99999864098998999999998999999998899999963012--------------3224899--9999999999999
Q gi|254780323|r 168 FWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTN--------------ELMIYYS--MLTLILSSILLMA 231 (491)
Q Consensus 168 FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~--------------~~~~~~~--~~~~~~~~~~~~~ 231 (491)
=++++.|...++++.-+.|++.+...+|-.+|-.+...+.+.-. +.+-+.. ...++..+..+..
T Consensus 160 G~tYiDdnv~~~~s~~Yigi~~~~~~lGP~~Gf~lg~~~L~~yvd~~~~~~~~~~i~~~dprWvGAWWLGfli~g~~~~~ 239 (582)
T pfam03137 160 GISYIDDNVKSKNSPLYLGILFTLAMFGPAIGFLLGSFCLRLYVDFGRVPTEDVIITPTDPRWVGAWWLGFLVCGGLLLL 239 (582)
T ss_pred CCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 61143167774557199999999987646899999998885001556688654667878814777888899999999999
Q ss_pred HHH--HHHHHCCCCCCC-----------C-CCCCCCCCCCC-------CCCHHHHHHHHHCCHHHHHHHHHHHHHH-HHH
Q ss_conf 999--999840245223-----------3-20000112345-------7888999999830967999999999999-999
Q gi|254780323|r 232 VYR--WMNLYVLTDPQQ-----------Y-SPKRGSVKKKL-------KLSVLESLRMALNSKYLGYLVLLVICYG-TAI 289 (491)
Q Consensus 232 l~~--~~~~~~~~~~~~-----------~-~~~~~~~~~~~-------~~~~~~~~k~i~~s~yL~~l~~~v~~~~-~~~ 289 (491)
... ...-+..++++. . ...+..++++. -.++...+|.+++||-...+.+-..... ...
T Consensus 240 ~aipl~~FPk~Lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~Ll~N~~~m~~~l~~~~~~~~~~ 319 (582)
T pfam03137 240 SAIPFFFFPKELPKAGRLASLDLTRPKAKDETRKQAEEPKSGKSAPRFLKDFPKSLKRLLTNPTFMLVVLAQIFESSVIA 319 (582)
T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999838511584032211221002331022320233333320115577899999999759199999999999999998
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999832998999999999999999999999-999789999731678999
Q gi|254780323|r 290 NLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVF-MILGSNILKSFRWFTSAI 346 (491)
Q Consensus 290 tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~-qll~~~ll~r~G~~~~l~ 346 (491)
.+..|.-| +++.+|.-+...++++.. .+.+-+... +++++.++||+.+..--.
T Consensus 320 G~~tF~pK-ylE~qF~~sas~A~~l~G---~i~vp~~~~G~llGG~ivkk~kl~~~~~ 373 (582)
T pfam03137 320 GYSTFLPK-YLETQYGQSASYANFLTG---VVALPAAAVGILIGGYIIKKFKLTARGM 373 (582)
T ss_pred HHHHHHHH-HHHHHHCCCHHHHHHHHH---HHHHHHHHHHHHHHHHEEEECCCCHHHH
T ss_conf 89887578-889882887899999998---7888888999875432132207678999
No 66
>TIGR00895 2A0115 MFS transporter, aromatic acid:H+ symporter (AAHS) family; InterPro: IPR004746 Benzoate transport proteins belong to this group. Benzyl alcohol, benzaldehyde, benzoate, and anthranilate are metabolized via catechol, cis,cis-muconate, and the beta-ketoadipate pathway in some bacteria.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=97.15 E-value=0.028 Score=35.74 Aligned_cols=364 Identities=13% Similarity=0.090 Sum_probs=202.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----HHH
Q ss_conf 87811232799999999999999999999877886512-485446799999999999999999999996338-----999
Q gi|254780323|r 20 AVKMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPH-MGAEIISFVKLWCVFPSAILFTILYMKLSNILE-----TEK 93 (491)
Q Consensus 20 ~i~~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~-~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~-----~~~ 93 (491)
+..+-.++.+...++..++=++-.-++=-.-.++.-|. .|+...=++..+..+ .+..=-.+.+.++||++ |+|
T Consensus 10 ~~~r~~~~~~~~~~l~~l~DG~Dl~~~gf~ap~l~~~w~l~~~~~G~l~S~gL~-G~~~Gal~~G~~aDr~GhlGvsR~r 88 (413)
T TIGR00895 10 PLSRYQWRAIILSFLIMLVDGLDLAALGFAAPALSAEWGLDPVQLGFLLSAGLI-GMAFGALFFGPLADRIGHLGVSRKR 88 (413)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 885689999999999999625999999999768888858891410078999999-9998799998787865035413999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998421001465234555531010134457876555799999999999999999999999998
Q gi|254780323|r 94 LFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFAN 173 (491)
Q Consensus 94 l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n 173 (491)
+....+..|+++=++.++-- + .. ... ++|-..+ .. .|..+-. --+++.
T Consensus 89 ~l~~~~llF~~ft~~~a~A~----~-----------~~-qL~-------~~R~~AG------lG-lGg~~pn--~~aL~s 136 (413)
T TIGR00895 89 VLLWSILLFSVFTLLCALAT----N-----------VT-QLL-------ILRFLAG------LG-LGGLMPN--LIALVS 136 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHC----C-----------HH-HHH-------HHHHHHH------HH-HHHHHHH--HHHHHH
T ss_conf 99999999999999988740----4-----------79-999-------9999985------54-9999999--999998
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH-HHHHHHHHHHHH-------H-HHH------
Q ss_conf 6409899899999999899999999889999996301232248999999-999999999999-------9-998------
Q gi|254780323|r 174 RITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTL-ILSSILLMAVYR-------W-MNL------ 238 (491)
Q Consensus 174 ~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~l~~-------~-~~~------ 238 (491)
|+...|--...-++...|=++|...||.+..++....+ +...-... +...++...+.. + ..+
T Consensus 137 EY~p~r~R~~~vg~~~~Gy~~G~~~gg~l~~~LiP~~G---Wr~~F~vGG~~Pl~ll~~l~~~LPES~~fl~~kg~~~~~ 213 (413)
T TIGR00895 137 EYAPKRFRGTAVGLMFCGYAIGAAVGGFLAGWLIPAFG---WRSLFYVGGIIPLLLLLLLMRFLPESIDFLVEKGKRPEK 213 (413)
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHH
T ss_conf 43576334668888887678999999999888754440---799999999999999999997768768989770887579
Q ss_pred ------HCCCCCCCCCCC----CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH-HHHHHHHH--HHHH-HHHHHC
Q ss_conf ------402452233200----001123457888999999830967999999999999-99999999--9999-999832
Q gi|254780323|r 239 ------YVLTDPQQYSPK----RGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYG-TAINLVEG--PWKE-KVRQLY 304 (491)
Q Consensus 239 ------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~-~~~tl~e~--~~k~-~~~~~~ 304 (491)
.+.++.+.+..+ +.+++++.....++..|.+++.++.+.-..+-++|. +....+|+ .|.- .+....
T Consensus 214 ~~~~~n~I~p~~~~~~~~Rfvl~~~~~~~~~~~~~~~~~~lF~~~~~~~T~~LW~~y~G~~~~~~Y~l~~WlP~~L~~~~ 293 (413)
T TIGR00895 214 VRRIVNAIAPQLQAEAQSRFVLALPEQKSAQKTKRSVVKLLFQGKTAKITVLLWLLYFGMLLVGVYFLTNWLPSKLMVEL 293 (413)
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99998775454225765425776335410013578999987334687577999999999999999999961134566534
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 99899999999999999999999999978999973167899999999999999999998410123466678730020799
Q gi|254780323|r 305 PTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLAL 384 (491)
Q Consensus 305 ~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~ 384 (491)
--+.+.++.++. .++.-.++=.++.+++..|+|.+.+....++...+...........++..... +
T Consensus 294 G~~~~~~~~~~~---~~~~Gg~~G~~~~g~l~Drl~~~~~~~~~~l~~avf~~~~~~~~~~~~~~~l~-----------~ 359 (413)
T TIGR00895 294 GFSLSKAAIVGA---LFNFGGVIGSIIFGWLADRLGPRFVTALLLLLGAVFAVLVGSSTLFSPTLLLL-----------L 359 (413)
T ss_pred CCCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------H
T ss_conf 867778999999---99998999999999999993761999999999999999999864102999999-----------9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999876344646687775226976736577767888764667779999
Q gi|254780323|r 385 AVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGAVI 442 (491)
Q Consensus 385 ~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~ 442 (491)
.+..|... .-..+.-|+.--. . =|++.|.-+-++-=+++ |.|=.+|-++
T Consensus 360 ~~~~G~~~-~G~~~~~~a~m~~----~---Yp~~~RaTGvGw~~giG-R~Ga~~gP~~ 408 (413)
T TIGR00895 360 GAIAGLFV-NGGQSGLYALMAE----F---YPTAIRATGVGWAIGIG-RLGAIIGPIL 408 (413)
T ss_pred HHHHHHHH-HHHHHHHHHHHHH----C---CCHHCCHHHHHHHHHHH-HHHHHHHHHH
T ss_conf 99999998-8588989875251----0---40102146788888756-8999899999
No 67
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.12 E-value=0.03 Score=35.54 Aligned_cols=135 Identities=10% Similarity=0.098 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 89989999999989999999988999999630123224899999999999999999999984024522332000011234
Q gi|254780323|r 178 TEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKK 257 (491)
Q Consensus 178 ~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (491)
..+.....|++.+...++.+++......+.++.+......... .+.++....+.
T Consensus 251 ~~~~~~~~g~~~~~~gi~~~l~~~~~G~l~dr~g~~~~~~~~~--~~~~~~l~~l~------------------------ 304 (406)
T PRK09874 251 VSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITAL--IISVLLLIPMS------------------------ 304 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH--HHHHHHHHHHH------------------------
T ss_conf 4449999999999999999999999999998738399999999--99999999999------------------------
Q ss_pred CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 57888999999830967999999999999999999999999999832998999999999999999999999999789999
Q gi|254780323|r 258 LKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILK 337 (491)
Q Consensus 258 ~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~ 337 (491)
...++....++ .+++++......-.....+.+.. +++++.+.+|.++...++-..+--++.+.+..
T Consensus 305 -----------~~~~~~~l~i~--~~l~G~g~g~~~P~~~~~~~~~~-~~~~~G~~~g~~~~~~~lG~~~GPll~G~l~~ 370 (406)
T PRK09874 305 -----------FVQTPLQLGIL--RFLLGAADGALLPAVQTLLVYNS-SNQIAGRIFSYNQSFRDIGNVTGPLMGAAISA 370 (406)
T ss_pred -----------HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -----------99759999999--99999999999999999998758-88477799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 731678999999999
Q gi|254780323|r 338 SFRWFTSAIITPLMI 352 (491)
Q Consensus 338 r~G~~~~l~i~Pi~~ 352 (491)
.+|......++-.+.
T Consensus 371 ~~G~~~~f~i~a~~~ 385 (406)
T PRK09874 371 NYGFRAVFLVTAGVV 385 (406)
T ss_pred HCCHHHHHHHHHHHH
T ss_conf 748599999999999
No 68
>KOG2325 consensus
Probab=97.03 E-value=0.035 Score=34.95 Aligned_cols=162 Identities=15% Similarity=0.134 Sum_probs=97.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCC--HHHHH
Q ss_conf 87811232799999999999999999999877886512-4854467999999999-99999999999996338--99999
Q gi|254780323|r 20 AVKMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPH-MGAEIISFVKLWCVFP-SAILFTILYMKLSNILE--TEKLF 95 (491)
Q Consensus 20 ~i~~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~-~g~e~lp~l~~~~~l~-~s~~~~~~y~~l~~~~~--~~~l~ 95 (491)
+-++.+|+...+.....|+....+++.-+..++-..+. -||+.-.+-....+-. .-....++|++=.+|.. ++=+.
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli 106 (488)
T KOG2325 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLI 106 (488)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHH
T ss_conf 23378628599999999999622148884032544314899873210299999888988601150024235677514779
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999842100146523455553101013445787655579999999999999999999999999864
Q gi|254780323|r 96 YVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRI 175 (491)
Q Consensus 96 ~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~ 175 (491)
...++.+.++ ++|..-+ ..+.+-+ |..=+-|+...+ |.-..+++ =+++.+.
T Consensus 107 ~s~ii~~~g~------llY~~l~-------------~~~~~~~--------y~mL~~R~l~Gv-g~~n~a~l-R~Y~a~~ 157 (488)
T KOG2325 107 VSFLIAIIGN------LLYLALA-------------YVPNGVK--------YLMLVARILTGV-GVGNFAVL-RAYIADA 157 (488)
T ss_pred HHHHHHHHHH------HHHHHHH-------------HCCCCHH--------HHHHHHHHHCCC-CCCCHHHH-HHHHHHC
T ss_conf 9999999999------9999998-------------6242307--------799999997575-75119999-9999713
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 09899899999999899999999889999996301
Q gi|254780323|r 176 TKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLT 210 (491)
Q Consensus 176 f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~ 210 (491)
.+++|-.|-+...+.|-.+|.++|+.+-..+....
T Consensus 158 s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg 192 (488)
T KOG2325 158 STVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLG 192 (488)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 67210299999851289999998677999873016
No 69
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.00 E-value=0.037 Score=34.76 Aligned_cols=275 Identities=12% Similarity=0.073 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 99999999999999999998----77886512-48544679999999999999999-99999963389999999999999
Q gi|254780323|r 30 IPMTLMMFLVLFNFSTLRPI----KDSLVVPH-MGAEIISFVKLWCVFPSAILFTI-LYMKLSNILETEKLFYVVVSFFV 103 (491)
Q Consensus 30 ~~~~~~~F~i~~~y~~lr~~----rd~l~~~~-~g~e~lp~l~~~~~l~~s~~~~~-~y~~l~~~~~~~~l~~~~~~~f~ 103 (491)
.-.+.-.|+--.+||+.|-. +.++.-+. .+.+.+-.+-. .+-++-.+.. +-+.+++|.++|+....-++.-+
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s--~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsa 105 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGS--AFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSA 105 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHH
T ss_conf 99999999999999999976763067788745989899999999--9999999988876652146787544258799999
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 99999999984210014652345555310101344578765557999999999999999999999999986409899899
Q gi|254780323|r 104 SFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATR 183 (491)
Q Consensus 104 ~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKR 183 (491)
+.-++|++.- +.|+..++++....|-..=-.= --..+.+=|+.+|-.|
T Consensus 106 i~nil~Gfs~-------------------------------s~~~~~~l~~lng~fQg~Gwpp-~~~~i~~Wfsr~eRG~ 153 (448)
T COG2271 106 IVNILFGFSP-------------------------------SLFLFAVLWVLNGWFQGMGWPP-CARTITHWFSRKERGT 153 (448)
T ss_pred HHHHHHHHHH-------------------------------HHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHCCCCCCCC
T ss_conf 9999986217-------------------------------9999999999989885279837-7868998758545674
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-------CCCCCCCC--
Q ss_conf 99999989999999988999--9996301232-248999999999999999999999840245-------22332000--
Q gi|254780323|r 184 FYATFGLVGNVGLIFAGGIV--KTFSKLTNEL-MIYYSMLTLILSSILLMAVYRWMNLYVLTD-------PQQYSPKR-- 251 (491)
Q Consensus 184 lf~li~~g~~ig~i~gg~~~--~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-------~~~~~~~~-- 251 (491)
..++=+..-|+|+.+.+.++ ..+..+.+-. ..+......+..++.+. .+-+..+++ +..+++.+
T Consensus 154 ~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~----~~~rd~Pqs~GLP~ie~~~~d~~e~~ 229 (448)
T COG2271 154 WWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILL----FLLRDRPQSEGLPPIEEYRGDPLEIY 229 (448)
T ss_pred EEEEEHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH----HHHCCCCCCCCCCCHHHHHCCCHHHH
T ss_conf 68874544422350579999999997542565677887899999999999----99479911149998788606822233
Q ss_pred CCCCCCCCCCHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 011234578889999-998309679999999999999999999999999998329-989999999999999999999999
Q gi|254780323|r 252 GSVKKKLKLSVLESL-RMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYP-TQNSYAQFMGQFIQWTGIVTIVFM 329 (491)
Q Consensus 252 ~~~~~~~~~~~~~~~-k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~-~~~~~~af~g~~~~~v~i~tii~q 329 (491)
.++++++..+.+|.+ +.+++||++..++...++--++..-++----.++.|... +.++-..-++.|+..--.-++++=
T Consensus 230 ~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~LL~G 309 (448)
T COG2271 230 EEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAG 309 (448)
T ss_pred HHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 32025788649999999997280999999999999999999864278999980187777788999999997627889999
Q ss_pred HHHHHHH-HHHHHH
Q ss_conf 9978999-973167
Q gi|254780323|r 330 ILGSNIL-KSFRWF 342 (491)
Q Consensus 330 ll~~~ll-~r~G~~ 342 (491)
.++..+. .|.|..
T Consensus 310 wlSDklfkgrR~p~ 323 (448)
T COG2271 310 WLSDKLFKGRRGPM 323 (448)
T ss_pred HHHHHHCCCCCCHH
T ss_conf 98876504664649
No 70
>PRK09848 glucuronide transporter; Provisional
Probab=96.97 E-value=0.039 Score=34.56 Aligned_cols=75 Identities=8% Similarity=0.130 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999877886512485------4467999999999999999999999963389999999999999999999999842
Q gi|254780323|r 42 NFSTLRPIKDSLVVPHMGA------EIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYP 115 (491)
Q Consensus 42 ~y~~lr~~rd~l~~~~~g~------e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p 115 (491)
.--+.+.+-|.++=.-.|. -..||+.. ...|.++....++.-- ..++....+.+.+..++.....+...-.|
T Consensus 52 i~ri~DAvtDPl~G~lsDrt~tr~GrrrP~il~-g~ip~~i~~~llf~~P-~~~~~~~~~~~~~~~yi~~~~~~T~~~iP 129 (457)
T PRK09848 52 LVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLF-GTAPLMIFSVLVFWVP-TDWSHSSKVVYAYLTYMGLGLCYSLVNIP 129 (457)
T ss_pred HHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHH-HHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999933450057410699998882499999-9999999999999577-55463089999999999999999999846
Q ss_pred CCC
Q ss_conf 100
Q gi|254780323|r 116 YRD 118 (491)
Q Consensus 116 ~~~ 118 (491)
+..
T Consensus 130 y~a 132 (457)
T PRK09848 130 YGS 132 (457)
T ss_pred HHH
T ss_conf 976
No 71
>KOG3626 consensus
Probab=96.83 E-value=0.05 Score=33.74 Aligned_cols=170 Identities=14% Similarity=0.111 Sum_probs=86.7
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-----------CHHHHH--HHHHHHHHHHHHHH--H
Q ss_conf 99986409899899999999899999999889999996301232-----------248999--99999999999999--9
Q gi|254780323|r 170 QFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNEL-----------MIYYSM--LTLILSSILLMAVY--R 234 (491)
Q Consensus 170 ~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~-----------~~~~~~--~~~~~~~~~~~~l~--~ 234 (491)
+++.|.-..+++..+.|++...+.+|-++|-.+.....+.-.+. +-+... ..+++++....... .
T Consensus 260 sYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~ 339 (735)
T KOG3626 260 SYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPL 339 (735)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 42145756456708999999999860499999999987713344668888788894146688899999999999999899
Q ss_pred HHHHHCCCCCCC----CCCCCCCCC---CCCC-------CCHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999840245223----320000112---3457-------888999999830967999-9999999999999999999999
Q gi|254780323|r 235 WMNLYVLTDPQQ----YSPKRGSVK---KKLK-------LSVLESLRMALNSKYLGY-LVLLVICYGTAINLVEGPWKEK 299 (491)
Q Consensus 235 ~~~~~~~~~~~~----~~~~~~~~~---~~~~-------~~~~~~~k~i~~s~yL~~-l~~~v~~~~~~~tl~e~~~k~~ 299 (491)
...-...++++. .+.+..+.+ ++.+ .++..++|.+++||.-.. +..-++-........-|.-| +
T Consensus 340 f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPK-y 418 (735)
T KOG3626 340 FFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPK-Y 418 (735)
T ss_pred HHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_conf 838656863212200233102444566666784222668999999999966954899999999999887568876289-9
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q ss_conf 99832998999999999999999999999-999789999731678
Q gi|254780323|r 300 VRQLYPTQNSYAQFMGQFIQWTGIVTIVF-MILGSNILKSFRWFT 343 (491)
Q Consensus 300 ~~~~~~~~~~~~af~g~~~~~v~i~tii~-qll~~~ll~r~G~~~ 343 (491)
++.+|.-+...+.++ .+.+++....+ .++++.+++|+-...
T Consensus 419 LE~Qfg~sas~An~l---~G~i~vp~~~~Gi~lGG~iikkfkl~~ 460 (735)
T KOG3626 419 LETQFGISASLANIL---TGSIGVPAAAVGIFLGGLIIKKFKLSA 460 (735)
T ss_pred HHHHCCCCHHHHHHH---HHHHHHHHHHHHHHCCCEEEEEECCCH
T ss_conf 999818877787888---644314343543310002333313566
No 72
>pfam11700 ATG22 Vacuole effluxer Atg22 like. Autophagy is a major survival survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxes, which mediate the efflux of leucine and other amino acids resulting from autophagy. This family also includes other transporter proteins.
Probab=96.78 E-value=0.054 Score=33.47 Aligned_cols=155 Identities=11% Similarity=0.120 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999864098998999999998999999998899999963012322489999999999999999999
Q gi|254780323|r 156 AELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRW 235 (491)
Q Consensus 156 ~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 235 (491)
.|-.+.+. ++ .=.++++.+.-++.. ....+...++.++.|+..-.++.++.+...............+++. +..
T Consensus 294 ~Dgl~ti~-~~-~~iy~~~vlg~s~~~--l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~~~~~l~~~~~i~l--~g~ 367 (477)
T pfam11700 294 SDGIATVN-SL-AILFAKTVLGMSTAA--LIVLSITAQLAAVLGAFLWPFLSRRFGLKTKQTLIAIIVLWELIPL--YGL 367 (477)
T ss_pred HHHHHHHH-HH-HHHHHHHHHCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH--HHH
T ss_conf 82798999-99-999999870988889--9999999999999999999999989498138999999999999999--999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 99840245223320000112345788899999983096799999999999999999999999999983299899999999
Q gi|254780323|r 236 MNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMG 315 (491)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g 315 (491)
.-... .. .-.+++.-..+.. ++.+.+..-.+-.-.....+..|.+. .++|||
T Consensus 368 ~g~~~----~~---------------------~~~~~~~~f~~~~--~~~G~~~G~~qs~sRsl~~~liP~~~-~~efFG 419 (477)
T pfam11700 368 LGIIP----NV---------------------IGFKNPWEFYVLA--ALYGLVLGGLSSYSRSMYSELIPRGK-EALFFS 419 (477)
T ss_pred HHHHH----HH---------------------CCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCCC-CCHHHH
T ss_conf 99886----21---------------------1434539999999--99999861469989999998589985-314866
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999997899997316789
Q gi|254780323|r 316 QFIQWTGIVTIVFMILGSNILKSFRWFTS 344 (491)
Q Consensus 316 ~~~~~v~i~tii~qll~~~ll~r~G~~~~ 344 (491)
.|...--..+++--++.+.+....|-...
T Consensus 420 ly~~~gk~ss~lGP~l~g~i~~~tg~~r~ 448 (477)
T pfam11700 420 LFAITDKGSSWIGPLIVGAITDRTGNIRN 448 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 99986659999999999999998178223
No 73
>KOG3762 consensus
Probab=96.72 E-value=0.059 Score=33.16 Aligned_cols=183 Identities=14% Similarity=0.178 Sum_probs=91.6
Q ss_pred CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q ss_conf 88999999830967999999999999999999999999999832998999999999999999999999-99978999973
Q gi|254780323|r 261 SVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVF-MILGSNILKSF 339 (491)
Q Consensus 261 ~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~-qll~~~ll~r~ 339 (491)
+.+...-.++.|+.+..+....+..+....++-....=+.++.-. -...|| +-.+++-.+-+. -++..+++++.
T Consensus 359 ~v~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~----~~~LfG-v~~a~~~~gEI~~~ffs~klI~ki 433 (618)
T KOG3762 359 SVLADVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGG----IKTLFG-VVSALCHAGEILFYFFSFKLIEKI 433 (618)
T ss_pred HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CCEEEE-EHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 799999998428877851489999887999999999999861588----542532-122554123388999999999983
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHH
Q ss_conf 16789999999999999999999841012346667873002079999999999999998763446466877752269767
Q gi|254780323|r 340 RWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEF 419 (491)
Q Consensus 340 G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~ 419 (491)
|-....... +.....=|..+. ..-..+.++ | ++.+=|+ ..-.+.-..---+....||..
T Consensus 434 GHv~v~~lg---La~~~~Rf~~~S-----~L~n~W~vL---P--ieilqgi--------t~aliWaa~~sY~s~vaPp~l 492 (618)
T KOG3762 434 GHVNVMYLG---LACNVGRFLYYS-----YLQNPWMVL---P--IEILQGI--------THALIWAAIISYASHVAPPGL 492 (618)
T ss_pred CCCCEEEEH---HHHHHHHHHHHH-----HHCCCHHEE---E--HHHHHHH--------HHHHHHHHHHHHHHHHCCCCC
T ss_conf 661125531---567778999999-----755824111---0--9998789--------999999999999985089752
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 365777678887646677799999999998300002333799999999999999999
Q gi|254780323|r 420 RTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYV 476 (491)
Q Consensus 420 R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~ 476 (491)
|..+++..-+...-+||+.||+++..+...++..+. ..+..++|++|+..
T Consensus 493 ~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~tt-------f~~~giAcl~~l~~ 542 (618)
T KOG3762 493 RATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTT-------FRIFGIACLVTLAL 542 (618)
T ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEHHHHH-------HHHHHHHHHHHHHH
T ss_conf 389999998876035753564430022111015899-------99999999999999
No 74
>PRK03893 putative sialic acid transporter; Provisional
Probab=96.64 E-value=0.067 Score=32.73 Aligned_cols=136 Identities=15% Similarity=0.123 Sum_probs=82.8
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 64098998999999998999999998899999963012322489999999999999999999998402452233200001
Q gi|254780323|r 174 RITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGS 253 (491)
Q Consensus 174 ~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 253 (491)
.-++..++....-..+.|+.+|.+++|.+...+.++. .. ...+..++.++..+..
T Consensus 299 ~g~~~~~~~~~~~~~~lg~~vG~l~~g~L~DriGrr~----~~--~~~~l~~~~~~~~l~~------------------- 353 (486)
T PRK03893 299 LGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRK----AY--VCSLLISQLLIIPVFA------------------- 353 (486)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH----HH--HHHHHHHHHHHHHHHH-------------------
T ss_conf 1888889999999999999999999999998948589----99--9999999999999999-------------------
Q ss_pred CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 12345788899999983096799999999999999999999999999983299899999999999999999999999978
Q gi|254780323|r 254 VKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGS 333 (491)
Q Consensus 254 ~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~ 333 (491)
..+.....+..+.+..+...+-.....-.+..|.||.+ -|++=.|.-+.+-.+-+++.=++.+
T Consensus 354 ----------------~~~~~~~~l~~l~f~~~~~~~G~~~~~~~y~~E~yPT~-vRaTG~G~a~~vGRlG~ii~P~i~g 416 (486)
T PRK03893 354 ----------------IGGANVWVLGLLLFFQQMLGQGIAGLLPKLIGGYFDTE-QRAAGLGFTYNVGALGGALAPILGA 416 (486)
T ss_pred ----------------HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ----------------75646999999999999999999999999988748896-9889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999973167899999999
Q gi|254780323|r 334 NILKSFRWFTSAIITPLM 351 (491)
Q Consensus 334 ~ll~r~G~~~~l~i~Pi~ 351 (491)
.+.++.|...++.+.+..
T Consensus 417 ~L~~~~~lg~~~~~~~~~ 434 (486)
T PRK03893 417 LIAQRLGLGTALGSLSFS 434 (486)
T ss_pred HHHHCCCCHHHHHHHHHH
T ss_conf 998708951899999999
No 75
>pfam06609 TRI12 Fungal trichothecene efflux pump (TRI12). This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster.It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes.
Probab=96.53 E-value=0.078 Score=32.21 Aligned_cols=77 Identities=5% Similarity=-0.047 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999998778865124854467999999999999999999999963389999999999999999999
Q gi|254780323|r 32 MTLMMFLVLFNFSTLRPIKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIF 109 (491)
Q Consensus 32 ~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f 109 (491)
+.+..|+...-.++.-+.--++.-+-.+.+.+.|.-.. -+..+.++.++|+|+.+.++||.++.....+|.+-.++.
T Consensus 49 l~l~~~~~~ld~tivatAlP~I~~dl~~~~~~~W~~ta-ylLast~~~pl~GkLsDifGRK~~~l~~~~lf~vGsiic 125 (598)
T pfam06609 49 FSLNVCATYFVLQASASALPNILQDIGQSENQGLFSTL-WTMGQAVSILMMGRLTDRFGRRPFVIATHIIGLVGAIVG 125 (598)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHH-HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999950027663471699870898773549999-999999999737689878367999999999999999999
No 76
>pfam03092 BT1 BT1 family. Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters. One such protein, previously termed (and is still annotated as) ORFG, was shown to encode a biopterin transport protein using null mutants, thus being subsequently renamed BT1. The significant similarity of ORFG/BT1 to Trypanosoma brucei ESAG10 (a putative transmembrane protein and another member of this family) was previously noted. This family also contains five putative Arabidopsis thaliana proteins of unknown function. In addition, it also contains two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.49 E-value=0.082 Score=32.05 Aligned_cols=274 Identities=12% Similarity=0.003 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999998778865124--85446799999999999999999999996338---99999999999999999999998421
Q gi|254780323|r 42 NFSTLRPIKDSLVVPHM--GAEIISFVKLWCVFPSAILFTILYMKLSNILE---TEKLFYVVVSFFVSFFAIFAFLLYPY 116 (491)
Q Consensus 42 ~y~~lr~~rd~l~~~~~--g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~---~~~l~~~~~~~f~~~~~~f~~~l~p~ 116 (491)
++.+.|-..+-++-+.. +++....+.....+|-++. ++|+-+++.++ -||--+..+.............+.|.
T Consensus 4 ~~~l~~la~~~~~kd~~~~spa~~q~~~~i~~lPW~iK--pl~G~lSD~~Pi~GyrRr~Yl~l~~~l~~~~~l~la~~~~ 81 (425)
T pfam03092 4 AGGLSRLSTQFMLKDRLGIDPARYQRLSGLATLPWVIK--PFTGVLSDGFALFGYRRRPYLALSGLLGGAFALSYGLLPA 81 (425)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHH--HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 66788998889988531989999999999996628998--8899976132015775449999999999999999998237
Q ss_pred CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH-------HHHHHHHH
Q ss_conf 00146523455553101013445787655579999999999999999999999999864098998-------99999999
Q gi|254780323|r 117 RDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEA-------TRFYATFG 189 (491)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qa-------KRlf~li~ 189 (491)
... + ......--....+-+..+|+ ++|..-.|.+ ..+-..+-
T Consensus 82 ~~~---s---------------~~~a~~~l~l~s~g~a~~DV-------------~~Da~vvE~~r~~~~~~~~lqS~~~ 130 (425)
T pfam03092 82 KES---S---------------AAVAAAFIFLSSLGKALVDV-------------LSDALYSERGRQEPLAGPSLVSWIW 130 (425)
T ss_pred CCC---C---------------HHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHCCCCCCCCEEHHHH
T ss_conf 754---2---------------99999999999999999998-------------6546630054207764544000999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH---
Q ss_conf 89999999988999999630123224899999999999999999999984024522332000011234578889999---
Q gi|254780323|r 190 LVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESL--- 266 (491)
Q Consensus 190 ~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 266 (491)
+..++|+++|......+.+..+..........+-+. .++... ... .++. .....+.+++...+.++.+
T Consensus 131 ~~~~~G~ll~~~lsG~l~~~~~~~~~f~i~~~lpll-~~~~~~---~~~---e~~~--~~~~~~~~~~~~~~~~~~~~~l 201 (425)
T pfam03092 131 GCSAVGGIIGSVLSGPLLDTFKPQISFLVTAALQLL-TCVDAA---VLK---EEEV--LGLGRPPVPCLLGLNREVISRN 201 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHHHH---HCC---CCCC--CCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999999999999999999855842789999999999-999988---401---2223--3446786203326799999999
Q ss_pred HHHHCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99830967999999-99999999999999999999983299899999999999999999999999978999973167899
Q gi|254780323|r 267 RMALNSKYLGYLVL-LVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSA 345 (491)
Q Consensus 267 k~i~~s~yL~~l~~-~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l 345 (491)
....+.|.+..-.+ +.+.+.......+........+.-..|+=-..|+|....+.++.+++-..+..+.+++..+|...
T Consensus 202 ~~~~~~~~i~~p~l~~~~~~~~~~~~~~~~~F~~~t~~~~gp~F~~~f~g~~~~ig~l~~l~gi~ly~~~l~~~~~R~~~ 281 (425)
T pfam03092 202 WKAFRYPEILAPTLTWISFWAAPLVIAKADMFYYQTNELGGPNFSYSFYGTVKVIGSIAGLLGVTLYNRFLKKHPYRLTF 281 (425)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 99990769999999999998720566754589998436788875999997999999999999999999997359899999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780323|r 346 IITPLMILITGG 357 (491)
Q Consensus 346 ~i~Pi~~li~~~ 357 (491)
..+-++..+.+.
T Consensus 282 ~~t~l~~~~~~l 293 (425)
T pfam03092 282 GVTTVLQVLSGL 293 (425)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999974
No 77
>pfam00083 Sugar_tr Sugar (and other) transporter.
Probab=96.48 E-value=0.083 Score=32.00 Aligned_cols=34 Identities=15% Similarity=0.005 Sum_probs=22.0
Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 26976736577767888764667779999999999
Q gi|254780323|r 414 PLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFM 448 (491)
Q Consensus 414 pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~ 448 (491)
-.|.+.|..+-++.. .+.|+|...+..+...+..
T Consensus 376 lfPt~~R~~~~g~~~-~~~~lg~~v~~~~~~~l~~ 409 (449)
T pfam00083 376 LFPLGVRPKAMAIAT-AANWLANFLIGFLFPIITG 409 (449)
T ss_pred HCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_conf 375869999999999-9999999999999999999
No 78
>PRK10133 L-fucose transporter; Provisional
Probab=96.48 E-value=0.084 Score=31.99 Aligned_cols=288 Identities=13% Similarity=0.084 Sum_probs=144.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 232799999999999999999999----8778865124854467999999999999999999999963389999999999
Q gi|254780323|r 25 EAKKFIPMTLMMFLVLFNFSTLRP----IKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVS 100 (491)
Q Consensus 25 E~~~~~~~~~~~F~i~~~y~~lr~----~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~ 100 (491)
-.-++.++..+||+.++.+.+..+ .||++-++...+.-+++.+...=+.++ .| -+++.+|++-++-+-.=+.
T Consensus 24 ~~~p~~lv~~LFF~wGf~t~l~~~Li~~fk~~f~Ls~~qa~lv~~aff~aY~v~s---iP-ag~li~r~GyK~~ii~GL~ 99 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIP---IP-AGILMKKLSYKAGIITGLF 99 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH---HH-HHHHHHHHCCHHHHHHHHH
T ss_conf 3889999999999999998767789999999909689999899999999999999---88-9999999753999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 99999999999984210014652345555310101344578765557999999999999999999999999986409899
Q gi|254780323|r 101 FFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEE 180 (491)
Q Consensus 101 ~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~q 180 (491)
.+++--++| +|-.. ..-+......+|=+-.. .+.+-+ .=.-+....=++|.
T Consensus 100 l~a~G~llF----~paa~----------------------~~sy~~fL~alFvig~G-la~LQt--aaNPyi~~lG~~e~ 150 (438)
T PRK10133 100 LYALGAALF----WPAAE----------------------IMNYTLFLVGLFIIAAG-LGCLET--AANPFVTVLGPESS 150 (438)
T ss_pred HHHHHHHHH----HHHHH----------------------HHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHCCCCH
T ss_conf 999999999----99988----------------------72699999999999971-999998--08899999789523
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCC------------------CHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 899999999899999999889999996301--232------------------248999999999999999999999840
Q gi|254780323|r 181 ATRFYATFGLVGNVGLIFAGGIVKTFSKLT--NEL------------------MIYYSMLTLILSSILLMAVYRWMNLYV 240 (491)
Q Consensus 181 aKRlf~li~~g~~ig~i~gg~~~~~l~~~~--~~~------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~ 240 (491)
+.+---+-.+..++|.++|+.....+.-.. ... ............+..+..+......
T Consensus 151 a~~RLnlaq~fN~lGt~i~pll~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~pYl~ia~~~~~lal~~~~-- 228 (438)
T PRK10133 151 GHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIML-- 228 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_conf 999999999978789999999999999557751016778634898898887778999999999999999999999999--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHH
Q ss_conf 24522332000011234578889999998309679999999999999999999999999998329--9899999999999
Q gi|254780323|r 241 LTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYP--TQNSYAQFMGQFI 318 (491)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~--~~~~~~af~g~~~ 318 (491)
.+-|+.+ +.++++.++.+..++.+.+.|+|++..=+.-.++|.-.-..+......+..+..+ ++++-+.+.+
T Consensus 229 ~~lP~i~---~~~~~~~~~~~~~~~~~~l~~~~~~~lgv~aiF~YVGaEV~i~s~~i~y~~~~~~g~~~~~a~~~~s--- 302 (438)
T PRK10133 229 TKFPALQ---SDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLT--- 302 (438)
T ss_pred HCCCCCC---CCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH---
T ss_conf 3499888---7642100023302447887404299999999999999999999999999987248986778999999---
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999-99999789999731678999999999999
Q gi|254780323|r 319 QWTGIVTI-VFMILGSNILKSFRWFTSAIITPLMILIT 355 (491)
Q Consensus 319 ~~v~i~ti-i~qll~~~ll~r~G~~~~l~i~Pi~~li~ 355 (491)
...... +--+++..+++|+-.+..+.+.-+..++.
T Consensus 303 --~~~~~~~vGRfig~~ll~~~~~~~~L~~~a~~~iil 338 (438)
T PRK10133 303 --GTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMAL 338 (438)
T ss_pred --HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf --999999999999999982578999999999999999
No 79
>PRK10489 enterobactin exporter EntS; Provisional
Probab=96.39 E-value=0.093 Score=31.62 Aligned_cols=276 Identities=9% Similarity=-0.066 Sum_probs=141.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH--HHHHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999877886512485446799999999--99999999-9999996338999999999999999
Q gi|254780323|r 29 FIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGAEIISFVKLWCVF--PSAILFTI-LYMKLSNILETEKLFYVVVSFFVSF 105 (491)
Q Consensus 29 ~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e~lp~l~~~~~l--~~s~~~~~-~y~~l~~~~~~~~l~~~~~~~f~~~ 105 (491)
.......-|+......+..|.++++.-+-.++|.++-.-..... ..+.++-+ +-+-+....+..-.+...-..|.+
T Consensus 110 ~~~l~~~~~l~g~~~a~~~pA~~a~lp~lV~~~~L~~Anal~~~~~~~~~iiGP~lgG~li~~~g~~~~~~i~a~~~~~- 188 (416)
T PRK10489 110 LLAIYLLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMIGGLLLATGGVAWNYGLAAAGTFI- 188 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH-
T ss_conf 9999999999999988888999999998447898999999999999999898648899999871334999999999999-
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 99999998421001465234555531010134457876555799999999999999999999999998640989989999
Q gi|254780323|r 106 FAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFY 185 (491)
Q Consensus 106 ~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf 185 (491)
..+.+..-+..-.++....+......+++++...-...+...+......+++.. ..+ .....+.+ +.....+
T Consensus 189 ---s~~~l~~l~~~~~~~~~~~~~~~~~~eG~r~l~~~~~l~~~~l~~~~~~~~~~~--~~l-~p~~~~~l--~~~~~~~ 260 (416)
T PRK10489 189 ---TLLPLLRLPALPPPPQPREHPLRSLLAGFRFLLASPLVGGIALLGGLLTMASAV--RVL-YPALADNW--QMSAAQI 260 (416)
T ss_pred ---HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH--HHH-HHHHHHHH--CCCHHHH
T ss_conf ---999997187789998888754789999999998177999999999999999999--999-99999980--8987899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 99998999999998899999963012322489999999999999999999998402452233200001123457888999
Q gi|254780323|r 186 ATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLES 265 (491)
Q Consensus 186 ~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (491)
|++.+...+|+++|+.....+.+........ .......+.......
T Consensus 261 G~l~aa~gvG~llG~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-------------------------------- 306 (416)
T PRK10489 261 GLLYAAIPLGAAIGALTSGWLAHSRRPGLLM--LLSTLGSFLAIGLFG-------------------------------- 306 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH--HHHHHHHHHHHHHHH--------------------------------
T ss_conf 9999999999999999999852456638999--999999999999998--------------------------------
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99983096799999999999999999999999999983299899999999999999999999999978999973167899
Q gi|254780323|r 266 LRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSA 345 (491)
Q Consensus 266 ~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l 345 (491)
-+|.+........+.+.........+....++..| ++.+.+.+|..........-+-+++.+.+.+.+|.+.+.
T Consensus 307 -----~~~~~~~~~~~~~~~G~~~~~~~v~~~t~iQ~~~P-~~~rGRV~s~~~~~~~~~~plG~~~~G~la~~~G~~~~~ 380 (416)
T PRK10489 307 -----LMPMWILGVACLALFGWLSAISSLLQYTLLQTQTP-EAMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASA 380 (416)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -----61599999999999999999999999999998599-998759999999999998998999999999997789999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780323|r 346 IITPLMIL 353 (491)
Q Consensus 346 ~i~Pi~~l 353 (491)
.+.=+.++
T Consensus 381 ~~~g~~~~ 388 (416)
T PRK10489 381 SASGFGLA 388 (416)
T ss_pred HHHHHHHH
T ss_conf 99999999
No 80
>pfam01306 LacY_symp LacY proton/sugar symporter. This family is closely related to the sugar transporter family.
Probab=96.36 E-value=0.096 Score=31.52 Aligned_cols=268 Identities=11% Similarity=0.057 Sum_probs=148.0
Q ss_pred HHHHHHHHHHHCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-
Q ss_conf 99987788651248544679--999999999999999999999633899999999999999999999998421001465-
Q gi|254780323|r 46 LRPIKDSLVVPHMGAEIISF--VKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHP- 122 (491)
Q Consensus 46 lr~~rd~l~~~~~g~e~lp~--l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~- 122 (491)
.-|+-|++.......+..-| .-+|+++-- .+...+-+++.+. +++..+..... +++...+.....-|.++.-..
T Consensus 121 ~~pl~ea~~~~~sr~~~~~YGriRlwGSiGf-ai~a~~~G~l~~~-~p~~~f~~~s~-~~~i~~ll~~~~~~~~~~~~~~ 197 (413)
T pfam01306 121 GAGAIEAYIEKVSRRSNFEYGKARMFGCVGW-ALCASIAGILFSI-DPQIVFWLGSG-FALILALLLMFAKPDKSSSAIV 197 (413)
T ss_pred CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH-HHHHHHHHHHHHC-CCCHHHHHHHH-HHHHHHHHHHHCCCCCCCHHHH
T ss_conf 4279999999998763774213688999999-9999986788752-85289999999-9999999999807876410233
Q ss_pred -CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -234555531010134457876555799999999999999999999999998640-989989999999989999999988
Q gi|254780323|r 123 -SPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRIT-KTEEATRFYATFGLVGNVGLIFAG 200 (491)
Q Consensus 123 -~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f-~~~qaKRlf~li~~g~~ig~i~gg 200 (491)
+....+................+.|...++.+.+...-.+.=+ +|-.|-...+ +.+++.+.+|.....+.+.-+..=
T Consensus 198 ~~~~~~~~~~~~~~~~~~llk~~~~~~f~l~v~g~~~~y~v~d~-~f~~f~~~~~~~~~~g~~~~G~l~s~~v~~E~~~m 276 (413)
T pfam01306 198 ADALGANKSAFSLRLALELFRMPKFWVFVLYVVGVACVYDVFDQ-QFANFFTSFFATPQQGTRVFGYVTTMGELLNALIM 276 (413)
T ss_pred HCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 10101245776477799996154799999999999999887777-78999999963427684312199999999999999
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH
Q ss_conf 99999963012322489999999999999999999998402452233200001123457888999999830967999999
Q gi|254780323|r 201 GIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVL 280 (491)
Q Consensus 201 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~ 280 (491)
.....+.++.+..+.+......+..-.... -...+ ...+..
T Consensus 277 ~~~~~l~~R~G~k~~Llla~~i~~iR~~~~-------------------------------------~~~~~--~~~ii~ 317 (413)
T pfam01306 277 FCAPLIINRIGAKNALLIAGTIMSVRILGS-------------------------------------SFATT--ALEVVI 317 (413)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-------------------------------------HCCCC--HHHHHH
T ss_conf 998999987083989999999999999997-------------------------------------43230--699999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999998329989999999999999999999999997899997316789999999999999
Q gi|254780323|r 281 LVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITG 356 (491)
Q Consensus 281 ~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~ 356 (491)
.-++-++...+....-..++.+.+|.+.+-|.+.=.+....++...+...+++++.+++|...+-.++-.+.++.+
T Consensus 318 ~qlLH~~t~~l~~va~~kyI~~~f~~rl~aT~~~v~~~~~~g~~~~i~s~~~G~l~D~~G~~~ty~il~~i~l~~t 393 (413)
T pfam01306 318 LKMLHMFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFSKQLAMILLSTLAGIMYDSIGFQGAYLVLGGIVLSFT 393 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999998999999999999998679302214999999999988899861128889997037899999999999999
No 81
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=96.35 E-value=0.098 Score=31.46 Aligned_cols=82 Identities=10% Similarity=0.062 Sum_probs=51.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 96799999999999999999999999999983299899999999999999999999999978999973167899999999
Q gi|254780323|r 272 SKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLM 351 (491)
Q Consensus 272 s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~ 351 (491)
|+....++ .+++++...++.-.....+.+.. +++++..-.|.++.....-..+--.+.+.+.+.+|....-.+..+.
T Consensus 303 ~~~~ll~a--~~l~G~G~g~~~P~l~a~~~~~~-p~~~rG~a~g~~~~~~dlG~~iG~~l~G~la~~~G~~~~f~~~a~~ 379 (395)
T PRK05122 303 SPWVALIG--AALTGFGFSLVFPALGVEAVKRV-PPQNRGAALGAYSVFFDLSLGITGPLAGLVASWFGYPSIFLFAALA 379 (395)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 09999999--99999999888899999998649-8724579999999999999999999999999973836899999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780323|r 352 ILITG 356 (491)
Q Consensus 352 ~li~~ 356 (491)
.+++.
T Consensus 380 ~l~~~ 384 (395)
T PRK05122 380 AALGL 384 (395)
T ss_pred HHHHH
T ss_conf 99999
No 82
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=96.33 E-value=0.099 Score=31.39 Aligned_cols=22 Identities=9% Similarity=0.076 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999998778865
Q gi|254780323|r 34 LMMFLVLFNFSTLRPIKDSLVV 55 (491)
Q Consensus 34 ~~~F~i~~~y~~lr~~rd~l~~ 55 (491)
+.-|.+...=++.||+--.++=
T Consensus 57 l~tfa~favgf~~RPlGgivfG 78 (490)
T PRK10642 57 IAALATFSVPFLIRPLGGLFFG 78 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999998857999999
No 83
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=96.29 E-value=0.1 Score=31.23 Aligned_cols=275 Identities=12% Similarity=0.091 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHH
Q ss_conf 79999999999999999999987788651248544679999---99999999999999999963-389999999999999
Q gi|254780323|r 28 KFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGAEIISFVKL---WCVFPSAILFTILYMKLSNI-LETEKLFYVVVSFFV 103 (491)
Q Consensus 28 ~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e~lp~l~~---~~~l~~s~~~~~~y~~l~~~-~~~~~l~~~~~~~f~ 103 (491)
-...+.+..+++.+.-.+-+..-|++.++...+|...+.-. ..--..+++....--++.++ .+-+..+........
T Consensus 93 ~~~~l~~~~~l~af~sAtqDIA~Da~~ie~l~~~e~g~~n~~~v~Gyr~g~ligGg~~l~l~~~~~gW~~~~~~la~l~l 172 (402)
T PRK11902 93 ALWPLALLAVLVAFLSASQDIVFDAYSTDVLRPEERGAGAAVKVLGYRLAMLVSGGLALILADRVLGWGNTYLLMAGLML 172 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999999999999999999899998559988999999999999999999899999999988869999999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCHH
Q ss_conf 9999999998421001465234555531010134457876---55579999999999999999999999999-8640989
Q gi|254780323|r 104 SFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYL---AGKWSFALFYVFAELWGAVMINLMFWQFA-NRITKTE 179 (491)
Q Consensus 104 ~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~w~~~~fYv~~e~~~~~vis~~FW~~~-n~~f~~~ 179 (491)
... ...+..|.++.-...+...+. ...+.++.+... .......++|-..|.....+.. -|. . .--++.+
T Consensus 173 l~~--~~~l~~~e~~~~~~~~~~~~~--~~~~~~~~f~~r~~~~~~l~fillyrlgd~~~~~m~~-pFl--l~dlG~s~~ 245 (402)
T PRK11902 173 AGA--LTTLWAPEPEVPARAPRSLGE--AVVGPLRDFFSRRGAWWLLLLIVLYKLGDAFAGSLST-TFL--IRGAGFSAG 245 (402)
T ss_pred HHH--HHHHHCCCCCCCCCCCHHHHH--HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH-HHH--HHHCCCCHH
T ss_conf 999--999928887754424103789--9999999999726799999999999989999999878-999--975299999
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 98999999998999-99999889999996301232248999999999999999999999840245223320000112345
Q gi|254780323|r 180 EATRFYATFGLVGN-VGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKL 258 (491)
Q Consensus 180 qaKRlf~li~~g~~-ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (491)
|=....+.++.+++ +|+.+||...+.+.. ...+....... ......+.+....
T Consensus 246 ~ig~~~~~~G~~a~i~G~~lGG~l~~r~g~----~~~L~~~~~~~---~l~~l~~~~la~~------------------- 299 (402)
T PRK11902 246 EVGIVNKTLGLAATIVGALAGGSLMVRLGL----YRSLMLFGVLQ---AVSNLGYWLLAVT------------------- 299 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH---HHHHHHHHHHHHC-------------------
T ss_conf 999998799999999999999999999738----99999999999---9999999999966-------------------
Q ss_pred CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78889999998309679999999999999999999999999998329989999999999999999999999997899997
Q gi|254780323|r 259 KLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKS 338 (491)
Q Consensus 259 ~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r 338 (491)
. .|.++ +...+...+++..+.-..+.....+.- +++.-+.-++.+.+..+....+.-.+++.+.++
T Consensus 300 ~-----------~~~~~--l~~~i~~~~~~~g~~~~a~~a~~m~l~-~~~~~atqyal~~sl~~l~~~~~~~~sG~la~~ 365 (402)
T PRK11902 300 P-----------KHLWL--MGLAIGVENLCGGMGTAAFVALLMALC-NRSFSATQYALLSALASVGRVYVGPTSGYLVEA 365 (402)
T ss_pred C-----------CCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7-----------75799--999999999999999999999999982-886639999999999999899988439999998
Q ss_pred HHHHHHHHHHH
Q ss_conf 31678999999
Q gi|254780323|r 339 FRWFTSAIITP 349 (491)
Q Consensus 339 ~G~~~~l~i~P 349 (491)
+||..--..+-
T Consensus 366 ~Gy~~fFi~~~ 376 (402)
T PRK11902 366 LGWPGFYLGTV 376 (402)
T ss_pred HCCHHHHHHHH
T ss_conf 19699999999
No 84
>pfam05631 DUF791 Protein of unknown function (DUF791). This family consists of several eukaryotic proteins of unknown function.
Probab=96.19 E-value=0.12 Score=30.85 Aligned_cols=224 Identities=13% Similarity=0.082 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999987788651-24854467999999999999999999999963389999999999999999999999842
Q gi|254780323|r 37 FLVLFNFSTLRPIKDSLVVP-HMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYP 115 (491)
Q Consensus 37 F~i~~~y~~lr~~rd~l~~~-~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p 115 (491)
.+..++=|+=-|---++--+ ..+.+.+..+++ .-+..+.++-.+.+.+.+|++|||.-......+++.-+. -..|
T Consensus 44 ~La~~aDWLQGPY~Y~LY~~yg~~~~~Ia~Lfv-~GF~Ss~~fgt~vG~laD~~GRk~~cl~yc~~y~lsClt---k~s~ 119 (354)
T pfam05631 44 SMMMAGDWLQGPYVYYLYSSYGFSKGDIGILFI-AGFGSSMLFGTIVGSLADKQGRKRACLTYCILYILSCIT---KHSP 119 (354)
T ss_pred HHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH---HHCC
T ss_conf 999998874065539989974998999999999-998889999988888887517406799999999999998---8646
Q ss_pred CCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH-HHHHH
Q ss_conf 10014652345555310101344578765557999999999999999999999999986409899899999999-89999
Q gi|254780323|r 116 YRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATFG-LVGNV 194 (491)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~-~g~~i 194 (491)
|-. ...+. .+...-..++.|-.-|.| .+. .. -..-++.+--.+.|..-. .|.++
T Consensus 120 ~~~--------vLllG----------RvLGGisTSLLFSaFESW---lV~-Eh---~~~gf~~~wL~~TFs~a~flgNgi 174 (354)
T pfam05631 120 NYK--------VLMIG----------RFLGGIATSLLFSAFESW---LIA-EH---NKRGFSDQWLSTTFSKAAFLGNGL 174 (354)
T ss_pred CCH--------HHHHH----------HHHHHHHHHHHHHHHHHH---HHH-HH---HHCCCCHHHHHHHHHHHHHHCCCH
T ss_conf 409--------99999----------886128988888889999---998-98---727998889999999999954309
Q ss_pred HHHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
Q ss_conf 99998899999963012322---489999999999999999999998402452233200001123457888999999830
Q gi|254780323|r 195 GLIFAGGIVKTFSKLTNELM---IYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALN 271 (491)
Q Consensus 195 g~i~gg~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~ 271 (491)
-++.+|.....+++..+..+ .......+.+++ ..+...+. +|..+. .++++.+.++.++.+.+.+
T Consensus 175 vAI~AGl~an~lv~~~~~gpvaPF~~A~~~L~i~~---~~i~~~W~------ENyG~~---s~~~~~~~~~~~a~~~i~~ 242 (354)
T pfam05631 175 VAIISGLFANLLADRFGFGPVAPFDAAACFLAIGM---AIILNTWS------ENYGDP---SDKKDLKEQFKVAAQAIAS 242 (354)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH---HHHHCCCH------HCCCCC---CCCCHHHHHHHHHHHHHHC
T ss_conf 99999999999998608898783699999999999---99974440------205997---6650267899999999972
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 967999999999999999999999999999
Q gi|254780323|r 272 SKYLGYLVLLVICYGTAINLVEGPWKEKVR 301 (491)
Q Consensus 272 s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~ 301 (491)
+|-+..+.+.--+++-+.-+.-+.|.-.+.
T Consensus 243 d~~il~LG~iQSLFEgsMYiFVFlWTPaL~ 272 (354)
T pfam05631 243 DPNVFCLGLVQSLFEGSMYTFVFLWTPALS 272 (354)
T ss_pred CHHHHHHHHHHHHHHHHHHHHEEEECCCCC
T ss_conf 801799999999988768750556436538
No 85
>KOG2532 consensus
Probab=96.15 E-value=0.12 Score=30.72 Aligned_cols=236 Identities=11% Similarity=0.061 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999633899999999999999999999998421001465234555531010134457876555799
Q gi|254780323|r 70 CVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSF 149 (491)
Q Consensus 70 ~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 149 (491)
......++...-.+++.+|++.|+++......- .+...+.|....... |
T Consensus 81 s~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~s-----a~~t~l~P~aa~~~~------------------------~-- 129 (466)
T KOG2532 81 SFFWGYILGQIPGGYLADKFGARRVFFISGLIS-----ALLTLLTPLAASIGF------------------------Y-- 129 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-----HHHHHHHHHHHHHCC------------------------H--
T ss_conf 999999999823799998918538899999999-----999999999998262------------------------2--
Q ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHH
Q ss_conf 9999999999999999999---99998640989989999999989999999988999999630-1232248999999999
Q gi|254780323|r 150 ALFYVFAELWGAVMINLMF---WQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKL-TNELMIYYSMLTLILS 225 (491)
Q Consensus 150 ~~fYv~~e~~~~~vis~~F---W~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~-~~~~~~~~~~~~~~~~ 225 (491)
+.+.+.+.--+.-+..| -+....=..++|..|+.++..+|.++|.+++-.....+.+. .|=....+.... .
T Consensus 130 --~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~---~ 204 (466)
T KOG2532 130 --LLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGI---V 204 (466)
T ss_pred --HHHHHHHHCCHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH---H
T ss_conf --87899997104676664403102010588888999999999998998999886489986257698779999879---9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCC------CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999998402452233200001------1234578889999998309679999999999999999999999999
Q gi|254780323|r 226 SILLMAVYRWMNLYVLTDPQQYSPKRGS------VKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEK 299 (491)
Q Consensus 226 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~ 299 (491)
+.....+..+.....+.++.....+|.+ .+++.+....-..+.+++||-+..+..-.+..+....++-...=.+
T Consensus 205 g~i~~~~w~~~~~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY 284 (466)
T KOG2532 205 GLIWFILWFLFYSDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTY 284 (466)
T ss_pred HHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHCCCHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_conf 89887765553148834279768999999982744000378899998999708499999999999889999999977199
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q ss_conf 9983299899999999999999999-999999978999973167
Q gi|254780323|r 300 VRQLYPTQNSYAQFMGQFIQWTGIV-TIVFMILGSNILKSFRWF 342 (491)
Q Consensus 300 ~~~~~~~~~~~~af~g~~~~~v~i~-tii~qll~~~ll~r~G~~ 342 (491)
.++...=+.+-+.+++-.-.....+ .++.-.++.++.+| ++.
T Consensus 285 ~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~-~ls 327 (466)
T KOG2532 285 LKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFR-ILS 327 (466)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCC
T ss_conf 9973287854546998769999999999999998898753-686
No 86
>PRK09528 lacY galactoside permease; Reviewed
Probab=96.08 E-value=0.13 Score=30.45 Aligned_cols=264 Identities=11% Similarity=0.061 Sum_probs=137.7
Q ss_pred HHHHHHHHHHCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf 9987788651248544679--99999999999999999999963389999999999999999999999842100146523
Q gi|254780323|r 47 RPIKDSLVVPHMGAEIISF--VKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSP 124 (491)
Q Consensus 47 r~~rd~l~~~~~g~e~lp~--l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~ 124 (491)
-|+-|++...........| .-+|+++-- .+...+-+++.+ .+++..+......... +.+..+.+-|.+... +..
T Consensus 123 ~pl~ds~~~~~s~~~~~~YG~iRlwGSiGf-avas~~~G~l~~-~~~~~~f~~~s~~~li-~~~ll~~~~~~~~~~-~~~ 198 (418)
T PRK09528 123 AGAIEAYIEKVSRNSGFEYGRARMFGSLGW-ALCAFFAGILFN-INPQINFWLGSGCALI-LAVLLFFAKPDAPST-ATV 198 (418)
T ss_pred CCHHHHHHHHHHHHCCCCCCHHHHHHHHHH-HHHHHHHHHHHH-CCCHHHHHHHHHHHHH-HHHHHHHHCCCCCCC-CCC
T ss_conf 638999999998775897624789999999-999999889876-1732899999999999-999999846765322-100
Q ss_pred HHHHHHHCCHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 455553101013445---7876555799999999999999999999999998640-989989999999989999999988
Q gi|254780323|r 125 ESIRALASSWPYLKW---FIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRIT-KTEEATRFYATFGLVGNVGLIFAG 200 (491)
Q Consensus 125 ~~~~~~~~~~~~~~~---~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f-~~~qaKRlf~li~~g~~ig~i~gg 200 (491)
..+......++..+. .....+.|...++.+.....-.+ ...+|..+-...+ +.+++.+.+|.....+.+.-+.-=
T Consensus 199 ~~~~~~~~~~~~~~~~~~llk~~~~~~f~l~~~~~~~~~~~-~d~~f~~f~~~~~~~~~~g~~~~G~l~s~gv~~Ei~~m 277 (418)
T PRK09528 199 ANAVGANPSAVSLKDALALFKLPKFWFLVLYVIGVACIYDV-FDQQFPNFFASFFATHEQGTRVFGYLNSFQVFLEALIM 277 (418)
T ss_pred CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 00001466887799999983674999999999999999999-99888899999977016671367699999999999999
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH
Q ss_conf 99999963012322489999999999999999999998402452233200001123457888999999830967999999
Q gi|254780323|r 201 GIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVL 280 (491)
Q Consensus 201 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~ 280 (491)
.....+.++.+....+........ +-+.... ...+|. .+..
T Consensus 278 ~~~~~l~~r~g~k~~Llla~~~~~-------lRw~~~~------------------------------~~~~~~--~i~~ 318 (418)
T PRK09528 278 FFAPLIINRIGAKNALLLAGTIMA-------VRIIGSA------------------------------FATNAL--EVSI 318 (418)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHH-------HHHHHHH------------------------------HCCCHH--HHHH
T ss_conf 999999986080999999999999-------9999863------------------------------001389--9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999983299899999999999999999999999978999973167899999999999
Q gi|254780323|r 281 LVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILI 354 (491)
Q Consensus 281 ~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li 354 (491)
.-++-++...+....-..++++.+|++.+-|++.=.+....++...+.+.+++++.+++|...+-.++-.+.++
T Consensus 319 ~qlLHa~tf~l~~~a~~~yI~~~~~~~l~aT~~~v~~~~~~gl~~~i~s~~~G~lyD~~G~~~~y~~~g~i~~~ 392 (418)
T PRK09528 319 LKLLHAFEVPFLLVGIFKYITSNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQDTYLVLGLIVLG 392 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999985888889999999999999999999742068899984457999999999999
No 87
>PRK09952 shikimate transporter; Provisional
Probab=95.93 E-value=0.15 Score=29.98 Aligned_cols=35 Identities=17% Similarity=0.164 Sum_probs=18.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97673657776788876466777999999999983
Q gi|254780323|r 416 DDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLF 450 (491)
Q Consensus 416 ~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~ 450 (491)
.+--..+.+.--=++++.+|.+++|...-.+....
T Consensus 369 ~ElFPt~vR~TG~g~~Ynig~~i~Gg~aP~i~~~L 403 (438)
T PRK09952 369 TEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAAL 403 (438)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98688605576899999999999999999999999
No 88
>TIGR00883 2A0106 MFS transporter, metabolite:H+ symporter (MHS) family protein; InterPro: IPR004736 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognized and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated . The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified . Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognized MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found . Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 prove to be a characteristic of virtually all of the more than 300 MFS proteins identified. This entry represents the metabolite-H(+) symport (MHS) subfamily of the MFS. Members include citrate-proton symporters , alpha-ketoglutarate permease , shikimate transporters , and the proline/betaine transporter ProP .; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=95.84 E-value=0.16 Score=29.71 Aligned_cols=355 Identities=15% Similarity=0.153 Sum_probs=175.1
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
Q ss_conf 788651248544679999999999999999----9999996338999999999999999999999984210014652345
Q gi|254780323|r 51 DSLVVPHMGAEIISFVKLWCVFPSAILFTI----LYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPES 126 (491)
Q Consensus 51 d~l~~~~~g~e~lp~l~~~~~l~~s~~~~~----~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~ 126 (491)
|+.|=.+.|+ .-+-+....++.+.++.-| +++++-||++|||.+-+++...+..=...++ .|..+-+= .+
T Consensus 21 ~~~Ffp~~dp-~~~~~~~~atFa~gFl~RP~Gg~~FG~~GDr~GRk~~L~~tl~~Mg~~T~~IGL--lPsY~~IG---~~ 94 (413)
T TIGR00883 21 NTFFFPSGDP-LVALLATFATFAVGFLARPLGGIVFGHFGDRIGRKKTLVITLLMMGIGTVLIGL--LPSYATIG---IW 94 (413)
T ss_pred HCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHH---HH
T ss_conf 0027898882-789999999999999998899999988632354699999999998576653122--47601177---89
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH-HH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 555310101344578765557999999999999999999999999986409899899-99-9999899999999889999
Q gi|254780323|r 127 IRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATR-FY-ATFGLVGNVGLIFAGGIVK 204 (491)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKR-lf-~li~~g~~ig~i~gg~~~~ 204 (491)
.=.+-......|+ +++..||-++-.|+ .|+ -.|.|| +| ..-..|..+|.+++...+.
T Consensus 95 APiLL~~~Rl~QG-fs~GGE~gGaa~~~------------------~E~--A~~gkRG~~gSf~~~g~~~G~llA~l~~~ 153 (413)
T TIGR00883 95 APILLLLARLIQG-FSLGGEWGGAALYL------------------VES--APPGKRGFYGSFQQVGAPVGLLLAALVVL 153 (413)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHH------------------HHH--HCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999843-56789999999999------------------975--00220378888999867899999999999
Q ss_pred HHHHHCCCCC-HHHHHHH-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCCHHHHHHHHHCCH--HHHHH
Q ss_conf 9963012322-4899999-9999999999999999840245223320000112--345788899999983096--79999
Q gi|254780323|r 205 TFSKLTNELM-IYYSMLT-LILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVK--KKLKLSVLESLRMALNSK--YLGYL 278 (491)
Q Consensus 205 ~l~~~~~~~~-~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~k~i~~s~--yL~~l 278 (491)
.++...+++. +.--.+= =.+.+..++.+.-+++.+..+.+..++.++++++ .+.+..+.|-++ +++ .+..+
T Consensus 154 ~~s~~~~~~~P~~~WGWRiPFl~s~~l~~~gL~lR~~L~Et~~f~~~~~~~~~~~~~~~~p~~~~~~---~~~~~~~~~~ 230 (413)
T TIGR00883 154 LLSYLLGDEAPLLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKHKTRTGKKRIPLAELLT---KHRKAFLLVL 230 (413)
T ss_pred HHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH---HCHHHHHHHH
T ss_conf 9999726652033103145899999999999998165645779999885212530376740999987---2229999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999998329989999999-------9999999999999999978999973167899999999
Q gi|254780323|r 279 VLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFM-------GQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLM 351 (491)
Q Consensus 279 ~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~-------g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~ 351 (491)
...+..+...+++.=|..+...+...-+|+-++-=+ -.....+++..++.|=+.+.+-+|+|=|......-+.
T Consensus 231 ~~~~~~~~~fY~~t~y~~~Y~~~~~~vsEAGYA~GLg~~~~~~~~~~~~~~i~~~~~~P~~G~LsDriGRR~~~i~~~~~ 310 (413)
T TIGR00883 231 GLVIATTTTFYLITTYLPTYLTTTLGVSEAGYALGLGLSANSALLVLMLSLILFFVVIPLSGALSDRIGRRRVLIIFTVL 310 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 99999899999999999998865167514568773268766899999999999999999999997553653999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHH
Q ss_conf 99999999999841012346667873002079999999999999998763446466877752269767365777678887
Q gi|254780323|r 352 ILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIG 431 (491)
Q Consensus 352 ~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~ 431 (491)
..+...-++....-++ .++... +....+...+.-..-++...+..--+| |.+.|+.+-+.==-+.
T Consensus 311 ~~~~~~p~l~~l~~~~-----------y~~~~~-~~~~~~~~~~i~~~~~g~~~~~~~ElF---Pt~vR~~G~~l~y~~A 375 (413)
T TIGR00883 311 AALLAVPLLMALLDSG-----------YSPFTL-VFFLLLGLALIGGMYTGPMGSLLPELF---PTEVRYTGASLAYNLA 375 (413)
T ss_pred HHHHHHHHHHHHHCCC-----------CCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHH
T ss_conf 9999999999874178-----------768999-999999999999987876999877233---4407899887999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 6466777999999999983
Q gi|254780323|r 432 GRMAKSGGAVIQSFIFMLF 450 (491)
Q Consensus 432 ~r~Gk~~gs~~~~~l~~~~ 450 (491)
.=+|-+.+-.+...|....
T Consensus 376 ~~~~GG~aP~iA~~L~~~~ 394 (413)
T TIGR00883 376 GAIGGGLAPYIAAALVAIT 394 (413)
T ss_pred HHHHHHHHHHHHHHHHHHC
T ss_conf 9986568999999999721
No 89
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=95.83 E-value=0.16 Score=29.68 Aligned_cols=362 Identities=14% Similarity=0.121 Sum_probs=172.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 279999999999999999999987788651248-5446---799999999999999999999996338999999999999
Q gi|254780323|r 27 KKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMG-AEII---SFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFF 102 (491)
Q Consensus 27 ~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g-~e~l---p~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f 102 (491)
+++++++...|+-.++=...|.+=-.+....++ .+.. +.+-...++|. +++...=+++.+|++++++...+=..=
T Consensus 10 r~F~p~f~tqflgAfnDn~~K~~l~~~~~~~~~~~~~~~l~~l~~~lFiLPF-~Lfsa~aG~lADr~~K~~vir~~k~~E 88 (1150)
T PRK08633 10 GGFIPFLLIQFLNAFNDLGHKIIIQNTLIKAYDGSEAGILTAIVNALILLPF-LLFSSPAGFLADKFPKNRVIVIVALFE 88 (1150)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 3759999999980999999999999999998185135799999999999999-998642777423074889999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 9999999999842100146523455553101013445787655579-999999999999999999999999864098998
Q gi|254780323|r 103 VSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWS-FALFYVFAELWGAVMINLMFWQFANRITKTEEA 181 (491)
Q Consensus 103 ~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~-~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qa 181 (491)
+..-++-...++ .-+.|. +...+++ .+-+.+- +=.=.+..-|....+|=
T Consensus 89 i~im~l~~~~~~----------------------------~~~~~~l~~~lflm-g~qSa~f-gPaKYgiLpe~l~~~eL 138 (1150)
T PRK08633 89 VGLTLLIVAGYY----------------------------LGWFWLAFAATFLL-GAQSAIY-SPAKYGIIKELVGKENL 138 (1150)
T ss_pred HHHHHHHHHHHH----------------------------HHHHHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHCCCCCC
T ss_conf 999999999999----------------------------72299999999999-9999876-17999888876792205
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CCC
Q ss_conf 9999999989999999988999999630123----22489999999999999999999998402452233200001-123
Q gi|254780323|r 182 TRFYATFGLVGNVGLIFAGGIVKTFSKLTNE----LMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGS-VKK 256 (491)
Q Consensus 182 KRlf~li~~g~~ig~i~gg~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~ 256 (491)
-+--|++-++.-++.++|-.....+.+.... ..............+.+..+.......++..+...+..+.. +.+
T Consensus 139 ~~aNglve~~Tf~AIL~Gti~gg~l~~~~~~~~~~~~~~~~~~~~~~~l~~~Av~g~~~s~~IP~~~~~~p~~~~~~n~~ 218 (1150)
T PRK08633 139 SRANGLIEAVTIVAILAGTALFSFLFESLYGYNQTSEILQRIAPLGIVLLAVALIELFFAFRLPKVPATAANRPLVFNPK 218 (1150)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
T ss_conf 27660999999999999999999999864355553102557899999999999999999820989988888883357826
Q ss_pred CC--CCCHHHHHHHHHCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHH-HHHHHHHHHHHHH
Q ss_conf 45--788899999983096799-99999999999999999999999998329-9899999999999-9999999999999
Q gi|254780323|r 257 KL--KLSVLESLRMALNSKYLG-YLVLLVICYGTAINLVEGPWKEKVRQLYP-TQNSYAQFMGQFI-QWTGIVTIVFMIL 331 (491)
Q Consensus 257 ~~--~~~~~~~~k~i~~s~yL~-~l~~~v~~~~~~~tl~e~~~k~~~~~~~~-~~~~~~af~g~~~-~~v~i~tii~qll 331 (491)
+. ....++.++.+.++|.++ ++......+.+.. .+-.++-..+++... +++..+.++--+. .-+++-+ ++
T Consensus 219 ~~~~~~~~~~~l~~~~~~~~l~~silgiSwFW~~ga-~~l~~~p~~~k~~Lg~~~~~~~~~Lla~~~iGI~~GS----~l 293 (1150)
T PRK08633 219 DYLRGSLLIENLKLLRHDRNLWLAIIGLSYFWFVSQ-LLLANFPAYGKEELGLDNTFQVQYLLAASAIGIGIGS----LL 293 (1150)
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH----HH
T ss_conf 877467799999999859388999999999999999-9999889999998389808999999999999999999----99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78999973167899999999999999999998410123466678730020799999999999999987634464668777
Q gi|254780323|r 332 GSNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMA 411 (491)
Q Consensus 332 ~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l 411 (491)
++++-++. .-+.+.|+..+..++..+.+...... +... ..-+....+.|. +.=|-.-.+
T Consensus 294 a~~ls~~~---ie~glvP~Ga~g~~l~~~~l~~~~~~--~~~~----~~l~~~G~~gGl------------fiVPL~A~i 352 (1150)
T PRK08633 294 AGRLSKRY---IELGIVPLGAFGMTLMLFLLPAASSL--PSVL----LLFFLFGFSGGL------------FIVPLNALI 352 (1150)
T ss_pred HHHHHCCC---EEECCHHHHHHHHHHHHHHHHHHHHH--HHHH----HHHHHHHHHHHH------------HHHHHHHHH
T ss_conf 99996796---64254588999999999999987658--9999----999999998677------------567789998
Q ss_pred HEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 52269767365777678887646677799999999
Q gi|254780323|r 412 FIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFI 446 (491)
Q Consensus 412 ~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l 446 (491)
-..-+++.|.+.-+.-.-+ +-++...++.+...+
T Consensus 353 Q~~a~~~~r~rviAanNi~-n~~~mv~~~~~~~~l 386 (1150)
T PRK08633 353 QFRAPEKELGEVLAANNFL-QNVGMLLFLGLTWLF 386 (1150)
T ss_pred HHHCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_conf 7418865523422898999-999999999999999
No 90
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=95.69 E-value=0.18 Score=29.28 Aligned_cols=145 Identities=10% Similarity=0.050 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHC-CHHHHHHHHH
Q ss_conf 279999999999999999999987-----78865124854467999999999999999999-9999633-8999999999
Q gi|254780323|r 27 KKFIPMTLMMFLVLFNFSTLRPIK-----DSLVVPHMGAEIISFVKLWCVFPSAILFTILY-MKLSNIL-ETEKLFYVVV 99 (491)
Q Consensus 27 ~~~~~~~~~~F~i~~~y~~lr~~r-----d~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y-~~l~~~~-~~~~l~~~~~ 99 (491)
|-+..++..-.|==++||-+|.+= |.+..+...+..+.-.+... .=++++. +++.+|+ +.+|.+.+-.
T Consensus 21 ~gl~~lf~tE~wERFsyYGmralL~lyl~~~Lg~s~~~A~~i~g~f~al-----vYl~pi~GG~lADr~LG~r~ti~~G~ 95 (500)
T PRK09584 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSAL-----VYGLVAIGGWLGDKVLGTKRVIMLGA 95 (500)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 1199999999999999999999999999988499888999999999999-----99999869999896104099999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHH--HHHHHHHHHHH
Q ss_conf 999999999999984210014652345555310101344578765557999999999999----999--99999999998
Q gi|254780323|r 100 SFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELW----GAV--MINLMFWQFAN 173 (491)
Q Consensus 100 ~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~----~~~--vis~~FW~~~n 173 (491)
+..++-+++.++ +. ..+ ..+|+-.-+. |.+ .+| ++..
T Consensus 96 il~~~G~~~La~---~~----------------~~~--------------~~~~~gL~lI~vG~G~~Kpnis----slvG 138 (500)
T PRK09584 96 IVLAIGYALVAW---SG----------------HDA--------------GIVYMGMAAIAVGNGLFKANPS----SLLS 138 (500)
T ss_pred HHHHHHHHHHHC---CC----------------CCH--------------HHHHHHHHHHHHCCCCCCCCHH----HHHH
T ss_conf 999998999972---35----------------637--------------8999999999955534676577----8887
Q ss_pred HHCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 6409899899--999999899999999889999996301232
Q gi|254780323|r 174 RITKTEEATR--FYATFGLVGNVGLIFAGGIVKTFSKLTNEL 213 (491)
Q Consensus 174 ~~f~~~qaKR--lf~li~~g~~ig~i~gg~~~~~l~~~~~~~ 213 (491)
+.++.++.|| -|.++..|-|+|+.+|+.++.++.+..+-.
T Consensus 139 ~lY~~~d~rrD~~FtiFYmgINiGafla~ll~g~l~~~~G~~ 180 (500)
T PRK09584 139 TCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWS 180 (500)
T ss_pred HCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_conf 605899633224422899999899999999999999873616
No 91
>PRK12382 hypothetical protein; Provisional
Probab=95.54 E-value=0.21 Score=28.87 Aligned_cols=73 Identities=12% Similarity=0.110 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999832998999999999999999999999999789999731678999999999999
Q gi|254780323|r 282 VICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILIT 355 (491)
Q Consensus 282 v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~ 355 (491)
.+++++......=.....+.+.. +++++.+-+|.++.....-..+--.+.+.+.+++|.+.+-.+.-++++++
T Consensus 309 ~~l~G~G~g~~~P~l~al~~~~~-~~~~rG~a~g~~~~~~dlG~~~Gp~~~G~va~~~G~~~~F~~~av~~l~~ 381 (393)
T PRK12382 309 AALTGAGCSLIFPALGVEVVKRV-PSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLG 381 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 99999999887888999999758-93310379999999999999999999999999749389999999999999
No 92
>PRK11010 ampG muropeptide transporter; Validated
Probab=95.48 E-value=0.22 Score=28.74 Aligned_cols=333 Identities=16% Similarity=0.205 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----HHHHH-HHHH
Q ss_conf 279999999999999999999987788651-2485446799999999999999999999996338-----99999-9999
Q gi|254780323|r 27 KKFIPMTLMMFLVLFNFSTLRPIKDSLVVP-HMGAEIISFVKLWCVFPSAILFTILYMKLSNILE-----TEKLF-YVVV 99 (491)
Q Consensus 27 ~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~-~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~-----~~~l~-~~~~ 99 (491)
||.+.+.+.-|.-+.-+.+.-..=..-.-+ ..+.+.|=+. .++.+|=++. .+.+-+.+|++ |||-- -.+=
T Consensus 12 ~r~~~~llLGFsSGLPl~L~~~tL~~WLr~~Gvsl~tIGlf-slv~lpYslK--FLWAPlvDr~~~P~LGrRRsWill~Q 88 (490)
T PRK11010 12 PRSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAYVFK--FLWSPLMDRYTPPFLGRRRGWLLATQ 88 (490)
T ss_pred CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHH-HHHHHHHHHH--HHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf 27999999998500419999979999998879988999999-9999999999--99887885647877873479999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 99999999999998421001465234555531010134457876555799999999999999999999999998640989
Q gi|254780323|r 100 SFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTE 179 (491)
Q Consensus 100 ~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~ 179 (491)
...++.....++ .+|.. +-|....+=+.+..++...= +..=++--|+.+++
T Consensus 89 ~~l~~~l~~ma~--------~~P~~--------------------~l~~~a~~allvAf~SATQD-IaiDAyRiE~l~~~ 139 (490)
T PRK11010 89 LLLLVAIAAMGF--------LEPGT--------------------QLRWMAALAVVIAFCSASQD-IVFDAWKTDVLPAE 139 (490)
T ss_pred HHHHHHHHHHHH--------CCHHH--------------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCHH
T ss_conf 999999999997--------59675--------------------79999999999999987789-99989999836861
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 989999999989999999988999999630-1232248999999999999999999999840245223320000112345
Q gi|254780323|r 180 EATRFYATFGLVGNVGLIFAGGIVKTFSKL-TNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKL 258 (491)
Q Consensus 180 qaKRlf~li~~g~~ig~i~gg~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (491)
|-...-+.-..|=-+|.+++|...-.+++. .+=...+.....+++.+.... ...++|+... +.++..
T Consensus 140 eqg~gaa~~v~GYRigmlvsGa~aL~lAd~~~gW~~~Y~~mA~lml~g~~~t--------l~~pEP~~~~----~~~~~l 207 (490)
T PRK11010 140 ERGAGAAISVLGYRLGMLVSGGLALWLADRWLGWQGMYWLMAALLIPCIIAT--------LLAPEPTDTI----PVPKTL 207 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH--------HHCCCCCCCC----CCHHHH
T ss_conf 3358999999999999999879999998762265999999999999999999--------8388865554----331379
Q ss_pred CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q ss_conf 7888999999830967999999999999999999999999-99983299899999999999999999-999999978999
Q gi|254780323|r 259 KLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKE-KVRQLYPTQNSYAQFMGQFIQWTGIV-TIVFMILGSNIL 336 (491)
Q Consensus 259 ~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~-~~~~~~~~~~~~~af~g~~~~~v~i~-tii~qll~~~ll 336 (491)
+..+.|.++..++-|-...+.+++++|-+.-++....-.. .+++..=+.+|.+..-+.+ |.. +++--++++.++
T Consensus 208 ~~avv~Pf~~Ff~R~~a~lIL~fI~lYKlgDa~~g~M~~pFyl~dlGFS~~eIa~v~K~~----Gl~atI~G~~lGG~li 283 (490)
T PRK11010 208 EQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTL----GLLATIVGALYGGILM 283 (490)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHH
T ss_conf 999999999999706899999999999967999999866887743288888999888589----9999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 973167899999999999999999998410123466678730---0207999---9999999999998763446466
Q gi|254780323|r 337 KSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIK---LVPLALA---VFLGSLQNVLSKATKYTMFDST 407 (491)
Q Consensus 337 ~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~---~~~l~~~---v~~~~i~~~~~k~~kYsl~~p~ 407 (491)
.|+|....+.+.-+...+...+|...+..++........... ...+... .+....++--..+++|++...-
T Consensus 284 ~R~Gl~raL~i~gilqalsNL~f~~LA~~g~~~~~l~~aI~~Enf~~G~gtaAfvAyLssL~n~~ftATQYALlSSl 360 (490)
T PRK11010 284 QRLSLFRALLIFGILQGASNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSAL 360 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 99729999999999999678999999970884899999999998887899999999999853832259999999999
No 93
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=95.45 E-value=0.22 Score=28.65 Aligned_cols=275 Identities=13% Similarity=0.030 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999877886512485446799999999999999999999996338999999999999999999999984210014
Q gi|254780323|r 41 FNFSTLRPIKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFL 120 (491)
Q Consensus 41 ~~y~~lr~~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~ 120 (491)
+.-|+.+.+.|..+....+....-+......+.. .+..|+-+..++..++||-+-.+.....+.+ .+.++-
T Consensus 38 fply~~~~~~~~g~~~~~~~a~~gy~~aia~lli-a~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~---~~~L~~----- 108 (438)
T COG2270 38 FPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLI-ALLAPILGTIADYPGPRKKFFGFFTAIGIIS---TFLLWF----- 108 (438)
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH---HHHHHH-----
T ss_conf 5799999985058887422559999989999999-9999886466515787205889999999999---999998-----
Q ss_pred CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 65234555531010134457876555799999999999999999999999998640989989999999989999999988
Q gi|254780323|r 121 HPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAG 200 (491)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg 200 (491)
.+++ -.-|..-++|+.+.+=..... +.+-+++-|.++.++.+|.=++=-+-|-+|..+-=
T Consensus 109 ------------i~~~-------s~~~~~l~~~il~~i~~~~s~-Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~l 168 (438)
T COG2270 109 ------------IPPG-------SYLLLLLLFLILASIGFEFSN-VFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILL 168 (438)
T ss_pred ------------HCCC-------CHHHHHHHHHHHHHHHCCHHH-EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf ------------0898-------659999999999987300233-00666765405756557402335013643220999
Q ss_pred HHHHHHHHH---CC----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 999999630---12----------32248999999999999999999999840245223320000112345788899999
Q gi|254780323|r 201 GIVKTFSKL---TN----------ELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLR 267 (491)
Q Consensus 201 ~~~~~l~~~---~~----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 267 (491)
.......-. .+ .+........ .+++.-......-+-.+....+...++..+.- .+.-...++++|
T Consensus 169 i~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~-~l~A~W~li~~iPm~~~v~~~~~~~~~~~~~l-~~g~k~L~~t~k 246 (438)
T COG2270 169 IFVVLGFALGQQTGITIILLGLPPADGEDVRITG-LLAALWWLLFALPMILNVHDAEKISSPPPTAL-RNGFKELKSTFK 246 (438)
T ss_pred HHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHH-HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH-HHHHHHHHHHHH
T ss_conf 9999999606544605776236755564321577-89999999998088851665122456541789-999999999999
Q ss_pred HHHCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98309679-99999999999999999999999999832998999999999999999999999999789999731678999
Q gi|254780323|r 268 MALNSKYL-GYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAI 346 (491)
Q Consensus 268 ~i~~s~yL-~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~ 346 (491)
.+.+.+-+ +.+....+...-+.+++-+-=.....+..-++.| +..+....++..+..-++.+++-+|+|++.++.
T Consensus 247 ~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~----lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~ 322 (438)
T COG2270 247 EIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTE----LLLIGIALSVVAALGAIIAGFLDERFGSKPVLM 322 (438)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEH
T ss_conf 9962464499999999998239999999999988872812889----999999999999988899999997708842604
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780323|r 347 ITPL 350 (491)
Q Consensus 347 i~Pi 350 (491)
+--+
T Consensus 323 ~~lv 326 (438)
T COG2270 323 IGLV 326 (438)
T ss_pred HHHH
T ss_conf 8999
No 94
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=95.41 E-value=0.23 Score=28.57 Aligned_cols=73 Identities=10% Similarity=0.084 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9767365777678887646677799999999998300002333799999999999999999999708999985349
Q gi|254780323|r 416 DDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVNQLSKEYTQLISKE 491 (491)
Q Consensus 416 ~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~~~~L~~~y~~~i~~~ 491 (491)
|++.-..+.++++.+++=.|-..++.+...+...++ -...-..+....++.+++-+..+..=.|+++|..+|+
T Consensus 377 p~~~~Gt~~G~~n~~g~lgGai~~~~~~G~l~d~~G---w~~~F~~l~~~~~~a~i~l~~~~~~e~r~~~~~~~~~ 449 (452)
T PRK11273 377 PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG---WDGGFMVMIGGSILAVILLIVVMIGEKRHHEELLQKR 449 (452)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 773678999998789998999998989999677547---7899999999999999999999977765158886222
No 95
>PRK11462 putative transporter; Provisional
Probab=95.35 E-value=0.24 Score=28.43 Aligned_cols=19 Identities=21% Similarity=0.434 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 67999999999999999999
Q gi|254780323|r 63 ISFVKLWCVFPSAILFTILY 82 (491)
Q Consensus 63 lp~l~~~~~l~~s~~~~~~y 82 (491)
.||+.. ..+|.++.....+
T Consensus 80 rP~il~-gaip~~l~~~llf 98 (460)
T PRK11462 80 RPWVLF-GALPFGIVCVLAY 98 (460)
T ss_pred CHHHHH-HHHHHHHHHHHHH
T ss_conf 667868-8899999999996
No 96
>TIGR00883 2A0106 MFS transporter, metabolite:H+ symporter (MHS) family protein; InterPro: IPR004736 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognized and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated . The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified . Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognized MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found . Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 prove to be a characteristic of virtually all of the more than 300 MFS proteins identified. This entry represents the metabolite-H(+) symport (MHS) subfamily of the MFS. Members include citrate-proton symporters , alpha-ketoglutarate permease , shikimate transporters , and the proline/betaine transporter ProP .; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=95.33 E-value=0.24 Score=28.36 Aligned_cols=80 Identities=10% Similarity=0.129 Sum_probs=43.2
Q ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------CCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6387811232799999999999999999999877886512-------------485446799999999999999999999
Q gi|254780323|r 18 FCAVKMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPH-------------MGAEIISFVKLWCVFPSAILFTILYMK 84 (491)
Q Consensus 18 ~~~i~~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~-------------~g~e~lp~l~~~~~l~~s~~~~~~y~~ 84 (491)
+..+.++.+|.++.-.....+....+|+.-..--+...+. ..++..-.+-+ .+.....+..|++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~fY~~t~y~~~Y~~~~~~vsEAGYA~GLg~~~~~~~~~~~-~~~i~~~~~~P~~G~ 293 (413)
T TIGR00883 215 LAELLTKHRKAFLLVLGLVIATTTTFYLITTYLPTYLTTTLGVSEAGYALGLGLSANSALLVLM-LSLILFFVVIPLSGA 293 (413)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_conf 9999872229999999999998999999999999988651675145687732687668999999-999999999999999
Q ss_pred HHHHCCHHHHHHHH
Q ss_conf 99633899999999
Q gi|254780323|r 85 LSNILETEKLFYVV 98 (491)
Q Consensus 85 l~~~~~~~~l~~~~ 98 (491)
++||++||+.....
T Consensus 294 LsDriGRR~~~i~~ 307 (413)
T TIGR00883 294 LSDRIGRRRVLIIF 307 (413)
T ss_pred HHHHHCCHHHHHHH
T ss_conf 97553653999999
No 97
>PRK03545 sugar efflux transporter; Provisional
Probab=95.30 E-value=0.24 Score=28.30 Aligned_cols=262 Identities=16% Similarity=0.145 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------------------CCHHH----HHHHHHHHHHHHHHH
Q ss_conf 11232799999999999999999999877886512---------------------48544----679999999999999
Q gi|254780323|r 23 MSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPH---------------------MGAEI----ISFVKLWCVFPSAIL 77 (491)
Q Consensus 23 ~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~---------------------~g~e~----lp~l~~~~~l~~s~~ 77 (491)
+-++|+++...+..|.+...-..+-|-=..+...+ ..+|. +-.......+ ..++
T Consensus 70 r~~Rr~~ll~~l~~f~~~~~l~a~a~s~~~Ll~~R~l~Gi~~a~~~~~a~a~~~~l~p~~~rg~a~g~v~~G~sl-g~vl 148 (390)
T PRK03545 70 QVERRKLLLGLFVLFIASHVLSGLAWSFTVLLISRIGIAFAHAVFWSITASLAIRVAPAGKKAQALSLLATGTAL-AMVL 148 (390)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-HHHH
T ss_conf 168499999999999999999999763999999999986103888888999999977855577899999999999-9999
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH--
Q ss_conf 999999999633899999999999999999999998421001465234555531010134457876555799999999--
Q gi|254780323|r 78 FTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVF-- 155 (491)
Q Consensus 78 ~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~-- 155 (491)
-.++=+++.+.++=|-.|......-.+...+. ....|+....++....... ...++......|..
T Consensus 149 G~plg~~l~~~~gWr~~F~~~~vl~~~~~l~~-~~~lP~~~~~~~~~~~~~~------------~~l~~~~ll~~~~~~~ 215 (390)
T PRK03545 149 GLPLGRVVGQALGWRTTFLAIGGVALITLLLL-IKLLPLLPSENSGSLKSLP------------LLFRRPALVSLYLLTV 215 (390)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-HHHCCCCCCCCCCCHHHHH------------HHHCCHHHHHHHHHHH
T ss_conf 76448999886280899999999999999999-9977888776776666799------------9972889999999999
Q ss_pred HHHHHHHHHHHHHHHH----HHH--HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999----986--4098998999999998999999998899999963012322489999999999999
Q gi|254780323|r 156 AELWGAVMINLMFWQF----ANR--ITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILL 229 (491)
Q Consensus 156 ~e~~~~~vis~~FW~~----~n~--~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 229 (491)
....+.+. .+++ ..| -++.+|..-.+-..+.++.+|..++|.... +.+...... .......+...
T Consensus 216 l~~~~~f~----~~~yi~p~l~~~~g~s~~~~~~~l~~~Gia~~~g~~~~grl~d----r~~~~~~~~-~~~ll~~~~~~ 286 (390)
T PRK03545 216 VVVTAHFT----AYSYIEPFVQNVAGLSANFATALLLLFGGAGIIGSVLFSRLGN----RHPSGFLLI-AIALLLVCLLL 286 (390)
T ss_pred HHHHHHHH----HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCCHHHHH-HHHHHHHHHHH
T ss_conf 99999999----9999999998705998889999999999999999999999988----421019999-99999999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 99999999840245223320000112345788899999983096799999999999999999999999999983299899
Q gi|254780323|r 230 MAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNS 309 (491)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~ 309 (491)
+.. -.+....+....++++.......-.....+.+..|+..
T Consensus 287 --l~~------------------------------------~~~~~~~~~~~~~l~g~~~~~~~~~~q~~~~~~ap~~~- 327 (390)
T PRK03545 287 --LLP------------------------------------AANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPDAT- 327 (390)
T ss_pred --HHH------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-
T ss_conf --999------------------------------------88789999999999999999878999999998788967-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999997899997316789999
Q gi|254780323|r 310 YAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAII 347 (491)
Q Consensus 310 ~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i 347 (491)
..-++.+....|+-.-+=-.+++.+..++|+.....+
T Consensus 328 -~~a~al~~s~~~lG~~lG~~lgG~~~~~~G~~~~~~~ 364 (390)
T PRK03545 328 -DVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYV 364 (390)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf -8999999999999999999999999982274689999
No 98
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=95.28 E-value=0.25 Score=28.26 Aligned_cols=43 Identities=12% Similarity=0.055 Sum_probs=15.1
Q ss_pred HHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68777522697673657776788876466777999999999983
Q gi|254780323|r 407 TKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLF 450 (491)
Q Consensus 407 ~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~ 450 (491)
+|-.+-.-+|++.-.+.=++. .+..|.+-..|-+.-...+...
T Consensus 362 SRSy~~~lvp~~k~~~fFgly-altgra~S~~gp~lv~v~t~iT 404 (438)
T COG2270 362 SRSYLARLVPKGKEGRFFGLY-ALTGRAASFLGPFLVAVITQIT 404 (438)
T ss_pred HHHHHHHHCCCCCCCCEEEHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999868985213131025-4411389999999999999871
No 99
>TIGR00898 2A0119 cation transport protein; InterPro: IPR004749 Organic cation transport proteins belong to this group. The protein from human is a sodium-dependent, high affinity carnitine transporter that also transports organic cations without the involvement of sodium. It is involved in the active cellular uptake of carnitine.; GO: 0015075 ion transmembrane transporter activity, 0006811 ion transport, 0016021 integral to membrane.
Probab=94.93 E-value=0.31 Score=27.54 Aligned_cols=336 Identities=11% Similarity=0.047 Sum_probs=179.3
Q ss_pred HHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf 9877886512---4854467999999999999999999999963389999999999999999999999842100146523
Q gi|254780323|r 48 PIKDSLVVPH---MGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSP 124 (491)
Q Consensus 48 ~~rd~l~~~~---~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~ 124 (491)
...++++.|. +..+..--+..-..+...++-..++++++||++||+.+-+.+..-++.=.+-++-
T Consensus 123 ~~~stiv~EW~LvC~~~~~~~L~~s~~~~G~L~Gs~~~G~lsDrfGRk~~L~~s~l~~~~~g~~~a~S------------ 190 (557)
T TIGR00898 123 TFSSTIVTEWDLVCEDAWKVDLTQSLFFVGVLLGSLVLGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS------------ 190 (557)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------
T ss_conf 44873588527430025776688999999999868888778635204899999999998878651275------------
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q ss_conf 455553101013445787655579999999999999999999999999864098998999999-9989999999988999
Q gi|254780323|r 125 ESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYAT-FGLVGNVGLIFAGGIV 203 (491)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~l-i~~g~~ig~i~gg~~~ 203 (491)
.+.+.+.+|-....+...=+.- .=..+..|.-..++-.+.--+ +...=++|.++=+.++
T Consensus 191 -------------------P~~~~~~vfR~L~G~~~~g~~~-~~~~L~~E~~~~~~R~~~~~lG~~~~~~~G~~~L~l~A 250 (557)
T TIGR00898 191 -------------------PNYTVFLVFRLLVGMGIAGIWV-VAVVLNTEFLPKKQRAIVGILGIQVFFSLGLLLLPLVA 250 (557)
T ss_pred -------------------HHHHHHHHHHHHHHHHHCCEEE-EEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHH
T ss_conf -------------------6899999999996131002025-77776775327366157661035888887699987788
Q ss_pred HHHHH--HCCCCCHHHHHHHHHHHHHHH-HHHH---HH-HH-----------HHCCCCCCC-----CCCCCC-----CCC
Q ss_conf 99963--012322489999999999999-9999---99-99-----------840245223-----320000-----112
Q gi|254780323|r 204 KTFSK--LTNELMIYYSMLTLILSSILL-MAVY---RW-MN-----------LYVLTDPQQ-----YSPKRG-----SVK 255 (491)
Q Consensus 204 ~~l~~--~~~~~~~~~~~~~~~~~~~~~-~~l~---~~-~~-----------~~~~~~~~~-----~~~~~~-----~~~ 255 (491)
...-+ ++. ..+..+...++..+.+ ..+- +| +. +++.+.+.. ..+.+. +++
T Consensus 251 Y~~~~SgWR~--L~l~~s~P~~~~~~~~rw~vpESpRWL~~~gr~~~A~~~L~~~A~~Ng~~~eg~~~~~~~~~~~~~~~ 328 (557)
T TIGR00898 251 YFIPDSGWRW--LQLAVSLPLFIFLLLSRWFVPESPRWLISQGRIEEALKILQRVAKINGKKEEGGKLPAEVLSLSLEKE 328 (557)
T ss_pred HHCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHH
T ss_conf 6537855899--99999988999999987771013125642485789999999985337861553326603330025666
Q ss_pred CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------HHH------HHHHHHH
Q ss_conf 345788899999983096799999999999999999999999999983299-------------899------9999999
Q gi|254780323|r 256 KKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPT-------------QNS------YAQFMGQ 316 (491)
Q Consensus 256 ~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~-------------~~~------~~af~g~ 316 (491)
...+.+.+.++..+++.|.++...++..+.-..+++.||-....+.+...| +.+ +.-|+..
T Consensus 329 ~~~~k~~~~~~~~L~rtp~lr~~tl~l~~~Wf~~~f~YyGL~l~~~~l~~n~D~C~~~~~~~~~~~~~C~~L~~~~Y~~~ 408 (557)
T TIGR00898 329 LSSKKAQKPSFLDLFRTPQLRKTTLILMMLWFTTAFSYYGLVLDLENLGGNGDVCSISLFKKAVEAKVCEYLSKEIYLDL 408 (557)
T ss_pred HHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHCCHHHHHHHHHH
T ss_conf 54220014321554068789999999999999988999877753211478744002310004410022211008999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999978999973167899999999999999999998410123466678730020799999999999999
Q gi|254780323|r 317 FIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLS 396 (491)
Q Consensus 317 ~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~ 396 (491)
.+.+.+-+...+++-.+++|+|++.+..+.-++..+..+..+..+ ..... .++.+ . +...++-
T Consensus 409 --~~~glve~Pa~~~~~l~i~~LgRr~~~a~~~~~ag~~~l~~~~~~---~~~~~-~~G~l-----~------t~L~~~g 471 (557)
T TIGR00898 409 --FISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVP---EELYF-YNGWL-----R------TALAVLG 471 (557)
T ss_pred --HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCC-CCHHH-----H------HHHHHHH
T ss_conf --999998889999889887621776799999999999999999863---12355-30699-----9------9999999
Q ss_pred HHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 987634464668777522697673657776788876466777
Q gi|254780323|r 397 KATKYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSG 438 (491)
Q Consensus 397 k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~ 438 (491)
+.....+.|+.|+=.++=+=+-.++.==|+++-.++-|
T Consensus 472 ----~~~~~~aF~~~ylyt~ELYPT~~Rn~G~g~~S~m~r~G 509 (557)
T TIGR00898 472 ----KAGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVG 509 (557)
T ss_pred ----HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf ----99888872542220565015899999999999999875
No 100
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=94.78 E-value=0.33 Score=27.25 Aligned_cols=120 Identities=7% Similarity=-0.101 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 999999999999999978999973167899-9999999999999999984101234666787300207999999999999
Q gi|254780323|r 316 QFIQWTGIVTIVFMILGSNILKSFRWFTSA-IITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNV 394 (491)
Q Consensus 316 ~~~~~v~i~tii~qll~~~ll~r~G~~~~l-~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~ 394 (491)
.++..+.+..+++-=+.+++-+|.|-+... .=.-+.+++.+.+|+.+..-... ... ....++.+ -.....
T Consensus 320 ~fqslNpl~IiilaPl~a~lw~~lg~~~~~p~KfaiG~~l~gl~F~vl~~~~~~--~~~--~g~vs~~W-----lv~~Y~ 390 (500)
T PRK09584 320 QYQALNPFWIMIGSPILAAIYNKMGDTLPMPHKFAIGMVLCSGAFLVLPLGAKF--AND--AGIVSVNW-----LIASYG 390 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH--CCC--CCCCCHHH-----HHHHHH
T ss_conf 998872799999899999999981777883699999999999999999999986--267--88406899-----999999
Q ss_pred HHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999876344646687775226976736577767888764667779999999
Q gi|254780323|r 395 LSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSF 445 (491)
Q Consensus 395 ~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~ 445 (491)
+.-..|-.+-..+-|+.+.--|++.+....+.- =+..-+|..+++.+...
T Consensus 391 l~tigEL~lSPvGLS~vtklAP~~~~s~mMG~w-fls~a~gn~lag~ia~~ 440 (500)
T PRK09584 391 LQSIGELMISGLGLAMVAQLVPQRLMGFIMGSW-FLTTAGAALIAGYVAGL 440 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_conf 999999997589999999878599999999999-99999999999999998
No 101
>KOG2504 consensus
Probab=94.66 E-value=0.35 Score=27.05 Aligned_cols=355 Identities=12% Similarity=0.038 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHH
Q ss_conf 44679999999999999999999999633899999999999999999999998421001465234555531010134457
Q gi|254780323|r 61 EIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWF 140 (491)
Q Consensus 61 e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (491)
+...|+-. +...+.....++-+.+.+|++.|...-.= ..+...++++-.+..
T Consensus 81 ~~~~~i~s-l~~~~~~~~gpl~s~l~~rfg~R~v~i~G-----~~v~~~g~~lssF~~---------------------- 132 (509)
T KOG2504 81 SQIAWIGS-LLLGVYLLAGPLVSALCNRFGCRTVMIAG-----GLVAALGLLLSSFAT---------------------- 132 (509)
T ss_pred HHHHHHHH-HHHHHHHHHCCHHHHHHHHCCCHHHHHHH-----HHHHHHHHHHHHHHH----------------------
T ss_conf 06889999-99999986240679988760744888778-----899998999998884----------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
Q ss_conf 8765557999999999999999999999---9999864098998999999998999999998899999963012322489
Q gi|254780323|r 141 IYLAGKWSFALFYVFAELWGAVMINLMF---WQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYY 217 (491)
Q Consensus 141 ~~~~~~w~~~~fYv~~e~~~~~vis~~F---W~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~ 217 (491)
+.| -+|+...+-+-+=.++.+ =...+..|..+.+ +--|+..+|+.+|.++=+.+.+.+.+..+-.....
T Consensus 133 ----~i~---~l~lt~gvi~G~G~g~~~~paiviv~~YF~kkR~-lA~Gia~~GsGvG~~~~~~l~~~l~~~~Gwr~~~l 204 (509)
T KOG2504 133 ----SLW---QLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRA-LATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALL 204 (509)
T ss_pred ----HHH---HHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHH-HHHHHEEECCCCEEEEHHHHHHHHHHHCCCHHHHH
T ss_conf ----799---9999999983352153311389988777675454-45420122476346756789999988708689999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHC------------------------CCC-CCCCCCC--------CCCCCCCCC-CCHH
Q ss_conf 99999999999999999999840------------------------245-2233200--------001123457-8889
Q gi|254780323|r 218 SMLTLILSSILLMAVYRWMNLYV------------------------LTD-PQQYSPK--------RGSVKKKLK-LSVL 263 (491)
Q Consensus 218 ~~~~~~~~~~~~~~l~~~~~~~~------------------------~~~-~~~~~~~--------~~~~~~~~~-~~~~ 263 (491)
......+.+..+...++-..... ... .+....+ ....+++.. .+-.
T Consensus 205 ~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (509)
T KOG2504 205 IFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQ 284 (509)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCC
T ss_conf 99999999999998307876566851444321320011033331110357778888766654405676068510015300
Q ss_pred HHH----HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999----9983096799999999999999999999999999983299899999999999999999999999978999973
Q gi|254780323|r 264 ESL----RMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSF 339 (491)
Q Consensus 264 ~~~----k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~ 339 (491)
... +.++++|--+.++.-..+..+....-.+....++.+.. .++..+++.-...++++++ -.++.+.+-.+.
T Consensus 285 ~~l~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g-~~~~~~a~l~sii~~~~i~---gRi~~G~laD~~ 360 (509)
T KOG2504 285 AFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLG-LSSNDAAFLLSIIGVSDII---GRIILGLLADKP 360 (509)
T ss_pred CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHCC-CCHHHHHHHHHHHHHHCCC---HHEEHHHHCCCC
T ss_conf 003202078861558999999999999987633444087785559-8478899999999875120---640126551676
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHH
Q ss_conf 16789999999999999999999841012346667873002079999999999999998763446466877752269767
Q gi|254780323|r 340 RWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEF 419 (491)
Q Consensus 340 G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~ 419 (491)
.+...-... +.+++.++.....+..... ...+.-.+...+....-.++..+...-+.-.-+-..
T Consensus 361 ~~~~~~~~~-~~l~~~gl~~~~~p~~~~~---------------~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~ 424 (509)
T KOG2504 361 GIRALVLFL-LTLLIAGLARLFLPFATTY---------------VGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSN 424 (509)
T ss_pred CCHHHHHHH-HHHHHHHHHHHHHHHCCCH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 301579899-9999999999988613578---------------999999999985244788756689998639875036
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3657776788876466777999999999983000023337999999999999999999
Q gi|254780323|r 420 RTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVV 477 (491)
Q Consensus 420 R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~~ 477 (491)
++-.-....+++.-.|.-+++.+ ... .+++...........+.....|+...
T Consensus 425 a~Gl~l~~~gi~~l~gpPiag~~----~d~--tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504 425 AYGLLLLFQGIGALVGPPIAGLL----YDI--TGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHC--CCCEEHHHHHCCHHHHHHHHHHHHHH
T ss_conf 99999999899987002134132----200--47730189870539999999999889
No 102
>KOG3098 consensus
Probab=94.45 E-value=0.39 Score=26.70 Aligned_cols=288 Identities=16% Similarity=0.200 Sum_probs=135.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 878112327999999999999999999998778865124--8544---------67999999999999999999999963
Q gi|254780323|r 20 AVKMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHM--GAEI---------ISFVKLWCVFPSAILFTILYMKLSNI 88 (491)
Q Consensus 20 ~i~~~E~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~--g~e~---------lp~l~~~~~l~~s~~~~~~y~~l~~~ 88 (491)
+.++.|...+..++.-+.|+..+|..-.-.-++++-+.. |++. ...++. .+.++-.+ -.-+++.
T Consensus 2 ~~~~~~~~~v~~lg~g~~~~f~~~~s~~fi~esvi~sv~~~~~g~i~~~aGy~~~aiiY~--~ftv~~l~---~psiv~~ 76 (461)
T KOG3098 2 SPRRFELLNVLMLGFGFLFLFTAYDSQGFIAESVIHSVHERGPGGISAYAGYYGQAIIYA--FFTVSCLF---APSIVNF 76 (461)
T ss_pred CCCCCHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH--HHHHHHHH---HHHHHHH
T ss_conf 720100221000203577776862026778889999998418887577752799999999--99999981---5889988
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 38999999999999999999999984210014652345555310101344578765557999999999999999999999
Q gi|254780323|r 89 LETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMF 168 (491)
Q Consensus 89 ~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~F 168 (491)
.+++-...+--..+..+-..| ++||+. .+|..+-+-|.=- + ++
T Consensus 77 i~~K~~lv~ga~~y~~f~~gf---l~~N~y--------------------------------~~yfssallG~Ga-a-ll 119 (461)
T KOG3098 77 LGPKWALVIGATCYAAFPLGF---LFPNSY--------------------------------YLYFSSALLGFGA-A-LL 119 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHCCHH--------------------------------HHHHHHHHHHHHH-H-HE
T ss_conf 607999999868999988778---740519--------------------------------9999889853148-7-65
Q ss_pred H----HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CHHH---------HH-HHHHHHHHHH-H
Q ss_conf 9----99986409899899999999899999999889999996301232---2489---------99-9999999999-9
Q gi|254780323|r 169 W----QFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNEL---MIYY---------SM-LTLILSSILL-M 230 (491)
Q Consensus 169 W----~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~---~~~~---------~~-~~~~~~~~~~-~ 230 (491)
| ++..+..+.++-.|--++.=+.+..+.++||............. .... .. ...++.+.++ .
T Consensus 120 w~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~ 199 (461)
T KOG3098 120 WTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAI 199 (461)
T ss_pred ECCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 52552443114876668787999999999889851275402467536655454302332100134558999999999998
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 99999998402452233200001123457888999999---830967999999999999999999999999999832998
Q gi|254780323|r 231 AVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRM---ALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQ 307 (491)
Q Consensus 231 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~---i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~ 307 (491)
....... ....|.+....+.++. +.++.+.+|. ..++|-++.++-+.+..++..++.--.+-....-.....
T Consensus 200 ~~l~~i~--~~~~p~~~~~~~~~~~---~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~ 274 (461)
T KOG3098 200 SVLSIIN--FDFLPSKDVVNCKSSS---ETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLG 274 (461)
T ss_pred HHHHHHH--EEECCCCCHHHHHHHC---CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
T ss_conf 9877662--1336763033304303---3319999999999865871999999999999999999862531510125414
Q ss_pred HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999----999789999731678999999999999
Q gi|254780323|r 308 NSYAQFMGQFIQWTGIVTIVF----MILGSNILKSFRWFTSAIITPLMILIT 355 (491)
Q Consensus 308 ~~~~af~g~~~~~v~i~tii~----qll~~~ll~r~G~~~~l~i~Pi~~li~ 355 (491)
..-+.+.+.....++...++. .++ ++-+|++|-..+..+.-++..+.
T Consensus 275 ~n~~~~~ai~~~~~g~g~v~~g~~~~~l-~~rir~fg~~~~~~~~~~~~~~~ 325 (461)
T KOG3098 275 SNTTYLIAIYSIGIGLGEVIGGLDFSIL-SKRIRGFGRKPTVLIGIIIHLIG 325 (461)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 7631699999999768999877879987-04654125573036788999999
No 103
>PRK03633 putative MFS family transporter protein; Provisional
Probab=94.45 E-value=0.39 Score=26.69 Aligned_cols=57 Identities=4% Similarity=-0.106 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999832998999999999999999999999999789999731678
Q gi|254780323|r 286 GTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFT 343 (491)
Q Consensus 286 ~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~ 343 (491)
+....-+|-.-..++.|.. +++|+.+--+.+...-++-+++==++.+..++.+|-..
T Consensus 296 G~~~~~lY~l~lA~~~d~~-~~~~~v~a~a~~~~~~~~Gsi~GP~~ag~~M~~~G~~~ 352 (381)
T PRK03633 296 GAAGFTLYPVAMAWACEKV-EHHQLVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNL 352 (381)
T ss_pred HHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 9998547999999986627-78889999999999998198872899999999858128
No 104
>PRK03699 hypothetical protein; Provisional
Probab=94.24 E-value=0.43 Score=26.38 Aligned_cols=274 Identities=15% Similarity=0.157 Sum_probs=138.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHH
Q ss_conf 279999999999999999999987788651248544----6799999999999999999999996-33899999999999
Q gi|254780323|r 27 KKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGAEI----ISFVKLWCVFPSAILFTILYMKLSN-ILETEKLFYVVVSF 101 (491)
Q Consensus 27 ~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e~----lp~l~~~~~l~~s~~~~~~y~~l~~-~~~~~~l~~~~~~~ 101 (491)
+....+...+|+.+.+.....+.-++++.+..+++. +.+....-.+ .+.+.-.+.+++.. ..+-+..+......
T Consensus 93 ~s~~~l~v~~fl~Glg~G~~~~~~~~~i~~~~~~~~r~~~l~~~~~~f~v-Ga~i~Pli~~~ll~~~~~W~~~y~~~~~~ 171 (394)
T PRK03699 93 HSLALFSIAMFVLGLVSGITMSIGTFLITHVYEGRQRGSRLLFTDSFFSM-AGMIFPIIAAYLLARSIEWYWVYLCIGLV 171 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 52999999999998678999988999999970600788999999999988-99999999999985699889999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--HCCH
Q ss_conf 9999999999984210014652345555310101344578765557999999999999-999999999999986--4098
Q gi|254780323|r 102 FVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELW-GAVMINLMFWQFANR--ITKT 178 (491)
Q Consensus 102 f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~-~~~vis~~FW~~~n~--~f~~ 178 (491)
..+.+......-+|..+.-+++.. +..... ++-..++--+....+|+.+|.= ++-.. +|+.| -.++
T Consensus 172 ~~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~----~~~~~~~~~~i~~f~yv~~e~~~~~W~p-----tyl~~~~g~~~ 240 (394)
T PRK03699 172 AVAIFILTLFSEFPALGKHAPKTE--APVVKS----KWNFGVIFLAIAALLYILAQLTFISWVP-----EYAQKKFGMSL 240 (394)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCC--CCHHHH----HCCHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHCCCCCH
T ss_conf 999999999825873222455332--320343----0260899999999999999999999999-----99998279998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 99899999999899999999889999996301232248999999999999999999999840245223320000112345
Q gi|254780323|r 179 EEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKL 258 (491)
Q Consensus 179 ~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (491)
+||......+-.+..+|-++++.+++.+....- . ......+...+. +. .
T Consensus 241 ~~A~~~~S~fw~~~~iGrl~~~~l~~r~~~~~~----l--~~~~~~a~~~~~-~~--~---------------------- 289 (394)
T PRK03699 241 EDAGNLVSNFWMAYMVGMWIFSFILRFFDLQRI----L--TVLAGLALVLMY-LF--V---------------------- 289 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H--HHHHHHHHHHHH-HH--H----------------------
T ss_conf 899999999999999999999999988437999----9--999999999999-99--9----------------------
Q ss_pred CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q ss_conf 788899999983096799999999999999999999999999983299899999999999999999-9999999789999
Q gi|254780323|r 259 KLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIV-TIVFMILGSNILK 337 (491)
Q Consensus 259 ~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~-tii~qll~~~ll~ 337 (491)
...++....+.. ...++...-++-..........|+..+. ..|. ....+.+ +.+.-.+++.+.+
T Consensus 290 ----------~~~~~~~~~~~~--~~~Gff~a~iyp~~~s~~~~~~~~~~~~--~vs~-il~~g~~G~~~~P~i~G~i~~ 354 (394)
T PRK03699 290 ----------TTDNPAHMAYLI--LGLGFFSSAIYTTIITLGSQQTKVASPK--LVNF-ILTCGTIGTMLSFVVTGPIVA 354 (394)
T ss_pred ----------HCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCCCHH--HHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_conf ----------758689999999--9999999778899999998755553187--9999-999998999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 731678999999999999999
Q gi|254780323|r 338 SFRWFTSAIITPLMILITGGG 358 (491)
Q Consensus 338 r~G~~~~l~i~Pi~~li~~~~ 358 (491)
++|++.+....|+...+..+.
T Consensus 355 ~~G~~~~~~~~~~~y~~~~~~ 375 (394)
T PRK03699 355 HFGLQAAMLTANGLYAVVFVM 375 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
T ss_conf 862899999999999999999
No 105
>pfam03209 PUCC PUCC protein. This protein is required for high-level transcription of the PUC operon.
Probab=94.22 E-value=0.43 Score=26.35 Aligned_cols=173 Identities=13% Similarity=0.075 Sum_probs=103.2
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999986409899899999999899999999889999996301232248999999999999999999999840245223
Q gi|254780323|r 167 MFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQ 246 (491)
Q Consensus 167 ~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 246 (491)
-+-+++.|..++|+-.|--+++-.---+|.++++.....+.+......+.-...........+..+..+ ..++
T Consensus 109 ~~lALlad~t~e~~R~~~v~i~w~Mli~G~ivtA~i~g~lL~~fs~~rLi~v~~~~a~i~~~l~~~A~w---g~E~---- 181 (402)
T pfam03209 109 VGLALATDLADEEDRPKVVGLMYVMLLVGIIVSAITVGWLLADFSPARLIQVIQGVALATMVLNVIALW---KQEA---- 181 (402)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---CCCC----
T ss_conf 899999853886566999999999999999999999999756469999999999999999999999983---5666----
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHH
Q ss_conf 32000011234578889999998309679999999999999999999999999998329-98999999999999999999
Q gi|254780323|r 247 YSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYP-TQNSYAQFMGQFIQWTGIVT 325 (491)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~-~~~~~~af~g~~~~~v~i~t 325 (491)
..++..+.+.+++.++.+..+.+.++|..+....++++..+....-|...--+..+.+. ++.|-|+.-+.. +.-+
T Consensus 182 r~~~~~~~~~~~~~~f~~a~~~~~~~p~ar~F~~fv~l~~la~~mQD~iLEPygg~VFGmsv~eTT~Lta~~----~~G~ 257 (402)
T pfam03209 182 RRPSRPREEPRPEPSFLEAWLLFVAEPQARRFLFFLGLGTLAFFMQDVLLEPYGGEVFGLTVGETTKLTAFF----AGGT 257 (402)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHH----HHHH
T ss_conf 775545677778965999999998398730027799999999984201247640256077865769999999----8899
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHH
Q ss_conf 999999789-9997316789999999
Q gi|254780323|r 326 IVFMILGSN-ILKSFRWFTSAIITPL 350 (491)
Q Consensus 326 ii~qll~~~-ll~r~G~~~~l~i~Pi 350 (491)
++-+.++++ +.++.+....+..-.+
T Consensus 258 L~G~~~~g~~l~~~~~~~~~a~~G~~ 283 (402)
T pfam03209 258 LVGFGLAGRVLSRGLDPFRMAGWGCA 283 (402)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 99999999998657775889999999
No 106
>PRK10207 inner membrane transporter YhiP; Provisional
Probab=93.33 E-value=0.61 Score=25.20 Aligned_cols=99 Identities=8% Similarity=0.008 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-------HHHHHHHHHH
Q ss_conf 999999876344646687775226976736577767888764667779999999999830000-------2333799999
Q gi|254780323|r 392 QNVLSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMAT-------FSSIVPYLAV 464 (491)
Q Consensus 392 ~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~-------~~~~~~~~~~ 464 (491)
...+.-..|-.+-..+.|+.+.--|++.+....+.-- +..-.|..+|+.+.+....--+..+ ..+.-..+++
T Consensus 385 ~Y~l~t~gEL~lSpvGLs~~tklAP~~~~~~mMg~w~-l~~a~g~~l~g~ia~~~~~~~~~~~~~~~~~~y~~~F~~l~~ 463 (490)
T PRK10207 385 VYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWF-LTQAAAFLLGGYVATFTAVPENITDPLQTLPIYTNVFGKIGL 463 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9999999999980999999999681999999999999-999999999999999853664555577777899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999999708999985349
Q gi|254780323|r 465 FFLCLMFIWIYVVNQLSKEYTQLISKE 491 (491)
Q Consensus 465 ~~i~i~~~Wi~~~~~L~~~y~~~i~~~ 491 (491)
+.++..++-+.....++|-=+...++|
T Consensus 464 ~~~~~~vil~~~~p~l~rlmh~~~~~~ 490 (490)
T PRK10207 464 VTLGVAVVMALMVPWLNRMINTPESHQ 490 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 999999999999999999846432379
No 107
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=93.15 E-value=0.64 Score=25.00 Aligned_cols=364 Identities=12% Similarity=0.104 Sum_probs=168.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 327999999999999999999998778865124----85--44-679999999999999999999999633899999999
Q gi|254780323|r 26 AKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHM----GA--EI-ISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVV 98 (491)
Q Consensus 26 ~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~----g~--e~-lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~ 98 (491)
-+++++++...|+=.++=++.|..=-.++.-.. +. +. ....-...++|. +++...=+++.+|++++++...+
T Consensus 11 ~rrF~p~f~tQflgAfNDN~~K~alv~li~~~~~~~~~~~~~~l~~la~alFiLPF-~Lfsa~aG~LADk~~K~~iir~~ 89 (1139)
T PRK06814 11 SRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALSKYGALLVTLANAVFILPF-FILSGLAGQLADKYDKAKLIKIL 89 (1139)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 26738999999980888899999999999987512567654699999999999999-99862165654516488999999
Q ss_pred HHHHH--HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHH
Q ss_conf 99999--999999999842100146523455553101013445787655579999999999999999999----999999
Q gi|254780323|r 99 VSFFV--SFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINL----MFWQFA 172 (491)
Q Consensus 99 ~~~f~--~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~----~FW~~~ 172 (491)
=..=+ ..+...++.+ .+..-..+-+|-.=+-|- .=.+..
T Consensus 90 K~~Ei~im~l~~~~~~~-----------------------------------~~~~~l~~~lflmg~qSa~FgP~KYgiL 134 (1139)
T PRK06814 90 KFAEIGIAALAIYGFHL-----------------------------------NSVPLLFAALGLFGIHSAFFGPIKYSIL 134 (1139)
T ss_pred HHHHHHHHHHHHHHHHH-----------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998-----------------------------------6599999999999999986608999887
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 86409899899999999899999999889999996301232248999999999999999999999840245223320000
Q gi|254780323|r 173 NRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRG 252 (491)
Q Consensus 173 n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 252 (491)
-|....+|=.+--|++.++.-++.++|-.....+....+ ... ... ..+.+..+.+.....++..+... +..
T Consensus 135 pe~l~~~eL~~gNglve~~Tf~AIL~Gti~gg~l~~~~~--~~~-~~~----~~~~~Av~g~~~s~~ip~~~~~~-p~~- 205 (1139)
T PRK06814 135 PDHLNKDELLGANALVEAGTFIAILLGTIIGGLYTISGN--FVI-LGY----SLMGIAVLGWLASLFIPKTGNAA-PDL- 205 (1139)
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CHH-HHH----HHHHHHHHHHHHHHHCCCCCCCC-CCC-
T ss_conf 986591215144339999999999999999999996586--389-999----99999999999995088999889-988-
Q ss_pred CCCCCCCCCHHHHHHHHHCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 11234578889999998309679-999999999999999999999999998329-9899999999999999999999999
Q gi|254780323|r 253 SVKKKLKLSVLESLRMALNSKYL-GYLVLLVICYGTAINLVEGPWKEKVRQLYP-TQNSYAQFMGQFIQWTGIVTIVFMI 330 (491)
Q Consensus 253 ~~~~~~~~~~~~~~k~i~~s~yL-~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~-~~~~~~af~g~~~~~v~i~tii~ql 330 (491)
+-+.+.-...++.++.+.++|.+ +++......+.+..+ +-.++-..+++... |++..+-+++.+..-+++-++++
T Consensus 206 ~~~~~~~~~~~~~l~~~~~~~~l~~ailgiSwFW~~ga~-~l~~~p~~~k~~l~~~~~~~~~lla~fsiGI~~GS~la-- 282 (1139)
T PRK06814 206 KIDRNIIRSTITLLKYAKADKRLWLAILGISWFWLIGAV-VLSQLPLLAKDTLGGDENVVTLFLAVFSIGIAVGSFLC-- 282 (1139)
T ss_pred CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH--
T ss_conf 534346899999999987391799999999999999999-99970999999818978899999999999999999999--
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97899997316789999999999999999999841012346------667873002079999999999999998763446
Q gi|254780323|r 331 LGSNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLP------FTEDVIKLVPLALAVFLGSLQNVLSKATKYTMF 404 (491)
Q Consensus 331 l~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~------~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~ 404 (491)
+++-++ +.-+.+.|+..+..++.-+-+........+ .....+. .+-.+-+.+..+.-.+ -.. -+.
T Consensus 283 --~~ls~~---~ie~glvp~Ga~g~~~~~~~L~~~~~~~~~~~~~~~~~~~f~~-~~~~~~~~~~l~~~g~-~gG--lfi 353 (1139)
T PRK06814 283 --SKLLEG---EITLLYVPIGALGMGIFGLDLAFASSSVPAEPTQLKSILVFLS-KRHGWRILIDLFFLAI-IGG--LYI 353 (1139)
T ss_pred --HHHHCC---CEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH-CCCHHHHHHHHHHHHH-HCC--EEE
T ss_conf --999479---8013300788999999999999871247788503657999971-6234999999999997-450--045
Q ss_pred HHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4668777522697673657776788876466777999999999
Q gi|254780323|r 405 DSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIF 447 (491)
Q Consensus 405 ~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~ 447 (491)
=|-.-++-..-+++.|.+.-+.-+ +.+-++...++++...+.
T Consensus 354 VPL~A~iQ~~a~~~~r~rviAanN-iln~~~Mv~~~~~~~~l~ 395 (1139)
T PRK06814 354 VPLFAALQAWANPAHRARVIAANN-VINAIFMVGGTIILAVLQ 395 (1139)
T ss_pred EEHHHHHHHHCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_conf 225899885288766678779999-999999999999999999
No 108
>TIGR00899 2A0120 sugar efflux transporter; InterPro: IPR004750 This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both Gram-negative and Gram-positive bacteria.; GO: 0015542 sugar efflux transmembrane transporter activity, 0008643 carbohydrate transport, 0016021 integral to membrane.
Probab=93.01 E-value=0.67 Score=24.86 Aligned_cols=346 Identities=10% Similarity=0.122 Sum_probs=195.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999987788651248--544679999999999999999999999633899999999999999999999
Q gi|254780323|r 33 TLMMFLVLFNFSTLRPIKDSLVVPHMG--AEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFA 110 (491)
Q Consensus 33 ~~~~F~i~~~y~~lr~~rd~l~~~~~g--~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~ 110 (491)
-+..|++..+....-|.=.-..-+... +-.+=|.++ ..-.+.+.+....++-+|+-+.||-.-..+..+++......
T Consensus 3 ~l~aFL~g~Agalq~PtLS~fL~~E~~~~p~~vG~f~t-~~ai~gi~vs~~la~~sD~~gdr~~Lil~cclla~l~~~lf 81 (377)
T TIGR00899 3 LLVAFLTGIAGALQTPTLSLFLSEEVRARPAMVGLFYT-GSAIVGILVSQLLATRSDKQGDRKKLILFCCLLAVLACLLF 81 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEHHHHH-HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 57889999999987689999998875028511114345-55899999999998611134771899999999999999999
Q ss_pred HHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH---HHHH
Q ss_conf 9984210014652345555310101344578765557999999999999999999999999986409899899---9999
Q gi|254780323|r 111 FLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATR---FYAT 187 (491)
Q Consensus 111 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKR---lf~l 187 (491)
. -|+ ++.+.-..=|..+.+++...-. -.+++-|.-+ +|++. +++.
T Consensus 82 A---~nr---------------------------~Y~~l~~~gVLLss~~sta~Pq-~faLarehad-~~gr~~vMFss~ 129 (377)
T TIGR00899 82 A---WNR---------------------------NYFVLLVLGVLLSSFASTANPQ-LFALAREHAD-RTGREAVMFSSV 129 (377)
T ss_pred H---HHC---------------------------CHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-HHCCCCHHHHHH
T ss_conf 9---850---------------------------0688999999999788675168-8999999866-522761278999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 99899999999889999996301232248999-99999999999999999984024522332000011234578889999
Q gi|254780323|r 188 FGLVGNVGLIFAGGIVKTFSKLTNELMIYYSM-LTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESL 266 (491)
Q Consensus 188 i~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (491)
+=+=.|+|-.+|+..+..++...+=.-+++.. ..+..++.++.. -.+.-+++....+.+.+.+...+-
T Consensus 130 ~Raq~SLawvigpp~a~~La~~~~F~vmf~~aa~~f~~~~~l~~~-------~LPs~~~~~~~~~~~~~~~g~~~~---- 198 (377)
T TIGR00899 130 LRAQISLAWVIGPPLAFALALGFGFTVMFLAAAVAFVLCGVLVWL-------LLPSVPRGAPGATTTLEVRGRLAR---- 198 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCCCCCCCCHHCCCCCCCCCCCC----
T ss_conf 999999999999999999874202899999999999999999998-------677310001001000014774323----
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99830967999999999999999999999999999832998999999999999999999999999789999731678999
Q gi|254780323|r 267 RMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAI 346 (491)
Q Consensus 267 k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~ 346 (491)
..-+.|...+.+....+..++.-..-| .+.|... |+..+..+ -...--.-+-.+.+.++.++|+|-+.-..
T Consensus 199 ---r~~rLLfv~~~Lmw~~n~ly~i~mpl~--li~EL~l-~~kl~G~~---~g~AAGlEiP~M~~Agy~~~R~Gkr~Lm~ 269 (377)
T TIGR00899 199 ---RDTRLLFVACTLMWGCNILYIINMPLF--LINELGL-PDKLAGLM---MGTAAGLEIPFMLLAGYLIKRLGKRRLML 269 (377)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHCC-CHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ---542799999999975047888522789--9986258-41899999---99976556479999778888875899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHH-HHHH
Q ss_conf 999999999999999984101234666787300207999999999999999876344646687775226976736-5777
Q gi|254780323|r 347 ITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRT-KGKA 425 (491)
Q Consensus 347 i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~-k~K~ 425 (491)
+ ..+.+..|+....+.+... ..-...+. ++.-=++--|.-=.-+..+-||.-. -+.+
T Consensus 270 ~----A~~~g~~fy~~~~~~~~~~-----~~~~lq~l-------------na~fiGi~~g~gmlYfqdLmP~~~gs~Att 327 (377)
T TIGR00899 270 L----AVVAGVAFYTGLLLANSLW-----ALLMLQLL-------------NAIFIGILAGIGMLYFQDLMPGRAGSAATT 327 (377)
T ss_pred H----HHHHHHHHHHHHHHCCHHH-----HHHHHHHH-------------HHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 9----9999999999998516289-----99999999-------------999999999889999986273144589999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 6788876466777999999999983000
Q gi|254780323|r 426 VVDVIGGRMAKSGGAVIQSFIFMLFPMA 453 (491)
Q Consensus 426 ~iD~~~~r~Gk~~gs~~~~~l~~~~~~~ 453 (491)
..--..+-.|--+++.++..+...+...
T Consensus 328 Ly~n~~~G~G~i~ag~v~G~~~e~W~~~ 355 (377)
T TIGR00899 328 LYTNTSRGVGWIIAGSVAGILAEIWSYH 355 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9987521389999998866988875579
No 109
>KOG0255 consensus
Probab=91.85 E-value=0.91 Score=23.81 Aligned_cols=101 Identities=15% Similarity=0.270 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999963389999999999999999999999842100146523455553101013445787655579999999
Q gi|254780323|r 75 AILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYV 154 (491)
Q Consensus 75 s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv 154 (491)
..+-..+++.+.++++|++++...+....++-...++. -+.|.+..+=.
T Consensus 131 ~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a-------------------------------~~~~~~~~~Rf 179 (521)
T KOG0255 131 VLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA-------------------------------PNYWMFLIFRF 179 (521)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------CHHHHHHHHHH
T ss_conf 99999999988774376069999999999988999973-------------------------------30999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999864098998999999998999999998899999963
Q gi|254780323|r 155 FAELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSK 208 (491)
Q Consensus 155 ~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~ 208 (491)
...+..+-..+. =+++..|.+.+++..+.-.+ ....-.++..+.....++.+
T Consensus 180 l~G~~~~~~~~~-~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~ 231 (521)
T KOG0255 180 LSGFFGSGPLTV-GFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR 231 (521)
T ss_pred HHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_conf 999863108999-99999852265576688999-87877999999999999987
No 110
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family; InterPro: IPR014090 RhtX from Sinorhizobium meliloti 1021 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes..
Probab=91.36 E-value=1 Score=23.44 Aligned_cols=175 Identities=14% Similarity=0.069 Sum_probs=104.8
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99998640989989999999989999999988999999630123224899999999999999999999984024522332
Q gi|254780323|r 169 WQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYS 248 (491)
Q Consensus 169 W~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 248 (491)
=+++.+.++-+.=-+....=.++=.+|-+.||..+-.+....+.-+-.+....+-+..++|.. ++.+....+++.
T Consensus 120 DG~A~~H~~G~~LA~~NAvQ~a~v~~G~~~GG~~~L~L~~~~G~R~~~L~~Ac~~L~~L~~~l---~l~~r~~~~~~a-- 194 (391)
T TIGR02718 120 DGMAAEHLNGRTLAKVNAVQIAGVMIGFFGGGAGTLVLIGKFGQRPAFLLLACVPLASLVCVL---WLKDRAVASPEA-- 194 (391)
T ss_pred CCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCCC--
T ss_conf 541435205744678888888557864420058999998641515999999998799999998---705777677887--
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00001123457888999999830967999999999999999999999999999832998999999999999999999999
Q gi|254780323|r 249 PKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVF 328 (491)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~ 328 (491)
...-..++-.++|-|.-..+..+.+.|........-.-|.+..+. .--++-.|......++.+.++
T Consensus 195 ----------p~~~~ASL~~F~rRP~a~~lLAlAL~~~~~~~~~~Gl~~~yL~Da----~~~~~~IG~l~~a~~~~~~~L 260 (391)
T TIGR02718 195 ----------PLARRASLLRFLRRPLALSLLALALLSAMTAVSGFGLSKLYLVDA----GWPLEAIGRLGMAGGLVTVLL 260 (391)
T ss_pred ----------CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHC----CCCHHHHCCHHHHHHHHHHHH
T ss_conf ----------424655688875256458999999999877554114102234002----432776310211589999999
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9-99789999731678999999999999999999984
Q gi|254780323|r 329 M-ILGSNILKSFRWFTSAIITPLMILITGGGFFVFVI 364 (491)
Q Consensus 329 q-ll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~ 364 (491)
= ..+.+++||.|...+....- .+-++..+..+..
T Consensus 261 G~~~~A~lvR~~GL~~~~~l~~--~l~G~~alL~f~~ 295 (391)
T TIGR02718 261 GCGGGALLVRRLGLWRTLILGV--GLAGSLALLWFAQ 295 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_conf 7679999999998999999998--9888999999998
No 111
>TIGR00711 efflux_EmrB drug resistance MFS transporter, drug:H+ antiporter-1 (14 Spanner) (DHA2) family; InterPro: IPR004638 This subfamily of drug efflux proteins, a part of the major facilitator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in Escherichia coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.; GO: 0006810 transport, 0016021 integral to membrane.
Probab=88.85 E-value=1.6 Score=21.96 Aligned_cols=355 Identities=13% Similarity=0.117 Sum_probs=179.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999877886512-48544679999999999999999999999633899999999999999999
Q gi|254780323|r 29 FIPMTLMMFLVLFNFSTLRPIKDSLVVPH-MGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFA 107 (491)
Q Consensus 29 ~~~~~~~~F~i~~~y~~lr~~rd~l~~~~-~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~ 107 (491)
..-+..-.|.-...-+++...-.++.-+- .+.+...|..+...++ .-..+|+-+|+.+|++.||+|-+-...|.+--.
T Consensus 4 ~~~l~~g~FMa~LD~Tiv~va~p~~~~~lg~s~~~~~Wv~TsY~~A-~a~~IPl~gwLa~R~G~r~lFl~~~~~Ft~~S~ 82 (501)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPTLAGDLGASLSQVQWVITSYMLA-NAIVIPLTGWLAKRFGTRKLFLISTLAFTLGSL 82 (501)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999877632114410023231467888-999998899999870844789999999999999
Q ss_pred HHHHHH------------HHCCCCCCCCHH---------------------HHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999998------------421001465234---------------------55553101013445787655579999999
Q gi|254780323|r 108 IFAFLL------------YPYRDFLHPSPE---------------------SIRALASSWPYLKWFIYLAGKWSFALFYV 154 (491)
Q Consensus 108 ~f~~~l------------~p~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~w~~~~fYv 154 (491)
+.+.-- =-..+.++|-.. .....+..+|-+.+++.-.-+| .++||+
T Consensus 83 ~Cg~A~nl~~lIifR~~QG~~gG~l~Pl~~~~l~~~~PP~~Rg~~~~~~Gl~v~~AP~~GP~LGGwI~e~~~W-rw~F~~ 161 (501)
T TIGR00711 83 LCGVANNLELLIIFRVIQGFGGGLLIPLSFSLLLNIYPPEKRGLAMAIWGLTVLVAPALGPTLGGWIIENYEW-RWIFYI 161 (501)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHHHHCCCC-HHEEEH
T ss_conf 9998520899999999988622048999999999747912158356421066874202353104688732622-220212
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCCCCHH-----HHHHHHHHHH
Q ss_conf 99999999999999999986409899899999999899999999889999996---301232248-----9999999999
Q gi|254780323|r 155 FAELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFS---KLTNELMIY-----YSMLTLILSS 226 (491)
Q Consensus 155 ~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~---~~~~~~~~~-----~~~~~~~~~~ 226 (491)
-+-+ |..++-+.|--+-+|--++++.+++ ..+|.++-......+- +..++.++. .........+
T Consensus 162 NvPi-G~~v~~~a~~~l~~d~~~~~~~~~~-------D~~G~~L~~~g~~~Ll~~ls~g~~~GW~~~~~il~~~i~~~~~ 233 (501)
T TIGR00711 162 NVPI-GIIVVVVALFILPEDREKEKASKNL-------DFLGLLLLSVGLGSLLYVLSEGQEEGWFDSNLILILSIVGLVA 233 (501)
T ss_pred HHHH-HHHHHHHHHHHHCCCCCCHHHHHHH-------HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 5789-9999999999844666661666311-------2788999999999999875215668899863156999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999840245223320000112345788899999983096799999999999999999999999999983299
Q gi|254780323|r 227 ILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPT 306 (491)
Q Consensus 227 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~ 306 (491)
++...+ +.+...+++--|. + ++|+|-. .++ .+.+..+..+..|.=...+=...++
T Consensus 234 ~~~fv~----~sel~~~nP~~D~-----------------~-~F~~~~F-t~~--f~~~~~~~~~~lyg~~~LLP~~Lq~ 288 (501)
T TIGR00711 234 IIAFVV----RSELTDDNPLVDL-----------------R-LFKYRNF-TIG--FCVYSLLLGLGLYGAVYLLPLYLQQ 288 (501)
T ss_pred HHHHHH----HHHHCCCCCCCCH-----------------H-HHCHHHH-HHH--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999----7874146880044-----------------3-4020257-889--9999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCHHH
Q ss_conf 899999999999999-9999999999789-99973167899999999999999999998-41012346667873002079
Q gi|254780323|r 307 QNSYAQFMGQFIQWT-GIVTIVFMILGSN-ILKSFRWFTSAIITPLMILITGGGFFVFV-IFEDALLPFTEDVIKLVPLA 383 (491)
Q Consensus 307 ~~~~~af~g~~~~~v-~i~tii~qll~~~-ll~r~G~~~~l~i~Pi~~li~~~~ff~~~-~~~~~~~~~~~~~~~~~~l~ 383 (491)
-.++++..+...... ++..++..=+.++ +..|.|.|..+.+-=.+.+ .+++..+ -+++...+ ... .
T Consensus 289 ~~~~~~~~~Gl~~~P~gl~~~l~sPIaG~~~~~k~~~R~l~~ig~~~~a---~~~y~~~~~~~~~~~f-~~~-------~ 357 (501)
T TIGR00711 289 VLGYTALQAGLHILPVGLAPLLSSPIAGRMLGDKIDPRLLVTIGLILYA---VGFYLRAFTLTPDTDF-LAI-------A 357 (501)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH---HHHHHHHHCCCCCCCC-HHH-------H
T ss_conf 6279978999999889999999707999998414680689999999999---9998885221557861-888-------8
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99-9999999999998763446466877752269767365777678887646677
Q gi|254780323|r 384 LA-VFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKS 437 (491)
Q Consensus 384 ~~-v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~ 437 (491)
+. ..+-.+.. =..+=|.....-..+|+|.-.++-+..+.. +..|-+
T Consensus 358 ~~G~~i~G~g~-------~~~fmP~~~~al~~Lp~~~~~~gs~L~n~~-R~~gGS 404 (501)
T TIGR00711 358 LPGQFIRGFGM-------GCFFMPLTTIALSKLPAEKVARGSSLSNFL-RQLGGS 404 (501)
T ss_pred HHHHHHHHHHH-------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-HHHHHH
T ss_conf 67799999999-------999987557776125235762268999999-998889
No 112
>TIGR00890 2A0111 Oxalate/Formate Antiporter; InterPro: IPR004741 Oxalate/formate antiporters and many, as yet, uncharacterised proteins belong to this group.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=88.75 E-value=1.6 Score=21.90 Aligned_cols=217 Identities=13% Similarity=0.119 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH--HHHHCCCCC
Q ss_conf 9998778865124854467---99999999999999999999996338999999999999999999999--984210014
Q gi|254780323|r 46 LRPIKDSLVVPHMGAEIIS---FVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAF--LLYPYRDFL 120 (491)
Q Consensus 46 lr~~rd~l~~~~~g~e~lp---~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~--~l~p~~~~~ 120 (491)
.-+++|.+-..- ++|-.+ ..+.... .+..+..++=+++.+|+++|..--.- ......|+ ...
T Consensus 26 ~~~l~~~l~~~~-~Pdm~~a~~~~ft~~~-~~~a~s~~~gG~~~d~fGpR~~~mlg-----gil~~~G~Gs~~~------ 92 (429)
T TIGR00890 26 APPLGRKLGVKM-YPDMVSAVAVSFTLLL-IVLAVSQPVGGKLADKFGPRLVAMLG-----GILLGLGFGSIFA------ 92 (429)
T ss_pred HHHHHHHCCCCC-CCCHHHHHHHHHHHHH-HHHHHHHHHCCEEECCCCCCHHHHHH-----HHHHHHHHHHHHH------
T ss_conf 578887507888-8622689999999999-99862222124221000663889999-----9999976889998------
Q ss_pred CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH--------HHHHHHH
Q ss_conf 65234555531010134457876555799999999999999999999999998640989989999--------9999899
Q gi|254780323|r 121 HPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFY--------ATFGLVG 192 (491)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf--------~li~~g~ 192 (491)
+..+ -....|+.....+++=.++.+ +. ....|.|.| |++..|=
T Consensus 93 --------a~~~---------------s~~~LyL~~G~l~s~G~Gi~Y-g~-----al~tA~kWFPDk~GLA~G~~~~Gy 143 (429)
T TIGR00890 93 --------ALAD---------------SLAALYLTYGVLASAGVGIVY-GI-----ALSTAVKWFPDKRGLASGIIIGGY 143 (429)
T ss_pred --------HHHC---------------CHHHHHHHHHHHHHHHHHHHH-HH-----HHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf --------7502---------------189999998788779999999-98-----972031226553038999999986
Q ss_pred HHHHHHHHHHHHHHHH----HCCCC------CHHH-HHHHHHHHHHHHHHHHHHHHHHC--CCC---CCCCCCCCCCCC-
Q ss_conf 9999998899999963----01232------2489-99999999999999999999840--245---223320000112-
Q gi|254780323|r 193 NVGLIFAGGIVKTFSK----LTNEL------MIYY-SMLTLILSSILLMAVYRWMNLYV--LTD---PQQYSPKRGSVK- 255 (491)
Q Consensus 193 ~ig~i~gg~~~~~l~~----~~~~~------~~~~-~~~~~~~~~~~~~~l~~~~~~~~--~~~---~~~~~~~~~~~~- 255 (491)
.+|...-..+...+.+ +.++. ++.. ....++..++....+......-+ +++ |+.-+.++.++.
T Consensus 144 GlGs~~~~PL~~~~~~PldyrvndqGfftqedl~~~~~~aF~~~G~~~l~~i~~~a~~~~~P~~~WlPkG~~~E~~~~~~ 223 (429)
T TIGR00890 144 GLGSLVLSPLITSVLEPLDYRVNDQGFFTQEDLLEGVEAAFVYMGIVALLVIVLLAFLIKYPPGDWLPKGIHVEEEQEVK 223 (429)
T ss_pred HHHHHHHHHHHHHHCCCHHCEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCC
T ss_conf 47888630357763360210032564200455664579999999999999999999987078866676656520033134
Q ss_pred CCCCCCH-HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 3457888-999999830967999999999999999999999999999832
Q gi|254780323|r 256 KKLKLSV-LESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLY 304 (491)
Q Consensus 256 ~~~~~~~-~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~ 304 (491)
|+.+.+- .-.....+|.|.-+.|...-++.++..-.+--..|.+.++..
T Consensus 224 ~~~~~~~~d~~~~~~lr~~~fWvL~~~f~~~a~~~L~~~g~~~~yg~~L~ 273 (429)
T TIGR00890 224 KSIEVSEKDYTVAEMLRTPQFWVLYVSFFLAAVSGLLLIGLLKPYGRSLG 273 (429)
T ss_pred CCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 00230002331177642336999999999988899999999999888888
No 113
>KOG3764 consensus
Probab=87.21 E-value=1.9 Score=21.22 Aligned_cols=197 Identities=10% Similarity=0.073 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHH
Q ss_conf 67999999999999999999999963389999999999999999999999842100146523455553101013445787
Q gi|254780323|r 63 ISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIY 142 (491)
Q Consensus 63 lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (491)
+-.++..-++ +.+++++.++.+.+|.+.+--+.+=..+....=.+|++.= + .|.....+.++..
T Consensus 108 iG~LFaskA~-~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~---s---y~~l~vAR~LQgv--------- 171 (464)
T KOG3764 108 IGLLFASKAL-VQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN---S---YPMLFVARSLQGV--------- 171 (464)
T ss_pred HHHHHHHHHH-HHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC---H---HHHHHHHHHHHHH---------
T ss_conf 2378999999-9997454421567773564279999999999999998705---1---0789999998644---------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 65557999999999999999999999999986409899-89999999989999999988999999630123224899999
Q gi|254780323|r 143 LAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEE-ATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLT 221 (491)
Q Consensus 143 ~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~q-aKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~ 221 (491)
++-+ ..++ =-+..+|.|+.|. ..+--|.+-++.++|.++|+-....+-+..|...-.+....
T Consensus 172 ------gsA~---------~~ts--glamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~ 234 (464)
T KOG3764 172 ------GSAF---------ADTS--GLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAI 234 (464)
T ss_pred ------HHHH---------HHHH--HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHCCCCCCHHHHHH
T ss_conf ------3888---------8753--3899998715530444789999998750332158744005764487574899999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998402452233200001123457888999999830967999999999999999999999999999
Q gi|254780323|r 222 LILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVR 301 (491)
Q Consensus 222 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~ 301 (491)
+++.... ++..+.+ +.+.+++ ++.+... +..+++.||++..+.-+...+....+.|=....-..
T Consensus 235 v~Lld~~-------L~l~vi~-p~~~~~~----~~~~~~~----~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~ 298 (464)
T KOG3764 235 VLLLDGA-------LQLLVIE-PTEMDPD----STEQGTP----MWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWML 298 (464)
T ss_pred HHHHHHH-------HHHHEEC-CCCCCCC----CCCCCCC----HHHHHHCCHHHHHHCCHHHCCCHHHHHCCCCHHHHH
T ss_conf 9999999-------9986558-3346864----4666732----899884724755533022112108875751088999
Q ss_pred HHCCCHH
Q ss_conf 8329989
Q gi|254780323|r 302 QLYPTQN 308 (491)
Q Consensus 302 ~~~~~~~ 308 (491)
|....+.
T Consensus 299 e~m~~p~ 305 (464)
T KOG3764 299 ETMFTPG 305 (464)
T ss_pred HHCCCCC
T ss_conf 7616887
No 114
>TIGR00886 2A0108 nitrite transporter; InterPro: IPR004737 This family represents nitrate/nitrite antiporters in bacteria, fungi, algae and marine diatoms. Nitrate transporters in Escherichia coli are involved in excretion of nitrite produced by the dissimilatory reduction of nitrate. NarK is polytopic membrane protein with 12 transmembrane domains which is involved in nitrate uptake and nitrite excretion and is thought to function as a nitrate/nitrite antiporter. At low concentrations of nitrate, NarK mediates the electrogenic excretion of nitrite rather than nitrate/nitrite exchange. This process prevents intracellular accumulation of toxic levels of nitrite and allows further detoxification in the periplasm through the action of nitrite reductase . In the opportunistic fungal pathogen Aspergillus fumigatus the nitrate transporter crnA clusters with nitrite reductase (niiA) and nitrate reductase (niaD). NiaD, niiA and crnA are induced by nitrate and repressed by ammonium at the transcriptional level . In Hebeloma cylindrosporum the nitrate transporter polypeptide (NRT2) is characterised by 12 transmembrane domains and presents both a long putative intracellular loop and a short C-terminal tail, two structural features which distinguish fungal high-affinity transporters from their plant homologues. Transcription is repressed by ammonium and strongly stimulated by nitrate but also by organic nitrogen or nitrogen deficiency. ; GO: 0015103 inorganic anion transmembrane transporter activity, 0015698 inorganic anion transport, 0016021 integral to membrane.
Probab=86.69 E-value=2 Score=21.02 Aligned_cols=299 Identities=10% Similarity=0.062 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHH-HHHHHHHH-----H--HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 9999999999999-99999998-----7--78865124854467999999999999999999999963389999999999
Q gi|254780323|r 29 FIPMTLMMFLVLF-NFSTLRPI-----K--DSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVS 100 (491)
Q Consensus 29 ~~~~~~~~F~i~~-~y~~lr~~-----r--d~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~ 100 (491)
.+.++..-|++.| .++..=|+ | |.+-+| ++++-.+-. +......++-.+|+-+.+++++|+.......
T Consensus 2 ~L~~S~~~F~lsF~~W~~~~~L~~~~~~G~~dl~Ls---~~Q~~~~~~-~p~~~g~~~R~~~G~l~d~~GpR~~~~~~~~ 77 (472)
T TIGR00886 2 NLFFSWFGFFLSFLVWFAFSPLAVQIIKGKDDLGLS---TAQLGNLVA-VPVLAGAVLRIILGFLVDKFGPRKTTTLSLL 77 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---HHHHHHHHH-HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 034578899999999999877786541576331479---999999999-9999999999998863477671899999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCC-HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 99999999999984210014652-34555531010134457876555799999999999999999999999998640989
Q gi|254780323|r 101 FFVSFFAIFAFLLYPYRDFLHPS-PESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTE 179 (491)
Q Consensus 101 ~f~~~~~~f~~~l~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~ 179 (491)
.-++-.+..+++-+ +|. +.+.-.+.+..-++.+ ++++.++ ..++.-|+++
T Consensus 78 ~~~IP~~~~~~~~~------~p~~s~~~L~~~rlf~Gi~G--------------------g~Fa~~~---~~~s~fFp~~ 128 (472)
T TIGR00886 78 LLAIPCLLAGLAVQ------DPSTSYSVLLLLRLFIGIAG--------------------GSFASCM---PWISFFFPKK 128 (472)
T ss_pred HHHHHHHHHHHHCC------CCCCCHHHHHHHHHHHHHHH--------------------HHHHHHH---HHHHCCCCCC
T ss_conf 99999999984126------89989999999999996755--------------------4688766---5663068822
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHC------CCC-------CH--HHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9899999999899999999889999---996301------232-------24--89999999999999999999998402
Q gi|254780323|r 180 EATRFYATFGLVGNVGLIFAGGIVK---TFSKLT------NEL-------MI--YYSMLTLILSSILLMAVYRWMNLYVL 241 (491)
Q Consensus 180 qaKRlf~li~~g~~ig~i~gg~~~~---~l~~~~------~~~-------~~--~~~~~~~~~~~~~~~~l~~~~~~~~~ 241 (491)
+-----|+-++.||.|.-+....+. .+.+.. +.. .. -+......+..+..........++..
T Consensus 129 ~~GtA~gl~aG~GN~G~~~~~~~~Pa~f~i~~~~~~~~f~G~p~~F~~~~~~g~~~~~~~~~i~~~~~~l~~~~~~~~~~ 208 (472)
T TIGR00886 129 IQGTALGLAAGWGNMGGGVAQFVMPALFAIIASLIKGAFGGLPQTFDAHLAWGWAFVIVPALILLLIALLIFFVVADTPP 208 (472)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 01467588614326789999999999999999862211278984011013650446769899999999999999986246
Q ss_pred CC-CCCCC-----------------CC--CCCCCCCCCCCH---------------------------------------
Q ss_conf 45-22332-----------------00--001123457888---------------------------------------
Q gi|254780323|r 242 TD-PQQYS-----------------PK--RGSVKKKLKLSV--------------------------------------- 262 (491)
Q Consensus 242 ~~-~~~~~-----------------~~--~~~~~~~~~~~~--------------------------------------- 262 (491)
.+ .+++. .+ ..+.+-+.+...
T Consensus 209 ~~ws~r~~~ARGl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 288 (472)
T TIGR00886 209 GKWSERHKSARGLEVTTLKDDYFLLIMNLPATAKLSVKSARLSKIAFLVAALKVVVEPLLGTEALATYNIWVLNAIIESL 288 (472)
T ss_pred CCCCCCCCCCCCCCCCCHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 76445776557754103354303201025777544520100367776775422321021213323344357778874155
Q ss_pred -HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q ss_conf -999999830967999999999999999999999999---9998329989999999999999999999999-99789999
Q gi|254780323|r 263 -LESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKE---KVRQLYPTQNSYAQFMGQFIQWTGIVTIVFM-ILGSNILK 337 (491)
Q Consensus 263 -~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~---~~~~~~~~~~~~~af~g~~~~~v~i~tii~q-ll~~~ll~ 337 (491)
....+.+++++....+++.....--+--=++..+-. ..+++|.-.+..+..++......|.++=..= .++.++=+
T Consensus 289 ~~~~~~~~~~~~~tW~~~l~Y~~tFGsflg~~s~~~~vfl~~~~~fg~~~~~aG~~a~~~~~~g~~~RP~GG~lsD~~gg 368 (472)
T TIGR00886 289 SLKEQLKVFRDKHTWILALLYSVTFGSFLGVSSIFAMVFLLFKDQFGLSKVQAGAYASLGGLLGLLARPLGGLLSDRLGG 368 (472)
T ss_pred CCCCHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 64327987436314777765652240699999999889987416799887339999999998988863766689987268
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 73167899999999999999999
Q gi|254780323|r 338 SFRWFTSAIITPLMILITGGGFF 360 (491)
Q Consensus 338 r~G~~~~l~i~Pi~~li~~~~ff 360 (491)
|+|-+.-...+-.+.+..+...+
T Consensus 369 ~~g~~ar~~~~~~~~~~~g~~~~ 391 (472)
T TIGR00886 369 RFGTRARKLLMSFLGVAMGAALV 391 (472)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 66824999999999999987655
No 115
>pfam06963 FPN1 Ferroportin1 (FPN1). This family represents a conserved region approximately 100 residues long within eukaryotic Ferroportin1 (FPN1), a protein that may play a role in iron export from the cell. This family may represent a number of transmembrane regions in Ferroportin1.
Probab=85.02 E-value=2.4 Score=20.43 Aligned_cols=153 Identities=10% Similarity=-0.000 Sum_probs=91.9
Q ss_pred CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88999999830967999999999999999999999999999832998999999999999999999999999789999731
Q gi|254780323|r 261 SVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFR 340 (491)
Q Consensus 261 ~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G 340 (491)
...++.|.-+++|-.+.=..+.++|-.+-.+ +...-.++..+.-++.. .|.+.+.-.+..+.--++.+++.+|+|
T Consensus 248 ~~~~~w~~Y~~q~VflaslalalLY~TVLsf-~~lmt~yL~~~G~s~~~----igi~Rg~~ai~Gi~~T~~~p~l~kriG 322 (433)
T pfam06963 248 TQKDGWREYVRQPVFLASFALSLLYFTVLSF-GTLMTAYLLHQGLSPSV----IGGMRGGSAVTGLAGTFAYPFLEKRIG 322 (433)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC-CHHHHHHHHHCCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9975499997281478889999999987467-28899999975998999----999999999999999998999998851
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHH
Q ss_conf 67899999999999999999998410123466678730020-79999999999999998763446466877752269767
Q gi|254780323|r 341 WFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVP-LALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEF 419 (491)
Q Consensus 341 ~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~-l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~ 419 (491)
...+-+.--..=.. ....-...++.+ .+| -......-....+.+|..=+++.-..-|+.-.-+|++.
T Consensus 323 l~rtGl~sl~~Q~~-~L~~~v~s~~~~-----------~s~~~~~s~~~l~~gi~lSRlGLW~fDL~~~ql~Qe~V~e~~ 390 (433)
T pfam06963 323 LLRTGLWSLWWQLS-CLALAVASVFLP-----------GSSMSALSAFLLFGGVALSRIGLWSFDLAVTQLLQEGIPESE 390 (433)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHCCC-----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 58877999999999-999999961117-----------997116899999999999986698889999999970288542
Q ss_pred HHHHHHHHHHH
Q ss_conf 36577767888
Q gi|254780323|r 420 RTKGKAVVDVI 430 (491)
Q Consensus 420 R~k~K~~iD~~ 430 (491)
|...-+.=+.+
T Consensus 391 Rg~v~gvq~Sl 401 (433)
T pfam06963 391 RNVVGGTQNSL 401 (433)
T ss_pred CCCCHHHHHHH
T ss_conf 55022899999
No 116
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter); InterPro: IPR005279 The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The PTR family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analysis of a number of recently discovered peptide transport proteins . This family consists of bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. .
Probab=84.30 E-value=2.6 Score=20.20 Aligned_cols=123 Identities=14% Similarity=0.200 Sum_probs=65.0
Q ss_pred HHHHHHCCHHHH-HHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCC
Q ss_conf 999864098998-999---9999989999999988999999630123224899999999999999999999-98402452
Q gi|254780323|r 170 QFANRITKTEEA-TRF---YATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWM-NLYVLTDP 244 (491)
Q Consensus 170 ~~~n~~f~~~qa-KRl---f~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~ 244 (491)
++..+.++.+|. .|. |.++..+=|+|+.+|+..+..+.+..+-.- .-.+...|+.+..+.... +++..++.
T Consensus 133 smvg~lYe~~d~rPrrDggFt~FYm~INiG~f~~pll~g~i~en~g~h~----gf~laaVGm~~gll~f~~gr~~l~P~~ 208 (501)
T TIGR00924 133 SMVGKLYERDDDRPRRDGGFTVFYMSINIGSFISPLLIGVIAENVGYHL----GFALAAVGMALGLLRFLLGRKNLRPDI 208 (501)
T ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH----HHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 9999851698998440221136788998999998887536765224267----888999999999999973024688886
Q ss_pred CCCCCCCCCCCC----CCCCCHHHHHH------HHHCCHHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 233200001123----45788899999------9830967999-9999999999999999999
Q gi|254780323|r 245 QQYSPKRGSVKK----KLKLSVLESLR------MALNSKYLGY-LVLLVICYGTAINLVEGPW 296 (491)
Q Consensus 245 ~~~~~~~~~~~~----~~~~~~~~~~k------~i~~s~yL~~-l~~~v~~~~~~~tl~e~~~ 296 (491)
...+..-.+.++ +.+.-++.++- ...++.|..+ |.+.....+++.-+.--..
T Consensus 209 ~~vP~pLsk~~~kt~~~~~~al~aalA~vf~~~~~~~~~~~~NWill~tv~LaVii~f~rl~~ 271 (501)
T TIGR00924 209 SSVPDPLSKVEEKTAAKLKLALLAALAVVFFAALLFLDVYIANWILLSTVLLAVIIFFLRLAT 271 (501)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 788798887663028999999999999999999986264023789999999999999999840
No 117
>TIGR00889 2A0110 nucleoside transporter; InterPro: IPR004740 This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease (NupG) and xanthosine permease (XapB) from Escherichia coli.; GO: 0005337 nucleoside transmembrane transporter activity, 0015858 nucleoside transport, 0016021 integral to membrane.
Probab=84.01 E-value=2.7 Score=20.11 Aligned_cols=367 Identities=14% Similarity=0.172 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999877886512-48544679999999999999999999999633899999999999999999
Q gi|254780323|r 29 FIPMTLMMFLVLFNFSTLRPIKDSLVVPH-MGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFA 107 (491)
Q Consensus 29 ~~~~~~~~F~i~~~y~~lr~~rd~l~~~~-~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~ 107 (491)
-+++++-+|+.+ ++-+ |+-.=+..+. +++..+=+.+..... ++++.=.+-+-..+|+=+-+=++.++-+-+...+
T Consensus 8 ~~msFl~~fiWG-sWlv--tLg~y~~~tl~F~ga~iG~vYss~gI-AAi~~P~l~GiiaDkwlsA~~vya~~~~~gA~~l 83 (435)
T TIGR00889 8 KVMSFLQYFIWG-SWLV--TLGSYLSKTLKFSGAEIGAVYSSTGI-AAILMPILLGIIADKWLSAQKVYAVCHLVGALLL 83 (435)
T ss_pred HHHHHHHHHHHH-HHHH--HHHHHHHHHCCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 799999999876-6898--77899866134455420377887789-9997278999884156519999999999999999
Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 99999842100146523455553101013445787655579999999999999999999999999864098998999999
Q gi|254780323|r 108 IFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYAT 187 (491)
Q Consensus 108 ~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~l 187 (491)
.++ +.+..+..+.+.+.+.+- .|.=...+-|++ -|-.+.|.=.|+ .|=||.
T Consensus 84 f~A------------------Aq~Ttp~~~F~v~L~ns~----ayMPTiaL~Nsi----sy~~l~~AGlD~---~~dFPp 134 (435)
T TIGR00889 84 FFA------------------AQVTTPAGMFLVLLVNSL----AYMPTIALTNSI----SYANLPNAGLDV---VTDFPP 134 (435)
T ss_pred HHH------------------HCCCCHHHHHHHHHHHHH----HHHHHHHHHHHH----HHHHHHHCCCCC---CCCCCC
T ss_conf 885------------------156888678999999997----751478889999----998554248854---137887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCCCHHHHH
Q ss_conf 99899999999889999996301232248999999999999999999999840245223320000-11234578889999
Q gi|254780323|r 188 FGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRG-SVKKKLKLSVLESL 266 (491)
Q Consensus 188 i~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 266 (491)
|=.-|++|-|.++..+..+.+..|..+.-.....+.+.+-....+.. +...-|+.+.++++ +++-+...+ .|.+
T Consensus 135 IRv~GTiGfI~am~avsllPqiLGYa~~els~~qLyI~ag~SalL~~----fal~LP~iPVak~~a~~s~~~~LG-LDAf 209 (435)
T TIGR00889 135 IRVMGTIGFIVAMWAVSLLPQILGYADLELSNLQLYITAGSSALLGV----FALTLPDIPVAKKKAKMSLKVLLG-LDAF 209 (435)
T ss_pred EEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH----HHHHCCCCCCCCCCCCCHHHHHHH-HHHH
T ss_conf 06850278999999997525663014777130378999999999999----998478989851003411788876-7898
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH---HHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998309679999999999999999999999999998329989999999---9999-999999999999978999973167
Q gi|254780323|r 267 RMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFM---GQFI-QWTGIVTIVFMILGSNILKSFRWF 342 (491)
Q Consensus 267 k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~---g~~~-~~v~i~tii~qll~~~ll~r~G~~ 342 (491)
.++|||-..--.++.++.+..-.+-+.-=...+.|--.||+=-.+|. +..- ++.+..-+...+=-|..++|+|++
T Consensus 210 -~Lfknkr~~iFF~fs~llga~L~i~n~FgN~fL~~~~~~P~FA~SF~vk~asi~ms~sQ~sE~~FiLtiPFFlkRfGIK 288 (435)
T TIGR00889 210 -ILFKNKRMAIFFLFSMLLGAELQITNIFGNGFLHEFGKDPEFADSFVVKNASILMSLSQFSEILFILTIPFFLKRFGIK 288 (435)
T ss_pred -HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -8750885467899999975688876530452101125788620112321328877488999999998522553134478
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHEECCHHHHH
Q ss_conf 89999999999999999999841012346667873002079999999999999998763446466877-75226976736
Q gi|254780323|r 343 TSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEM-AFIPLDDEFRT 421 (491)
Q Consensus 343 ~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~-l~~pl~~~~R~ 421 (491)
.++++- ++....-.+||.+ +....+.+...+ -|.+.+ -.+.|-+++.+--. +=...|+..|.
T Consensus 289 ~V~l~s-~Vaw~lRfgfF~Y---Gsdp~~fg~~LL---~Ls~iv----------yG~afDFfnisgsvfVek~v~~~iRa 351 (435)
T TIGR00889 289 KVLLLS-LVAWALRFGFFAY---GSDPEYFGYVLL---LLSMIV----------YGCAFDFFNISGSVFVEKEVPVAIRA 351 (435)
T ss_pred HHHHHH-HHHHHHHHHHEEE---CCCCCHHHHHHH---HHHHHH----------HHHHHHEEEEEEEEEECCCCCHHHHH
T ss_conf 999999-9999998765030---789854899999---999999----------86544103445789960027866667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 577767888764667779999999999830
Q gi|254780323|r 422 KGKAVVDVIGGRMAKSGGAVIQSFIFMLFP 451 (491)
Q Consensus 422 k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~ 451 (491)
-+|..+=..++-.|--.|+.+......-+.
T Consensus 352 sAQGl~~~~~~GfG~~lG~~lsG~~ve~~~ 381 (435)
T TIGR00889 352 SAQGLFLLMVNGFGSLLGYILSGVVVEKYF 381 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 888999999701777775445636664331
No 118
>TIGR00879 SP MFS transporter, sugar porter (SP) family; InterPro: IPR003663 The sugar transporters belong to a superfamily of membrane proteins responsible for the binding and transport of various carbohydrates, organic alcohols, and acids in a wide range of prokaryotic and eukaryotic organisms . These integral membrane proteins are predicted to comprise twelve membrane spanning domains. It is likely that the transporters have evolved from an ancient protein present in living organisms before the divergence into prokaryotes and eukaryotes . In mammals, these proteins are expressed in a number of organs . This family includes just the sugar transporters. ; GO: 0005351 sugar:hydrogen ion symporter activity, 0008643 carbohydrate transport, 0016020 membrane.
Probab=83.80 E-value=2.7 Score=20.05 Aligned_cols=240 Identities=16% Similarity=0.161 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999963389999999999999999999999842100146523455553101013445787655579999999
Q gi|254780323|r 75 AILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYV 154 (491)
Q Consensus 75 s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv 154 (491)
+..--..-+|+.++++|++-+-+..++|.+-.++-+..- ..+. .. ......+ +-.+
T Consensus 147 ~~~g~l~~g~~~~~~GRk~~l~~~~~~~v~g~~~~~~~~--------------~~~~-----~~--~~~~gR~---l~G~ 202 (572)
T TIGR00879 147 GFIGALFAGWLSDRFGRKKSLLIVALLFVIGAILMGAAA--------------TALS-----VE--MLIVGRV---LLGI 202 (572)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH--------------HCCH-----HH--HHHHHHH---HHHH
T ss_conf 999998755677753362688999999999999999753--------------1020-----58--8999999---9998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCC-CCCHH-HHHHHHHHHHHH
Q ss_conf 999999999999999999864098998999999998999999998899999963----012-32248-999999999999
Q gi|254780323|r 155 FAELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSK----LTN-ELMIY-YSMLTLILSSIL 228 (491)
Q Consensus 155 ~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~----~~~-~~~~~-~~~~~~~~~~~~ 228 (491)
-+.+.+.++.. |.+|+-.++=.+++-++....=++|.+++....+.+++ ... +..+. ......+-.++.
T Consensus 203 g~G~~s~~~P~-----Y~sE~AP~~lRG~~~~~~ql~~t~G~l~a~~~~~~~A~~~~~~~~~~~~w~~~~g~~~~~~~~~ 277 (572)
T TIGR00879 203 GVGIASALVPM-----YISEIAPKALRGALVSLYQLAITIGILVAYGFGYGLANSGTVSLNNTLGWRIPLGLQLIPAALL 277 (572)
T ss_pred HHHHHHHHHHH-----HHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 53189998999-----8973385655740125789999999999999999998766552123222215667778999999
Q ss_pred HHHHH------HHH--------------HHHCCCCCCCC---------CCCCCCCCCCCCCCHHHHHHHHHCCHH-HHHH
Q ss_conf 99999------999--------------98402452233---------200001123457888999999830967-9999
Q gi|254780323|r 229 LMAVY------RWM--------------NLYVLTDPQQY---------SPKRGSVKKKLKLSVLESLRMALNSKY-LGYL 278 (491)
Q Consensus 229 ~~~l~------~~~--------------~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~k~i~~s~y-L~~l 278 (491)
++.+. +|+ .+....++.+. +.+...++++.+.+ ++.++...++|+ .+.+
T Consensus 278 ~~~~~~~PeSPrwLv~k~~~~~~A~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~ 356 (572)
T TIGR00879 278 FLGLFFLPESPRWLVEKGKVEEFARKSLARLRGTSSEDKEILDELELIDIARSIEKEQVNQS-WGELFSLKRRKVERRRL 356 (572)
T ss_pred HHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHCCCCHHHHHHH
T ss_conf 99998731214667516765888899999754897424789999998876545656532543-14666217852468899
Q ss_pred HHHHHHH-----HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999-----999999999999999983299899999999999999999999999978999973167899999
Q gi|254780323|r 279 VLLVICY-----GTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIIT 348 (491)
Q Consensus 279 ~~~v~~~-----~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~ 348 (491)
..-+++. +-.+.+.||.=. +.++..-++.|..-...- +++.+.++.-+++-++++|+|=|..+++-
T Consensus 357 ~~g~~l~~~qQ~~GiN~~~YY~~~-if~~~G~~~~~~~~~~si---~~g~~n~~~T~~a~~~vd~~GRr~~l~~G 427 (572)
T TIGR00879 357 FLGVVLQAFQQFTGINAIMYYSPT-IFENAGVSTTDTAFLVSI---IVGAVNFIFTFVAIFLVDRFGRRPLLLIG 427 (572)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999998764314514510679-999717740235776678---99999999999999998443057889888
No 119
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=83.59 E-value=2.8 Score=19.99 Aligned_cols=240 Identities=8% Similarity=0.027 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf 99998778865124854467999999999999999999999963389999999999999999999999842100146523
Q gi|254780323|r 45 TLRPIKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSP 124 (491)
Q Consensus 45 ~lr~~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~ 124 (491)
++..++|.+-++.. ..-.+...-.+ +.-+..+.-+++.+|++.+|..-.-.....+-..+-.. .|
T Consensus 31 ll~~I~~dl~ls~~---~~GlLttlP~l-~fgl~s~~a~~larR~G~~r~l~~al~ll~~G~~lR~~--~~--------- 95 (393)
T PRK09705 31 LLPQLRQASGMSFS---VAALLTALPVV-TMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMREL--YP--------- 95 (393)
T ss_pred HHHHHHHHHCCCHH---HHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH--CC---------
T ss_conf 19999988199888---99999999999-99999887899999868088999999999999999984--34---------
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4555531010134457876555799999999999--99999999999999864098998999999998999999998899
Q gi|254780323|r 125 ESIRALASSWPYLKWFIYLAGKWSFALFYVFAEL--WGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGI 202 (491)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~--~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~ 202 (491)
....++...=+ -|.-+..++-=++.-+.| +++....-|+.+..-+.|+.+++..
T Consensus 96 -----------------------~~~~ll~gt~l~G~GIai~nvllP~~vk~~f-P~r~g~~tglY~~~m~~ga~l~~~l 151 (393)
T PRK09705 96 -----------------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRF-QQRTPLVMGLWSAALMGGGGLGAAI 151 (393)
T ss_pred -----------------------HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -----------------------3899999999999899886441099999772-3205899999999999999999999
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 99996301232248999999999999999999999840245223320000112345788899999983096799999999
Q gi|254780323|r 203 VKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLV 282 (491)
Q Consensus 203 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v 282 (491)
+..+.+..+. ...........++... +.++... .++++. .+++++... .+.|||.-..++.+.
T Consensus 152 ~~~l~~~~~~--Wr~al~~wai~allal-~~w~~~~--~~~~~~-----~~~~~~~~~-------~~~rs~~aW~l~~ff 214 (393)
T PRK09705 152 TPWLVQHSET--WYQTLAWWALPAVVAL-FAWWWQS--AREVAS-----SHKTTTTPV-------RVVFTPRAWTLGVYF 214 (393)
T ss_pred HHHHHHHCCC--HHHHHHHHHHHHHHHH-HHHHHHH--CCCCCC-----CCCCCCCCC-------CCCCCHHHHHHHHHH
T ss_conf 9999987277--8999999999999999-9999971--578777-----888887764-------411380799999999
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999-999983299899999999999999999999999978999973167899
Q gi|254780323|r 283 ICYGTAINLVEGPWK-EKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSA 345 (491)
Q Consensus 283 ~~~~~~~tl~e~~~k-~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l 345 (491)
-+.+.....+ ..|. .+..|..-++++-....+.+ +...+...++.+.+.|+.+-+..+
T Consensus 215 glqS~~~Y~~-~aWLP~il~~~G~s~~~AG~lls~~----~~~~~~~~l~~P~la~~~~~~~~l 273 (393)
T PRK09705 215 GLINGGYASL-IAWLPAFYIEIGASAQYSGSLLALM----TLGQAAGALLMPAMARHQDRRKLL 273 (393)
T ss_pred HHHHHHHHHH-HHHHHHHHHHCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 9999999999-9999999998699999999999999----999999999999997346740499
No 120
>TIGR00896 CynX cyanate transporter; InterPro: IPR004747 This family of proteins is involved in active transport of cyanate. The cyanate transporter (CynX) in Escherichia coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.; GO: 0005215 transporter activity, 0006810 transport, 0016021 integral to membrane.
Probab=82.95 E-value=2.9 Score=19.81 Aligned_cols=277 Identities=12% Similarity=0.077 Sum_probs=141.9
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CC
Q ss_conf 9999998778865124854467999999999999--99999999996338999999999999999999999984210-01
Q gi|254780323|r 43 FSTLRPIKDSLVVPHMGAEIISFVKLWCVFPSAI--LFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYR-DF 119 (491)
Q Consensus 43 y~~lr~~rd~l~~~~~g~e~lp~l~~~~~l~~s~--~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~-~~ 119 (491)
=-++..+||++-++..-+-- + .++|+-. ++.+.=.++.+|++.+|.+-..+..- ..|.++ | ..
T Consensus 20 gPLL~~~R~~lgmS~~~AGL---L---T~LP~L~fa~l~~~Ap~LarRfG~eR~v~~~Ll~i-----~aG~l~---R~~~ 85 (372)
T TIGR00896 20 GPLLEEVRSALGMSASVAGL---L---TALPVLCFAVLAPLAPKLARRFGEERSVLAGLLLI-----AAGILI---RESA 85 (372)
T ss_pred HHHHHHHHHHHCHHHHHHHH---H---HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-----HHHHHH---HCCC
T ss_conf 87899998773515888999---8---75789999988875458876625279999999999-----999998---3047
Q ss_pred CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 46523455553101013445787655579999999999999999999999999864098998999999998999999998
Q gi|254780323|r 120 LHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFA 199 (491)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~g 199 (491)
-++.. .+.+-. +-=+ |.=+..++-=+..=+.| +|+.-+..|+.+..=+.|+-++
T Consensus 86 ~~~~~-----------Lf~gta---------l~G~-----GIai~nVLlP~lIKR~F-p~~~g~m~GlYs~al~~gaaLa 139 (372)
T TIGR00896 86 PGTAL-----------LFAGTA---------LAGV-----GIAIINVLLPSLIKRDF-PERVGLMTGLYSMALALGAALA 139 (372)
T ss_pred CCHHH-----------HHHHHH---------HHHH-----HHHHHHHHHCCHHCCCC-CCCCHHHHHHHHHHHHHHHHHH
T ss_conf 73059-----------999999---------9998-----99997757030100214-5543046789999999887666
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-----CC-CCCCCCCCCHHHHHHHHHCCH
Q ss_conf 899999963012322489999999999999999999998402452233200-----00-112345788899999983096
Q gi|254780323|r 200 GGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPK-----RG-SVKKKLKLSVLESLRMALNSK 273 (491)
Q Consensus 200 g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~k~i~~s~ 273 (491)
+.++-++++..++. +.-......+.. ....+.++-+....+.++....+ .. ..||+.+. .-+.+.+||
T Consensus 140 aa~tVPL~~~~~g~-W~~~L~~W~~~a-llAll~W~PQ~r~~~a~~~~~~~APrPedGrsaekrael----~~~~i~rsp 213 (372)
T TIGR00896 140 AAATVPLAQALGGR-WQQALALWALLA-LLALLLWLPQVRRRKAANQTAKRAPRPEDGRSAEKRAEL----TPKRIWRSP 213 (372)
T ss_pred HCCCHHHHHCCCCC-HHHHHHHHHHHH-HHHHHHCCHHHCCCCCHHHCCCCCCCCCCCCCHHHHCCC----CCCCEEECC
T ss_conf 13324556246784-189999999999-999982020201421511026779788776403333015----765213150
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79999999999999999999999999998329989999999999999999999999997899997316789999999999
Q gi|254780323|r 274 YLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMIL 353 (491)
Q Consensus 274 yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~l 353 (491)
.=..+.++.-+.+..+-.+=--+-.+.++.--|+.+-....+ ...+.+..--|+.|++.+|.--...+.+ ++..
T Consensus 214 ~AW~vt~f~GL~s~~~Y~~igWlP~Ili~~G~sa~~AG~ll~----l~~~~~~~~~ll~P~~A~r~kdqR~i~~--~~~~ 287 (372)
T TIGR00896 214 LAWQVTVFFGLQSLLYYIVIGWLPAILISHGVSAATAGLLLA----LMQLAQLASALLIPLLASRVKDQRGIVV--VVAV 287 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH----HHHHHHHHHHHHHHHHHCCCCCHHHHHH--HHHH
T ss_conf 589999999899999999999999999863887756899999----9999987689998899704885699999--9999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999841012346
Q gi|254780323|r 354 ITGGGFFVFVIFEDALLP 371 (491)
Q Consensus 354 i~~~~ff~~~~~~~~~~~ 371 (491)
+.-.+++++.+..-....
T Consensus 288 ~~L~G~~Gl~~~P~~~~~ 305 (372)
T TIGR00896 288 LQLVGLCGLLFAPLHGLW 305 (372)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 999999999985045999
No 121
>KOG4686 consensus
Probab=82.52 E-value=3 Score=19.69 Aligned_cols=181 Identities=10% Similarity=0.047 Sum_probs=75.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 967999999999999999999999999999832-9989999999999999999999999997899997316789999999
Q gi|254780323|r 272 SKYLGYLVLLVICYGTAINLVEGPWKEKVRQLY-PTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPL 350 (491)
Q Consensus 272 s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~-~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi 350 (491)
+|-...+.++-++|.+..-=..-.=+..-.+.+ -++.+-. ++++.+-.++.++.=+.+.+..+.|-......+-.
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~----~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~ 338 (459)
T KOG4686 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAG----NILSTVYGISAVLSPVFGAISDKYGFNLWWVASAC 338 (459)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC----CHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHH
T ss_conf 76399999999999999877764237777876188754224----45664553433524567776765266421578999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHEECCHHHHHHHHHHHHH
Q ss_conf 99999999999984101234666787300207999999999999999876344646-68777522697673657776788
Q gi|254780323|r 351 MILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDS-TKEMAFIPLDDEFRTKGKAVVDV 429 (491)
Q Consensus 351 ~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p-~~E~l~~pl~~~~R~k~K~~iD~ 429 (491)
+.-+.+-.-..+..++|..... + -...|++-.- --.+.-.-+|+++-..+-+++..
T Consensus 339 ~~tl~~H~~l~Ft~lsPy~~m~--------------~---------lGLsysllAcslWP~va~~vpE~qLGTaygf~qs 395 (459)
T KOG4686 339 ILTLLGHSGLFFTFLSPYTSMT--------------F---------LGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQS 395 (459)
T ss_pred HHHHHHHHHHHHHHCCHHHHHH--------------H---------HHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHH
T ss_conf 9999876667753415798899--------------9---------8500888998874334663778770406889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 876466777999999999983000023337999999999999999999997089
Q gi|254780323|r 430 IGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVNQLSKE 483 (491)
Q Consensus 430 ~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~~~~L~~~ 483 (491)
+- .+|-+..+++..++.. +.++.... ....+++..+++.-....++++||
T Consensus 396 Iq-NLgla~i~Iiag~i~d--~~g~y~~l-e~ffl~~~~~aL~svgil~~~N~k 445 (459)
T KOG4686 396 IQ-NLGLAFIPIIAGFIAD--GDGSYDNL-EAFFLIIGLMALTSVGILFYLNKK 445 (459)
T ss_pred HH-HHHHHHHHHHHHEEEC--CCCCHHHH-HHHHHHHHHHHHHHHHHHHHEECC
T ss_conf 98-5115587554412666--88860469-999999999999998888520032
No 122
>pfam00854 PTR2 POT family. The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.
Probab=81.90 E-value=3.2 Score=19.52 Aligned_cols=41 Identities=17% Similarity=0.183 Sum_probs=25.0
Q ss_pred HHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99864098---998999999998999999998899999963012
Q gi|254780323|r 171 FANRITKT---EEATRFYATFGLVGNVGLIFAGGIVKTFSKLTN 211 (491)
Q Consensus 171 ~~n~~f~~---~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~ 211 (491)
+..|.+++ ++-.+.|..+..+-|+|+.++...+.++.+..+
T Consensus 56 ~~~~qy~~~~~~~~~s~F~~fY~~iNiGa~~~~~~~~~l~~~~g 99 (372)
T pfam00854 56 FGADQFDETQDPRRDGFFSWFYFSINAGSLIATIITPYLQQNVG 99 (372)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
T ss_conf 89986799860567768889999999999984026678877223
No 123
>TIGR02840 spore_YtaF putative sporulation protein YtaF; InterPro: IPR014205 This entry represents YtaF, which represents a protein family identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome. The phylogenetic profile of the members matches the subset of the Firmicutes capable of forming endospores. These species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, and Geobacillus kaustophilus..
Probab=81.06 E-value=3.4 Score=19.31 Aligned_cols=52 Identities=15% Similarity=0.156 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC---CCCCHHHHHHHHHCCHHHH
Q ss_conf 9999999999999999984024522332000011234---5788899999983096799
Q gi|254780323|r 221 TLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKK---LKLSVLESLRMALNSKYLG 276 (491)
Q Consensus 221 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~k~i~~s~yL~ 276 (491)
..++..+.+..++.. ..+++++.++++.++.++ -+.+..+.+++++|+|...
T Consensus 68 ~~iL~~~G~~~~~~~----~r~k~~~~~~~~~~~~~~vWr~~~~~lg~~~~IL~~P~~A 122 (215)
T TIGR02840 68 AIILIAIGIWIIYNA----FRPKKERKKRSSEKDLSKVWRFELKSLGIVIQILRNPEVA 122 (215)
T ss_pred HHHHHHHHHHHHHHH----HCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCC
T ss_conf 999999999999998----6057888763001357610244650013556653377626
No 124
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=80.13 E-value=3.6 Score=19.09 Aligned_cols=279 Identities=13% Similarity=0.113 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHHH--------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 99999999999999--------99999877886512485446799999999999--999999999996338999999999
Q gi|254780323|r 30 IPMTLMMFLVLFNF--------STLRPIKDSLVVPHMGAEIISFVKLWCVFPSA--ILFTILYMKLSNILETEKLFYVVV 99 (491)
Q Consensus 30 ~~~~~~~F~i~~~y--------~~lr~~rd~l~~~~~g~e~lp~l~~~~~l~~s--~~~~~~y~~l~~~~~~~~l~~~~~ 99 (491)
+++..-..++.++. -++..+||.+-++...+..+ .++|+- =++.+.-.++.+|++.+|.+
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPlL~~Ir~~~gls~s~aGlL------TtLPll~fg~~ap~a~~Lar~~g~er~l---- 80 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLL------TTLPLLAFGLFAPAAPRLARRFGEERSL---- 80 (395)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_conf 089998999972353145300310999987716618888899------9889999998875407999987568899----
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 99999999999998421001465234555531010134457876555799999999999999999999999998640989
Q gi|254780323|r 100 SFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTE 179 (491)
Q Consensus 100 ~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~ 179 (491)
+++..+...+..+= .....+ .+ ..++. .+-+ +.-+..++-=+..-+-| ++
T Consensus 81 -~~~llli~~G~~iR--------------~~~~~~----~L------~~gt~-l~G~---gIav~nVLLPslIK~~F-pk 130 (395)
T COG2807 81 -FLALLLIAAGILIR--------------SLGGLP----LL------FLGTL-LAGA---GIAVINVLLPSLIKRDF-PK 130 (395)
T ss_pred -HHHHHHHHHHHHHH--------------HCCCHH----HH------HHHHH-HHHH---HHHHHHHHHHHHHHHHC-CC
T ss_conf -99999999999998--------------205388----99------99999-9974---69999886269998664-54
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98999999998999999998899999963012322489999999999999999999998402452233200001123457
Q gi|254780323|r 180 EATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLK 259 (491)
Q Consensus 180 qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (491)
+..+.-|+.+.-=.+|+..++..+..++++.+ .+.-......+.+ ..++..|+-+. .+++ ....+.+++++
T Consensus 131 ~~~~mtglYs~sl~~~aaLaa~lavpla~~~~--gW~~aL~~WAl~a--llAl~~WlPq~--~r~~---~~~~~~~~~~~ 201 (395)
T COG2807 131 RVGLMTGLYSTSLGAGAALAAALAVPLAQHSG--GWRGALGFWALLA--LLALLIWLPQA--LREQ---AASIATKLVSV 201 (395)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHH--HHHHHHHHHHC--CCCC---CCCCCCCCCCC
T ss_conf 01268769999998999887662657988626--1799999999999--99999986530--3521---10124566755
Q ss_pred CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88899999983096799999999999999999999999999983299899999999999999999999999978999973
Q gi|254780323|r 260 LSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSF 339 (491)
Q Consensus 260 ~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~ 339 (491)
. .++|||.-..+.++.-+.+.....+-.-.-.+..|+--++++-..-.+. .+..++..-+..+.+.+|.
T Consensus 202 ~-------~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl----~~l~~~~~~ll~P~la~R~ 270 (395)
T COG2807 202 R-------KVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSL----MQLAQLPTALLIPLLARRS 270 (395)
T ss_pred C-------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_conf 5-------0035840689999997668899999999999999758787875029999----9999998987889999883
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1678999999999999999999984101234
Q gi|254780323|r 340 RWFTSAIITPLMILITGGGFFVFVIFEDALL 370 (491)
Q Consensus 340 G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~ 370 (491)
.-.....+. ..+..-.++.++.++.....
T Consensus 271 ~n~r~~~~~--~~~~~l~G~~G~~~~P~~~~ 299 (395)
T COG2807 271 KNQRPLVVL--ALLLMLVGLVGLLLAPGQLP 299 (395)
T ss_pred CCCCHHHHH--HHHHHHHHHHHHHHHHHHHH
T ss_conf 152349999--99999999988998401479
No 125
>pfam02487 CLN3 CLN3 protein. This is a family of proteins from the CLN3 gene. A missense mutation of glutamic acid (E) to lysine (K) at position 295 in the human protein has been implicated in Juvenile neuronal ceroid lipofuscinosis (Batten disease).
Probab=79.52 E-value=3.7 Score=18.95 Aligned_cols=39 Identities=5% Similarity=-0.037 Sum_probs=23.0
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999864098998999999998999999998899999963012
Q gi|254780323|r 168 FWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTN 211 (491)
Q Consensus 168 FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~ 211 (491)
|-+++. .+.+ ..-+--+.|...|+++|+..-..+.+..+
T Consensus 128 fL~lt~-~y~~----~~lsawsSGTG~AGl~Gs~~Y~~lT~~~~ 166 (409)
T pfam02487 128 FLALTA-HYPR----IVIAGWSSGTGGAGLIGAFSYAFLTQIAG 166 (409)
T ss_pred HHHHHH-HCCH----HHHHHCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 999985-4571----45430035667156777889998873327
No 126
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=78.92 E-value=3.9 Score=18.82 Aligned_cols=39 Identities=5% Similarity=-0.084 Sum_probs=28.3
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999986409899899999999899999999889999996
Q gi|254780323|r 169 WQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFS 207 (491)
Q Consensus 169 W~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~ 207 (491)
-.+.+|+..++.-.++-+....+-.+|.+++......+.
T Consensus 148 p~yisE~ap~~~RG~~~~~~~~~~~~G~l~~~~v~~~~~ 186 (486)
T PRK10077 148 PMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIA 186 (486)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998487867414756999999999999999999986
No 127
>KOG2563 consensus
Probab=76.89 E-value=4.4 Score=18.40 Aligned_cols=98 Identities=11% Similarity=0.092 Sum_probs=43.4
Q ss_pred CCCHHHHHHHHHCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q ss_conf 7888999999830967999999-9999999999999999999998329989999999999999999999999997899-9
Q gi|254780323|r 259 KLSVLESLRMALNSKYLGYLVL-LVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNI-L 336 (491)
Q Consensus 259 ~~~~~~~~k~i~~s~yL~~l~~-~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~l-l 336 (491)
..++.++++..++|+...-++. +.+..++-+. ........+...+.+. ..+.+.| .+..+..++-..+.+.+ -
T Consensus 252 ~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~-l~~~l~~~l~~sgY~~-~~aG~ig---~l~iv~Gmlga~~~gii~D 326 (480)
T KOG2563 252 DASFPKSIKSCFKNRQFIILAICYGIGLGLFNS-LSTLLNLALCPSGYEG-VFAGYIG---ALMIVAGMLGALASGIIAD 326 (480)
T ss_pred CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCC-CCCCHHH---HHHHHHHHHHHHHHHHHHH
T ss_conf 375789999997384569999998532899999-9998442101266774-2243567---9999988999988875443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9731678999999999999999999
Q gi|254780323|r 337 KSFRWFTSAIITPLMILITGGGFFV 361 (491)
Q Consensus 337 ~r~G~~~~l~i~Pi~~li~~~~ff~ 361 (491)
|+.+.+.+.++.-...+++++.++.
T Consensus 327 ktk~fk~~~~v~~~~~~v~~~~l~~ 351 (480)
T KOG2563 327 KTKKFKLTTLVLYLFALVGTLMLLT 351 (480)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5535899999999989999999987
No 128
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter; InterPro: IPR004745 Na(+)-dependent inorganic phosphate cotransporter proteins belong to this group. The mammalian proteins are important for the resorption of phosphate by the kidney and may be involved in actively transporting phosphate into cells via sodium ion cotransport in the renal brush border membrane.; GO: 0015114 phosphate transmembrane transporter activity, 0006817 phosphate transport, 0016021 integral to membrane.
Probab=76.35 E-value=4.5 Score=18.29 Aligned_cols=326 Identities=11% Similarity=0.004 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999633899999999999999999999998421001465234555531010134457876555799
Q gi|254780323|r 70 CVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSF 149 (491)
Q Consensus 70 ~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 149 (491)
..+-..+....-.++++++|+.+|++-.-.. +..+...+.|-.....-... .-.-..++++ .
T Consensus 100 S~fyG~~~~qiP~G~la~~Y~~k~~iG~~~~-----~~~v~~~liP~aA~~g~~~G-----~~~~Rv~qG~-------~- 161 (514)
T TIGR00894 100 SFFYGSVIIQIPVGYLAGKYGTKKVIGFALL-----LSSVLSFLIPIAAGVGFAWG-----VIVLRVLQGI-------G- 161 (514)
T ss_pred HHHHHEEEEEECCHHHHHHHCHHHHHHHHHH-----HHHHHHHHHHHHHHCCCCEE-----EEEEEEHHHH-------H-
T ss_conf 6666125234160356314043799999999-----99999987465541210110-----2345321201-------2-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHHHHHHH
Q ss_conf 999999999999999999999998640989989999999989999999988999999630123224899-9999999999
Q gi|254780323|r 150 ALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYS-MLTLILSSIL 228 (491)
Q Consensus 150 ~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~-~~~~~~~~~~ 228 (491)
=|.+.-+ + -.+...=.-|+|-.|+-+...+|..+|.++.=.+...+.+..+..-..-- ....+.....
T Consensus 162 ---------~G~~~p~-~-h~l~~KW~PP~ER~r~~s~~~sG~~~G~~i~lp~~G~i~~~~GskF~~GWP~vFYifGivG 230 (514)
T TIGR00894 162 ---------QGLVSPA-Q-HELLAKWIPPNERSRLTSAVLSGFQLGTFIVLPISGLICESDGSKFLLGWPMVFYIFGIVG 230 (514)
T ss_pred ---------HHHHCCC-C-EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHH
T ss_conf ---------3311464-3-0226630588750579999862688989999863045553567401477614677889999
Q ss_pred HHHH-HHHHHHHCCCCCCCCCCCCCCCCC---------CCC---CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HH
Q ss_conf 9999-999998402452233200001123---------457---888999999830967999999999999999999-99
Q gi|254780323|r 229 LMAV-YRWMNLYVLTDPQQYSPKRGSVKK---------KLK---LSVLESLRMALNSKYLGYLVLLVICYGTAINLV-EG 294 (491)
Q Consensus 229 ~~~l-~~~~~~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~-e~ 294 (491)
+... .+....+.. |+++..-...||+ ... ..----+|.+.+|+-+..+..-.+.+.-..+.+ .+
T Consensus 231 ~~~~~~W~~l~~D~--P~~HP~is~~Ek~YI~~sL~~~~~~krn~r~~~P~KAi~kS~P~W~~~~a~~~~~w~~~~l~~~ 308 (514)
T TIGR00894 231 TAVSIAWFVLVYDD--PSDHPCISESEKKYINSSLVQQVSSKRNSRQSLPIKAILKSLPVWAIVFASFGHIWGLNTLMTY 308 (514)
T ss_pred HHHHHHHHHHHCCC--CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999989873137--5457423357899998877752012225789884456565459999999987533078999997
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999983299899999999999-----99999999999997-899997316789999999999999999999841012
Q gi|254780323|r 295 PWKEKVRQLYPTQNSYAQFMGQFI-----QWTGIVTIVFMILG-SNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDA 368 (491)
Q Consensus 295 ~~k~~~~~~~~~~~~~~af~g~~~-----~~v~i~tii~qll~-~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~ 368 (491)
.= ...++...-...-+.+.+..- ....+.+.+..++. +..+++.-+|...- -+....-++......+++..
T Consensus 309 ~P-~f~~~~L~~~~~~nGlLSsLPyL~~~l~~~~~~~~AD~l~~~~~ls~t~~RKl~t--~ig~~~~~~~~~al~Y~snl 385 (514)
T TIGR00894 309 LP-TFISSVLHVNIRENGLLSSLPYLLAWLCGVLASQLADYLLSRKILSLTAVRKLFT--FIGLLGPGIFVVALPYLSNL 385 (514)
T ss_pred HH-HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
T ss_conf 77-9998873465312540436799999999999998758987146502677889999--99988899999999988689
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 34666787300207999999999999999876344646687775226976736577767888764667779999999999
Q gi|254780323|r 369 LLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFM 448 (491)
Q Consensus 369 ~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~ 448 (491)
..... .+.+ +..-..--+..-++.-.--..+.|+. -+++.++..-.|.. +|++...+..
T Consensus 386 ~~~~~-----------~i~~-----L~lA~~~~g~~~~G~lin~lDLaP~y----~Gf~~g~~~~~g~~-~Gl~~~~~~G 444 (514)
T TIGR00894 386 YNAYS-----------TIII-----LTLANALAGFVLSGVLINALDLAPRY----AGFIKGVTTLIGSL-GGLISSTLAG 444 (514)
T ss_pred HHHHH-----------HHHH-----HHHHHHHCCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHH-HHHHHHHHHH
T ss_conf 89999-----------9999-----99987630010000788887622578----99999999999878-8789999999
Q ss_pred HH
Q ss_conf 83
Q gi|254780323|r 449 LF 450 (491)
Q Consensus 449 ~~ 450 (491)
.+
T Consensus 445 ~~ 446 (514)
T TIGR00894 445 QL 446 (514)
T ss_pred HH
T ss_conf 86
No 129
>TIGR00926 2A1704 Oligopeptide transporter (Peptide:H+ symporter); InterPro: IPR004768 Oligopeptide transporter, peptide:H+ symporter supports the proton-coupled intake of oligopeptides of 2 to 4 amino acids. These proteins may constitute a major route for the absorption of the end products of protein digestion.; GO: 0015198 oligopeptide transporter activity, 0006857 oligopeptide transport, 0016021 integral to membrane.
Probab=72.15 E-value=5.6 Score=17.54 Aligned_cols=211 Identities=13% Similarity=0.099 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHH-------HHHHHHHHCCH-HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH---CC-CCCHH--
Q ss_conf 99999999999999-------99999864098-9989---999999989999999988999999630---12-32248--
Q gi|254780323|r 154 VFAELWGAVMINLM-------FWQFANRITKT-EEAT---RFYATFGLVGNVGLIFAGGIVKTFSKL---TN-ELMIY-- 216 (491)
Q Consensus 154 v~~e~~~~~vis~~-------FW~~~n~~f~~-~qaK---Rlf~li~~g~~ig~i~gg~~~~~l~~~---~~-~~~~~-- 216 (491)
.+.++-|+++|.+- ==+|..|-|+. +|.+ |+|.++...=|.|.+++=.++..+=.. .| ....+
T Consensus 111 ~~ldl~GL~lIAlGTGGIKPCVSAFGGDQF~~P~q~~~~s~FFS~FYfaINAGSLiSt~iTPiLR~~~~CfGs~~~CypL 190 (781)
T TIGR00926 111 PALDLVGLLLIALGTGGIKPCVSAFGGDQFEEPGQERMRSRFFSMFYFAINAGSLISTIITPILRGSVKCFGSQQDCYPL 190 (781)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCH
T ss_conf 57889999999985279776637887777787458999985201788898788999998625460002455888543420
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCC------------CCCCCCCCCCC-CCHH-----------------
Q ss_conf --99999999999999999999984024-522332------------00001123457-8889-----------------
Q gi|254780323|r 217 --YSMLTLILSSILLMAVYRWMNLYVLT-DPQQYS------------PKRGSVKKKLK-LSVL----------------- 263 (491)
Q Consensus 217 --~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~------------~~~~~~~~~~~-~~~~----------------- 263 (491)
-...++++.++++...++.+++..++ ++|-.. ..+..+++++| .++.
T Consensus 191 AFGvPaiLMi~AlivF~~Gs~~YkK~PPs~~Ni~~~V~~~I~~Al~~~~~~~S~~~PK~~HWLd~a~~~h~CAL~~~C~~ 270 (781)
T TIGR00926 191 AFGVPAILMIVALIVFMAGSFMYKKQPPSKGNIIFKVIRCIATALKNKFKSRSTDKPKREHWLDYAKEKHDCALDAKCKE 270 (781)
T ss_pred HCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHH
T ss_conf 03416899999999998303134759178665057889999999865412677888765400555377889541302343
Q ss_pred -----HHHHHHHCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH-H------HHHHHHHHHHHH
Q ss_conf -----9999983096799999999--9999999999999999999832998999999999-9------999999999999
Q gi|254780323|r 264 -----ESLRMALNSKYLGYLVLLV--ICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQ-F------IQWTGIVTIVFM 329 (491)
Q Consensus 264 -----~~~k~i~~s~yL~~l~~~v--~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~-~------~~~v~i~tii~q 329 (491)
..-....|+|++-.+=.+. +..-+=.-+++..|--+-+...--......-.|. | =+++|.+-++..
T Consensus 271 L~~~krnknlC~~~r~I~~~k~L~rVl~lf~PlPmFWALfDQQGS~W~lQA~~Mdg~v~~tf~i~PDQMqvlNa~LiL~f 350 (781)
T TIGR00926 271 LQAEKRNKNLCAKKRLIDDVKALLRVLVLFIPLPMFWALFDQQGSRWTLQATRMDGKVGGTFEILPDQMQVLNAVLILIF 350 (781)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEHHHHCCCCCCCCEEECCCHHHHHHHHHHHHH
T ss_conf 00001234456654459999999999988637124776301354451101101253120301226416778879999999
Q ss_pred --H---HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q ss_conf --9---97899997316789-99999999999999999984
Q gi|254780323|r 330 --I---LGSNILKSFRWFTS-AIITPLMILITGGGFFVFVI 364 (491)
Q Consensus 330 --l---l~~~ll~r~G~~~~-l~i~Pi~~li~~~~ff~~~~ 364 (491)
+ +.-|+++|.|++.+ |.=+-+..++++++|+..+.
T Consensus 351 iPlFd~ivYP~~~KcG~r~t~LrKMa~G~lLaalaF~vag~ 391 (781)
T TIGR00926 351 IPLFDVIVYPAIAKCGIRFTPLRKMAVGGLLAALAFAVAGI 391 (781)
T ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 76877888978986057898347788789999999998735
No 130
>TIGR02871 spore_ylbJ sporulation integral membrane protein YlbJ; InterPro: IPR014226 Members of this entry include YlbJ, from Bacillus subtilis. They are found exclusively in the Firmicutes (low-GC Gram-positive bacteria) and are known from studies in B. subtilis to be part of the sigma-E regulon . Mutation leads to a sporulation defect, confirming that members of this entry are involved in sporulation. The protein appears to be universal among endospore-forming bacteria, and in Symbiobacterium thermophilum IAM 14863, there are two ORFs encoding YlbJ that are distant from each other..
Probab=71.99 E-value=5.7 Score=17.52 Aligned_cols=151 Identities=16% Similarity=0.182 Sum_probs=71.1
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-
Q ss_conf 98640989989999999989999999--988999999630123224899999999999999999999984024522332-
Q gi|254780323|r 172 ANRITKTEEATRFYATFGLVGNVGLI--FAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYS- 248 (491)
Q Consensus 172 ~n~~f~~~qaKRlf~li~~g~~ig~i--~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~- 248 (491)
=++..+.+|+.|+ .+...|.|-+ +|...+.-+.+ ....+.....--++++.+..+.+--.+...++.+++.
T Consensus 102 e~~lI~~~e~eRL---~nfann~gPLFi~GaVg~sml~N---p~lGy~Llis~YLs~I~~GLI~~~~~~~~~~~~~~~~~ 175 (384)
T TIGR02871 102 EEKLITFEEAERL---LNFANNSGPLFIIGAVGTSMLNN---PTLGYILLISHYLSCITVGLILRFKKRKKRKKLSKKKK 175 (384)
T ss_pred HCCCCCHHHHHHH---HHHHCCCCHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
T ss_conf 5477456899999---99872788378999999974057---56899999985899999998607774146665564168
Q ss_pred -------------CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHCCCH
Q ss_conf -------------0000112345788899999983096799999999999999999999999999--------9832998
Q gi|254780323|r 249 -------------PKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKV--------RQLYPTQ 307 (491)
Q Consensus 249 -------------~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~--------~~~~~~~ 307 (491)
....+++++-+...+|++.. ..+-++.++.+++++.++..+++..+-... -..++-|
T Consensus 176 ~~fS~~~AL~~l~~~~~~s~~~~G~~L~~aie~--av~til~vgGFvIlFSV~i~~lk~~~l~~~ls~~~~~l~~L~~~~ 253 (384)
T TIGR02871 176 TEFSLKDALTGLHSIRLKSKKNIGKLLKEAIEN--AVKTILLVGGFVILFSVLISLLKNSFLFKLLSSILKKLLSLFNLP 253 (384)
T ss_pred CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 766578898878323540678876899999999--999998996699999999999998778887999999999984788
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHH
Q ss_conf 999-99999999999999999999
Q gi|254780323|r 308 NSY-AQFMGQFIQWTGIVTIVFMI 330 (491)
Q Consensus 308 ~~~-~af~g~~~~~v~i~tii~ql 330 (491)
++. ..++..+--++|-..++-|.
T Consensus 254 ~~li~~f~lG~~EiTnGs~~IS~~ 277 (384)
T TIGR02871 254 EQLIIGFLLGILEITNGSKLISES 277 (384)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 002478999999999876887607
No 131
>pfam01770 Folate_carrier Reduced folate carrier. The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy, such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules.
Probab=68.06 E-value=6.8 Score=16.91 Aligned_cols=164 Identities=16% Similarity=0.195 Sum_probs=86.8
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CHHHHHHHHHHHHHHHHHHH-H-----HHHH
Q ss_conf 99999986409899899999999899999999889999996301232--24899999999999999999-9-----9998
Q gi|254780323|r 167 MFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNEL--MIYYSMLTLILSSILLMAVY-R-----WMNL 238 (491)
Q Consensus 167 ~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~-~-----~~~~ 238 (491)
.|+++.=..-++++=+|.-+.--+.--+|-.+||.....+....... .+...+......+....... + ..++
T Consensus 113 AYysYIYs~Vd~~~YQkvTsy~Raa~L~G~~~s~vlgQllvs~~~~~y~~Ln~ISl~~~~~a~~~a~fLP~v~~Sl~F~~ 192 (410)
T pfam01770 113 AYYSYIYSKVDPERYQRVTSYTRAATLVGKFLSGVLGQLLVSLGRVSYFTLNYISLASQVVALFLSLFLPRPKRSLFFHR 192 (410)
T ss_pred HHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEC
T ss_conf 55402467438554156989999999999999888877831347777788879879999999999995799984211115
Q ss_pred HCCCCCCCCCCC---CCC--------CCCCCC-------CCHHHHHHHHHCCHHHHHHHHHH----HHHHHHHHHHHHHH
Q ss_conf 402452233200---001--------123457-------88899999983096799999999----99999999999999
Q gi|254780323|r 239 YVLTDPQQYSPK---RGS--------VKKKLK-------LSVLESLRMALNSKYLGYLVLLV----ICYGTAINLVEGPW 296 (491)
Q Consensus 239 ~~~~~~~~~~~~---~~~--------~~~~~~-------~~~~~~~k~i~~s~yL~~l~~~v----~~~~~~~tl~e~~~ 296 (491)
....++...+.+ +.+ +++..+ ..++..+|.-.+||.++.-++-- +.|..+.+-+...|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ysn~~vl~WSlWwa~at~gy~qV~~YvQ~LW 272 (410)
T pfam01770 193 KSEADDTESESNVMEEGSENGGLTAESGGLEKFSRLSVLRLLWYHLKSCYSNPLLLYWSLWWAFATAGYYQVVNYVQNLW 272 (410)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 67433577655433456666654445544342258899999999999984788511223999998738999999999999
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999998329989999999999999999999999997899
Q gi|254780323|r 297 KEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNI 335 (491)
Q Consensus 297 k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~l 335 (491)
+.. .| +++...+-|..+.+.+.++-+..+..+.+
T Consensus 273 ~~v----~~-~~~~~~yNG~VeA~~TllgA~~a~~~G~v 306 (410)
T pfam01770 273 KHV----EP-SDKSSIYNGGVEAASTLLGAVAAFAAGYL 306 (410)
T ss_pred HHH----CC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 984----57-78742005399999999999999987761
No 132
>TIGR00885 fucP L-fucose:H+ symporter permease; InterPro: IPR005275 This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by at least four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. .
Probab=57.42 E-value=10 Score=15.52 Aligned_cols=159 Identities=14% Similarity=0.103 Sum_probs=88.4
Q ss_pred CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-----HHHHHHHHHHHHHHHHHH
Q ss_conf 001123457888999999830967999999999999999999999999999832998-----999999999999999999
Q gi|254780323|r 251 RGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQ-----NSYAQFMGQFIQWTGIVT 325 (491)
Q Consensus 251 ~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~-----~~~~af~g~~~~~v~i~t 325 (491)
..+.+++++.+|..+++.+.+.+.-|.=.+-=.+|--+=+.=+.---.++.+..+.+ ++-++..++-+.++..+.
T Consensus 218 sDn~~~a~qisF~~~lsRla~~~~yRegViAQffYVGvQi~CWtfii~Ya~rl~~~~~~G~~~~saevlsqqy~i~aMvi 297 (427)
T TIGR00885 218 SDNHEDAKQISFSASLSRLARKRKYREGVIAQFFYVGVQIMCWTFIIQYAVRLIFGKTAGFAAKSAEVLSQQYNIVAMVI 297 (427)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57720034655058999998642468999999999878999999999976561478432001345788875345667877
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999-997899997316789999999999999999999841012346667873002079999999999999998763446
Q gi|254780323|r 326 IVFM-ILGSNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMF 404 (491)
Q Consensus 326 ii~q-ll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~ 404 (491)
.+.. |.+++++||+--...+.+.-+...+...+ .+ |-+......... .+..++- =.+
T Consensus 298 F~isRFi~T~l~~yl~a~k~L~~~Ai~g~~~~Lg---~i-F~~g~~GLycL~--------------l~SafMs----l~f 355 (427)
T TIGR00885 298 FIISRFIGTFLLKYLAAEKLLMLYAIIGMLLILG---SI-FLDGVVGLYCLV--------------LVSAFMS----LMF 355 (427)
T ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH---HH-HHHHHHHHHHHH--------------HHHHHHC----CCC
T ss_conf 7667889999998628658999999999999999---99-980248999999--------------9973210----322
Q ss_pred HHHHHHHHEECCHHHHHHHHHHHHHHH
Q ss_conf 466877752269767365777678887
Q gi|254780323|r 405 DSTKEMAFIPLDDEFRTKGKAVVDVIG 431 (491)
Q Consensus 405 ~p~~E~l~~pl~~~~R~k~K~~iD~~~ 431 (491)
.+-.-+.---+.+|.|+-+-..|=++.
T Consensus 356 PTIygialkglg~d~k~GaaglvMaI~ 382 (427)
T TIGR00885 356 PTIYGIALKGLGEDTKYGAAGLVMAII 382 (427)
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 468999851464000010578999886
No 133
>TIGR00819 ydaH AbgT transporter family; InterPro: IPR011540 The p-aminobenzoyl-glutamate transporter family includes two putative transporters, the AbgT protein of Escherichia coli and MtrF of Neisseria gonorrhoeae. AbgT expression is apparently cryptic in wild type cells, but when present on a high copy number plasmid, or when expressed at higher levels due to mutation, it allows utilization of p-aminobenzoyl-glutamate as a source of p-aminobenzoate for p-aminobenzoate auxotrophs . p-Aminobenzoate is a constituent of, and a precursor for, the biosynthesis of folic acid. It is not currently known if AbgT is naturally involved in transporting p-aminobenzoyl-glutamate, or if it only becomes involved when under altered regulation. MtrF is an inner membrane protein which, together with the MtrCDE efflux pump, is required for high-level resistance to hydrophobic antimicrobial agents in N. gonorrhoeae . Its role in this process is not known, but it has been suggested that it may be a component of the efflux pump which is dispensible for basal activity, but required for high-level activity ..
Probab=54.34 E-value=11 Score=15.16 Aligned_cols=186 Identities=19% Similarity=0.232 Sum_probs=107.9
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH--H-----------
Q ss_conf 998309679999999999999999999999999998329989999999999999999999999997--8-----------
Q gi|254780323|r 267 RMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILG--S----------- 333 (491)
Q Consensus 267 k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~--~----------- 333 (491)
..+.-||++++|..++++.-.+..+.|-.-.+.+|.+-+=++...+=|.....+.-++-...||+. .
T Consensus 308 ~~V~~SPF~K~IV~lI~LlF~~~~~~YG~~TR~~R~~~~~~~~M~E~M~~l~~y~V~~F~~AQFVA~FNW~N~G~yIAV~ 387 (527)
T TIGR00819 308 GLVAGSPFLKSIVVLIILLFALVSLVYGIITRSLRREADLVNLMIESMKELALYLVIVFFLAQFVAFFNWSNIGKYIAVK 387 (527)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
T ss_conf 72348831678999999999998898865654320000147888754887568999999899999987453144110012
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf --999973167899999999999999999998410123466678730020799999999999999987634464668777
Q gi|254780323|r 334 --NILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMA 411 (491)
Q Consensus 334 --~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l 411 (491)
-+++.-|..+.-...=..++. .|..+..-+.........-+-.|.+++.-+-=.+.+...|+.+-+.+--+=-+-
T Consensus 388 ~~~~L~~~GL~G~~~F~Gl~L~~---~F~~l~I~S~SA~W~~~APIFVPMlML~Gy~P~~~Q~~yRI~DS~~~~~~P~~~ 464 (527)
T TIGR00819 388 LAVILKEVGLAGIVLFVGLILLS---AFLNLFIASASAIWAVLAPIFVPMLMLLGYAPEVIQILYRIADSVVLILAPVSS 464 (527)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 45666542642258999999999---999999861567998861378899986046558999999876444433122023
Q ss_pred HEEC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5226--9767365777678887646677799999999998300002333799999999999999999
Q gi|254780323|r 412 FIPL--DDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYV 476 (491)
Q Consensus 412 ~~pl--~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~ 476 (491)
|.|+ ..-.|||--+-+-|.. ...+ + -.-+..+.++.+.++|..+
T Consensus 465 y~~L~l~~~~~YK~DA~~GT~~------------Sl~L---P------Y~~~FL~~W~~ll~~W~lV 510 (527)
T TIGR00819 465 YVGLILAFLQKYKKDAKLGTLI------------SLVL---P------YSLIFLVVWLLLLLIWVLV 510 (527)
T ss_pred HHHHHHHHHHHHCCCCCCHHHH------------HHHH---H------HHHHHHHHHHHHHHHHHHH
T ss_conf 5899999987421345404688------------8885---4------7899999999999999998
No 134
>PRK11339 abgT putative aminobenzoyl-glutamate transporter; Provisional
Probab=53.99 E-value=11 Score=15.12 Aligned_cols=69 Identities=16% Similarity=0.283 Sum_probs=40.5
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q ss_conf 8309679999999999999999999999999998329989999999999999999999999-99789999731678
Q gi|254780323|r 269 ALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFM-ILGSNILKSFRWFT 343 (491)
Q Consensus 269 i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~q-ll~~~ll~r~G~~~ 343 (491)
+.+||++.++..++.++-....++|- .....+.+..|..+.|++ +..+....+.. |+.+..+..|.|..
T Consensus 295 ~~~SPfm~~iv~ii~l~F~i~G~vYG----~~~g~ik~~~Dv~~~M~~--~m~~m~~yiVl~F~aaQFia~F~~Sn 364 (508)
T PRK11339 295 VMPSPFIKGIVPLIILFFFVVSLAYG----IATRTIRRQADLPHLMIE--PMKEMAGFIVMVFPLAQFVAMFNWSN 364 (508)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHH----EECCEEECHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 55787887499999999997677562----030336258899999999--99973889999999999999974146
No 135
>KOG0253 consensus
Probab=52.15 E-value=12 Score=14.91 Aligned_cols=94 Identities=15% Similarity=0.216 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999978999973167899999999999999999998410123466678730020799999999999999987
Q gi|254780323|r 320 WTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKAT 399 (491)
Q Consensus 320 ~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~i~~~~~k~~ 399 (491)
++.....-=.+++..+++|+|-+.+....-++..+ |.+.++. ...+....++. ..-|
T Consensus 389 itslaefPGlLIt~~iverlGRKkTMal~l~~f~i-----flfll~~-----------c~~rn~~tvll-----f~ar-- 445 (528)
T KOG0253 389 ITSLAEFPGLLITGVIVERLGRKKTMALSLILFGI-----FLFLLTT-----------CKTRNAYTVLL-----FTAR-- 445 (528)
T ss_pred HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHH-----HHHHHHH-----------HCCCCHHHHHH-----HHHH--
T ss_conf 99986287066799999986313588999999999-----9999998-----------52841657799-----9999--
Q ss_pred HHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 634464668777522697673657776788876466777
Q gi|254780323|r 400 KYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSG 438 (491)
Q Consensus 400 kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~ 438 (491)
++.+.+.+.+|.=.|+-.-.+.++.-=|.++..+..+
T Consensus 446 --afisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIg 482 (528)
T KOG0253 446 --AFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIG 482 (528)
T ss_pred --HHHHCHHEEEEEECCCCCCHHHHHCCHHHHHHHHHHH
T ss_conf --9984200089995675352144331300356677640
No 136
>pfam07672 MFS_Mycoplasma Mycoplasma MFS transporter. These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=51.70 E-value=12 Score=14.86 Aligned_cols=141 Identities=17% Similarity=0.192 Sum_probs=60.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 2489999999999999999999998402452233200001123457888999999830967999999999999999999-
Q gi|254780323|r 214 MIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLV- 292 (491)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~- 292 (491)
++........+..+....++.+..++....... +++|.+.+.+.+.+.+.++|+|....++++--.+-++..+-
T Consensus 38 ~W~~i~~~~~ll~~i~lily~~fgk~fD~~~~~-----k~~k~~~~~~~~~s~~~~LK~K~Tw~~~l~yG~wLv~~V~pl 112 (265)
T pfam07672 38 NWVIILTAFILLIFAILILYAWFGKEVDPVAPQ-----KQTKTEQTLSAKPSALSILKNKETWKLILIYGIWLVSVVNPL 112 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-----CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHEEEEEEC
T ss_conf 079899999999999999999980465324652-----332312334457208888567137788999856650477534
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH---HHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999832998999999999999999999999---999--------7899997316789999999999999999
Q gi|254780323|r 293 EGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVF---MIL--------GSNILKSFRWFTSAIITPLMILITGGGF 359 (491)
Q Consensus 293 e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~---qll--------~~~ll~r~G~~~~l~i~Pi~~li~~~~f 359 (491)
--.|.+...+..|..+....--|.+....++..++. .++ .....+|..+..+...+-++..+.+..+
T Consensus 113 t~t~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~I~fv~g~~~gp~~ig~~nk~~~~Rk~fi~t~~~~gi~~~~l~i~~ 190 (265)
T pfam07672 113 TGTWFNSLIAQSPANVVQEINGGGYFWVWPTLIIFFVLGYVLGLFVISPFNKTIYDRKRFLHTLFTLGMVLVLIAIVF 190 (265)
T ss_pred CCCHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 620443003307764223431563023789999999999875146773342111103138999999999999999999
No 137
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=50.15 E-value=13 Score=14.69 Aligned_cols=167 Identities=13% Similarity=0.117 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CH-HHHH
Q ss_conf 279999999999999999999---------987788651248544679999999999999999999999633-89-9999
Q gi|254780323|r 27 KKFIPMTLMMFLVLFNFSTLR---------PIKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKLSNIL-ET-EKLF 95 (491)
Q Consensus 27 ~~~~~~~~~~F~i~~~y~~lr---------~~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~-~~-~~l~ 95 (491)
++....+..=|+==|+||=+| ..+|.+-++..+|..+.-.+...+ -+...+=+|+.+|+ ++ +.++
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slV----Y~t~i~GG~laDrvLG~~~tI~ 96 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLV----YLTPIIGGWLADRVLGTRRTIV 96 (498)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCHHHHHH
T ss_conf 337999999999887454159999999998516667858576688999999999----9988777888887522357799
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999984210014652345555310101344578765557999999999--99999999999999998
Q gi|254780323|r 96 YVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFA--ELWGAVMINLMFWQFAN 173 (491)
Q Consensus 96 ~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~--e~~~~~vis~~FW~~~n 173 (491)
..-.+..+..+.+.. +....++. + ..++.++.+ ..+-. .+| ++..
T Consensus 97 lGail~~iGh~~L~~------~~~~~~~g------------l----------~i~L~~I~iG~Gl~K~-NiS----~llg 143 (498)
T COG3104 97 LGAILMAIGHLVLAI------SSVSGPGG------------L----------YIGLALIIVGTGLFKP-NIS----SLLG 143 (498)
T ss_pred HHHHHHHHHHHHHHC------CCCCCCCH------------H----------HHHHHHHHHCCCCCCC-CHH----HHHH
T ss_conf 989999998999946------54466108------------9----------9999999836665566-678----9889
Q ss_pred HHCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 6409899899--99999989999999988999999630123224899999999999999
Q gi|254780323|r 174 RITKTEEATR--FYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLM 230 (491)
Q Consensus 174 ~~f~~~qaKR--lf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 230 (491)
|.+.++|.+| -|.+...+.|+|+++++.++.+++...+-....-.....+..++...
T Consensus 144 ~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f 202 (498)
T COG3104 144 ELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIF 202 (498)
T ss_pred HHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_conf 85599986657775179998504877899999999986068999999999999999999
No 138
>PRK12768 CysZ-like protein; Reviewed
Probab=48.87 E-value=14 Score=14.54 Aligned_cols=27 Identities=7% Similarity=0.049 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 999999999999832998999999999
Q gi|254780323|r 290 NLVEGPWKEKVRQLYPTQNSYAQFMGQ 316 (491)
Q Consensus 290 tl~e~~~k~~~~~~~~~~~~~~af~g~ 316 (491)
-+..-++...+...+.+++|-.+.-..
T Consensus 161 yLLGREyfelaA~R~~~~~ea~~lR~~ 187 (241)
T PRK12768 161 YLLGREYFEFAAMRFRSEAEAKAMRRD 187 (241)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 998079999999971788999999887
No 139
>pfam04341 DUF485 Protein of unknown function, DUF485. This family includes several putative integral membrane proteins.
Probab=46.77 E-value=14 Score=14.31 Aligned_cols=63 Identities=21% Similarity=0.277 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCH
Q ss_conf 9999999999999999999987-78865124-854467999999999999999999999963-389
Q gi|254780323|r 29 FIPMTLMMFLVLFNFSTLRPIK-DSLVVPHM-GAEIISFVKLWCVFPSAILFTILYMKLSNI-LET 91 (491)
Q Consensus 29 ~~~~~~~~F~i~~~y~~lr~~r-d~l~~~~~-g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~-~~~ 91 (491)
.+.+...+.+.-++|-++=... |-+...-. |.-++-++.....++.+.+++.+|.+.+|+ +++
T Consensus 18 ~~~l~~~~l~~Y~~fill~af~p~~l~~~v~~G~it~gi~~g~~~~v~~~~lt~iYv~~AN~~~D~ 83 (91)
T pfam04341 18 AWPLTAIMLVVYYGFILLVAFAPGFLGTPLGPGVITLGIPLGLGQFVFTFALTGIYVRRANREFDP 83 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf 999999999999999999995999976925489720999999999999999999999998060268
No 140
>COG4209 LplB ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism]
Probab=44.60 E-value=16 Score=14.07 Aligned_cols=69 Identities=17% Similarity=0.238 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 44646687775226976736577767888764667779999999999830000233379999999999999999999970
Q gi|254780323|r 402 TMFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVNQLS 481 (491)
Q Consensus 402 sl~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~~~~~~~~~~~~i~i~~~Wi~~~~~L~ 481 (491)
.+++...|..|.--++.. +.....+|+.++|.|-..|-.-...- .+..--.++++-+..+.++.
T Consensus 237 ~i~~~gFe~~yll~~~~~-~~v~~vldtYVy~~gl~~Gd~s~sTA---------------aGlf~svVg~iLl~~aN~ia 300 (309)
T COG4209 237 NIFNAGFELFYLLPNPSG-YDVTEVLDTYVYRGGLVTGDYSYSTA---------------AGLFQSVVGFILLFLANRIA 300 (309)
T ss_pred HHHHCCHHHEEEECCCCC-CCHHHHHHHHHHHHCCCCCCCCHHHH---------------HHHHHHHHHHHHHHHHHHHH
T ss_conf 376537256066057668-74898999999981013575118999---------------99999999999999999999
Q ss_pred HHHHH
Q ss_conf 89999
Q gi|254780323|r 482 KEYTQ 486 (491)
Q Consensus 482 ~~y~~ 486 (491)
|++++
T Consensus 301 kr~~~ 305 (309)
T COG4209 301 KRFDN 305 (309)
T ss_pred HHHCC
T ss_conf 97062
No 141
>pfam11368 DUF3169 Protein of unknown function (DUF3169). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=44.47 E-value=16 Score=14.06 Aligned_cols=28 Identities=21% Similarity=0.115 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9989999999989999999988999999
Q gi|254780323|r 179 EEATRFYATFGLVGNVGLIFAGGIVKTF 206 (491)
Q Consensus 179 ~qaKRlf~li~~g~~ig~i~gg~~~~~l 206 (491)
+.-+|+-..+-.||-+|+++|+......
T Consensus 6 ~~~~r~~~~lLlg~iiGGiiG~~~~~~~ 33 (248)
T pfam11368 6 KRILRYLIFLLLGGIIGGIIGGFGGAIA 33 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999998
No 142
>pfam03547 Mem_trans Membrane transport protein. This family includes auxin efflux carrier proteins and other transporter proteins from all domains of life.
Probab=43.49 E-value=16 Score=13.95 Aligned_cols=102 Identities=11% Similarity=0.044 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 89989999999989999999988999999630123224899999999999999999999984024522332000011234
Q gi|254780323|r 178 TEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQQYSPKRGSVKKK 257 (491)
Q Consensus 178 ~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (491)
.++.++.+..-+..+|.|-+-=+.....+ ++..............+...............+.+..+....+.++.
T Consensus 90 ~~~~~~~~~~~~~~~N~~~iGlPl~~~l~----G~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 165 (321)
T pfam03547 90 PLEWRGVLILTSAFPNTGFLGLPLLLALY----GEEGLSYAIISVVLGVIIIWTLGYFLIESRGAKRDKSEESGDTSGSM 165 (321)
T ss_pred CHHHHHHHHHHHHCCCHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
T ss_conf 77667898988861310377999999982----83069999999999999999999999951200122111111110013
Q ss_pred CCCCHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 57888999999830967999999999
Q gi|254780323|r 258 LKLSVLESLRMALNSKYLGYLVLLVI 283 (491)
Q Consensus 258 ~~~~~~~~~k~i~~s~yL~~l~~~v~ 283 (491)
.+.......+...+||-+.....=..
T Consensus 166 ~~~~~~~~~~~~l~nP~~ia~i~gl~ 191 (321)
T pfam03547 166 TLLILIVVLLKLILNPPTYASLLGLI 191 (321)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 57679999999984839999999999
No 143
>pfam04276 DUF443 Protein of unknown function (DUF443). Family of uncharacterized proteins.
Probab=42.28 E-value=17 Score=13.81 Aligned_cols=53 Identities=11% Similarity=0.179 Sum_probs=23.4
Q ss_pred HHHCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 86409899899-999999899999999889999996301232248999999999999
Q gi|254780323|r 173 NRITKTEEATR-FYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSIL 228 (491)
Q Consensus 173 n~~f~~~qaKR-lf~li~~g~~ig~i~gg~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 228 (491)
++.-+.++.|. -.+-+++|+ |.++ |...+.+.+..+...-.......++.++.
T Consensus 47 e~L~~~k~~k~~~~~~~~~G~--~Vli-~~LlR~~~~~~ni~~~~~i~~~i~~i~~l 100 (197)
T pfam04276 47 ENLNIVKPNKNNSFGWPVAGG--GVLL-GNLLRPLTDYFNIQSEKLINIIICIIVIL 100 (197)
T ss_pred HHHCCCCCCCCCCCCEEHHHH--HHHH-HHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 651367835454102005869--9999-99999877764670388899999999999
No 144
>PTZ00207 hypothetical protein; Provisional
Probab=41.71 E-value=17 Score=13.75 Aligned_cols=101 Identities=13% Similarity=0.184 Sum_probs=57.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 201477899999999638781123279999999999999999---99998778865124854467999999999999999
Q gi|254780323|r 3 HNQKILSVLLKIWQVFCAVKMSEAKKFIPMTLMMFLVLFNFS---TLRPIKDSLVVPHMGAEIISFVKLWCVFPSAILFT 79 (491)
Q Consensus 3 ~~~~~~~~~~~l~~~~~~i~~~E~~~~~~~~~~~F~i~~~y~---~lr~~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~ 79 (491)
.|||+.|+++|++--. .-....-|+...|. +-..+||-.-+++.|-+.+. +.... ++. ++
T Consensus 16 ~~~~pi~e~~Rf~~Lv------------~g~~~~ic~S~~y~F~l~s~~l~~~y~~sq~dlstIs---TvG~v-~gy-f~ 78 (591)
T PTZ00207 16 ANQKPINEPRRFALLV------------LGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTIT---TVGIA-VGY-FL 78 (591)
T ss_pred CCCCCCCHHHHHHHHH------------HHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHE---EHHHH-HHH-HH
T ss_conf 8989873899999999------------9999998750311033066899988378876511302---04343-125-64
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999996338999999999999999999999984210014652
Q gi|254780323|r 80 ILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPS 123 (491)
Q Consensus 80 ~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~ 123 (491)
.-|+-+.++++++-++.+-...+.+-.++|+. -+.+.+..+
T Consensus 79 lP~g~lyD~~GP~~~~~i~~~~~~lG~ll~~L---~F~g~I~gs 119 (591)
T PTZ00207 79 LPYSFIYDYLGPRPIFVLSMTVFCLGTLLFAL---TFQEVIEGS 119 (591)
T ss_pred HCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHE---EECCEECCC
T ss_conf 25697750248607899999999999999880---047710785
No 145
>TIGR00771 DcuC transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family; InterPro: IPR004669 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates , , , DcuA is used for aerobic growth on C4-dicarboxylates , , whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers , , , , , . Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates , , , . DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB , . These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake , . DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) . ; GO: 0015556 C4-dicarboxylate transmembrane transporter activity, 0015740 C4-dicarboxylate transport, 0016021 integral to membrane.
Probab=41.51 E-value=17 Score=13.73 Aligned_cols=64 Identities=14% Similarity=0.148 Sum_probs=37.5
Q ss_pred CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88999999830967999999999999999999999999999832998999999999999999999999
Q gi|254780323|r 261 SVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVF 328 (491)
Q Consensus 261 ~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~ 328 (491)
+.+++---+.|++-+ -+..+.+ ...+..++||--+...++..++.++.=+=|| +++.|+++++.
T Consensus 204 s~F~g~~gL~Q~~lh-~~t~m~~-~~~~~~~~~f~r~~n~~~~~~~~e~ff~GMg--~~fANVv~l~v 267 (390)
T TIGR00771 204 SLFIGKVGLQQVELH-LVTVMVV-SLAVLIIVEFLRKVNRREVVKDVEEFFNGMG--DSFANVVGLIV 267 (390)
T ss_pred HHHHCCCCCCCCCHH-HHHHHHH-HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH--HHHHHHHHHHH
T ss_conf 887525334266425-5688899-9999999998888414204778999985034--44689999999
No 146
>pfam03820 Mtc Tricarboxylate carrier.
Probab=40.09 E-value=18 Score=13.57 Aligned_cols=13 Identities=31% Similarity=0.797 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHCC
Q ss_conf 9999999986409
Q gi|254780323|r 165 NLMFWQFANRITK 177 (491)
Q Consensus 165 s~~FW~~~n~~f~ 177 (491)
++.||+.+|+.||
T Consensus 101 ~vvFwQw~NQS~N 113 (307)
T pfam03820 101 GVVFWQWFNQSFN 113 (307)
T ss_pred CHHHHHHHHHHHH
T ss_conf 0034897653777
No 147
>PRK10167 hypothetical protein; Provisional
Probab=34.65 E-value=22 Score=12.96 Aligned_cols=14 Identities=7% Similarity=-0.016 Sum_probs=5.2
Q ss_pred CHHHHHHHHHHHHH
Q ss_conf 98999999999999
Q gi|254780323|r 306 TQNSYAQFMGQFIQ 319 (491)
Q Consensus 306 ~~~~~~af~g~~~~ 319 (491)
+++|...+...++.
T Consensus 108 s~~EK~~l~~~I~~ 121 (169)
T PRK10167 108 DSTERQQLAALIDS 121 (169)
T ss_pred CHHHHHHHHHHHHH
T ss_conf 99999999999999
No 148
>TIGR01129 secD protein-export membrane protein SecD; InterPro: IPR005791 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component. . From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone protein (SecB), an ATPase (SecA), an integral membrane complex (SecCY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) . The chaperone protein SecB is a highly acidic homotetrameric protein that exists as a "dimer of dimers" in the bacterial cytoplasm. SecB maintains preproteins in an unfolded state after translation, and targets these to the peripheral membrane protein ATPase SecA for secretion . Together with SecY and SecG, SecE forms a multimeric channel through which preproteins are translocated, using both proton motive forces and ATP-driven secretion. The latter is mediated by SecA. The structure of the Escherichia coli SecYEG assembly revealed a sandwich of two membranes interacting through the extensive cytoplasmic domains . Each membrane is composed of dimers of SecYEG. The monomeric complex contains 15 transmembrane helices. This entry describes the SecD family of transport proteins. Members of this family are highly variable in length immediately after the well-conserved motif LGLGLXGG at the amino-terminal end of this model. Archaeal homologs are not included in the seed. SecD from Mycobacterium tuberculosis has a long Pro-rich insert. ; GO: 0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity, 0006886 intracellular protein transport, 0009276 1-2nm peptidoglycan-based cell wall.
Probab=34.54 E-value=22 Score=12.94 Aligned_cols=111 Identities=15% Similarity=0.248 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999864098998999999998999999998--8999999630123224899999999999999999
Q gi|254780323|r 156 AELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFA--GGIVKTFSKLTNELMIYYSMLTLILSSILLMAVY 233 (491)
Q Consensus 156 ~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~g--g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 233 (491)
+.+||.++|- +|.-+ +|+.+|..++++.++. -.+.-..-...+..++-+...+.+...+.+.
T Consensus 375 A~~~Gl~lV~-~FM~~------------yY~~~G~~A~~aL~~n~m~~~ila~ls~~~gaTLTLPGIAGliLTiG~A--- 438 (522)
T TIGR01129 375 AGLIGLVLVL-VFMIV------------YYRLFGLIAAIALVINGMIVLILAVLSAFGGATLTLPGIAGLILTIGMA--- 438 (522)
T ss_pred HHHHHHHHHH-HHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHH---
T ss_conf 9999999999-99999------------9767889999999999999999999985267503405689999888655---
Q ss_pred HHHHHHCCCCCC--CCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 999984024522--332000011234578889999998309679999999999
Q gi|254780323|r 234 RWMNLYVLTDPQ--QYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVIC 284 (491)
Q Consensus 234 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~ 284 (491)
...++.--++ ++-+.....++....++..++..|+.++---.|++.++.
T Consensus 439 --VDaNVlIyERIkEElr~G~s~~~Ai~~Gf~rA~~~I~DaN~Ttliaa~~Ly 489 (522)
T TIGR01129 439 --VDANVLIYERIKEELRLGKSVQQAIEAGFERAFSTILDANITTLIAALILY 489 (522)
T ss_pred --HHEEEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf --100136740238877478957899988888899999997399999999998
No 149
>KOG3810 consensus
Probab=34.14 E-value=22 Score=12.90 Aligned_cols=162 Identities=15% Similarity=0.160 Sum_probs=84.6
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CHHHHHHHHHHHHHHHHHHH-----HHHHH
Q ss_conf 999999986409899899999999899999999889999996301232--24899999999999999999-----99998
Q gi|254780323|r 166 LMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNEL--MIYYSMLTLILSSILLMAVY-----RWMNL 238 (491)
Q Consensus 166 ~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~-----~~~~~ 238 (491)
+.+.++.=...++++-||--+...+..-.|...|+.....+....... .+...+......+... .+. +.+..
T Consensus 113 IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~-A~fLP~v~rSl~f 191 (433)
T KOG3810 113 IAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLL-ALFLPRVKRSLYF 191 (433)
T ss_pred HHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHH-HHHCCCCCHHHHH
T ss_conf 752501445248899899998867999887677767788876011023344051029899999999-8007998644654
Q ss_pred HCCCCCCC-CCCCCCCCCCCCCCC--------HHHHHHHHHCCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 40245223-320000112345788--------8999999830967999999----9999999999999999999998329
Q gi|254780323|r 239 YVLTDPQQ-YSPKRGSVKKKLKLS--------VLESLRMALNSKYLGYLVL----LVICYGTAINLVEGPWKEKVRQLYP 305 (491)
Q Consensus 239 ~~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~k~i~~s~yL~~l~~----~v~~~~~~~tl~e~~~k~~~~~~~~ 305 (491)
+...++.. .+.++. ..+++..+ .++.++...+||.++.=++ -.+.+.-+.+-....||... |
T Consensus 192 ~~~~~~~~v~~~e~~-~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~----~ 266 (433)
T KOG3810 192 HRLEDKISVGDLEEM-NPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVA----P 266 (433)
T ss_pred HCCCCCCEECCCHHC-CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC----C
T ss_conf 014300300331203-85003567899999999999999855960335479999862435778989999997637----9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 989999999999999999999999997899
Q gi|254780323|r 306 TQNSYAQFMGQFIQWTGIVTIVFMILGSNI 335 (491)
Q Consensus 306 ~~~~~~af~g~~~~~v~i~tii~qll~~~l 335 (491)
+ .-..+-|-.+.+...+..+..+.++.+
T Consensus 267 ~--~~~vyNG~veAv~tlLGa~~~~~~g~l 294 (433)
T KOG3810 267 N--PANVYNGAVEAVSTLLGAIAALAAGYL 294 (433)
T ss_pred C--CHHHHCCHHHHHHHHHHHHHHHHHHHE
T ss_conf 8--156552789999988778999987763
No 150
>TIGR00934 2a38euk potassium uptake protein, Trk family; InterPro: IPR004773 The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and Triticum aestivum (Wheat). The proteins of Escherichia coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterised. The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. This family is specific for the eukaryotic Trk system.; GO: 0015079 potassium ion transmembrane transporter activity, 0006813 potassium ion transport, 0016021 integral to membrane.
Probab=32.87 E-value=23 Score=12.75 Aligned_cols=28 Identities=18% Similarity=0.431 Sum_probs=11.7
Q ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Q ss_conf 989999999---9899999999889999996
Q gi|254780323|r 180 EATRFYATF---GLVGNVGLIFAGGIVKTFS 207 (491)
Q Consensus 180 qaKRlf~li---~~g~~ig~i~gg~~~~~l~ 207 (491)
.+.-++|++ ++.+++|..+.+-.+-.+.
T Consensus 820 ~sp~wW~fft~~SaF~nlGL~LTp~SM~sF~ 850 (1197)
T TIGR00934 820 VSPTWWGFFTAMSAFANLGLTLTPDSMVSFN 850 (1197)
T ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCH
T ss_conf 8505688899999985378875866544111
No 151
>TIGR00805 oat sodium-independent organic anion transporter; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced . Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane.
Probab=32.07 E-value=23 Score=12.65 Aligned_cols=39 Identities=8% Similarity=0.150 Sum_probs=31.7
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999864098998999999998999999998899999963
Q gi|254780323|r 170 QFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSK 208 (491)
Q Consensus 170 ~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~ 208 (491)
++..|.-..+.+.++.|++..+..+|-++|=.+...-.+
T Consensus 196 sy~ddf~~~~~sply~gi~~~~~v~GP~~G~llgS~~~~ 234 (723)
T TIGR00805 196 SYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQ 234 (723)
T ss_pred CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 411125664442379999999999889999999877675
No 152
>PRK12405 electron transport complex RsxE subunit; Provisional
Probab=29.33 E-value=26 Score=12.32 Aligned_cols=101 Identities=16% Similarity=0.219 Sum_probs=62.3
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998329989999999999999999999999997899997316789999999999999999999841012346667873
Q gi|254780323|r 298 EKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVI 377 (491)
Q Consensus 298 ~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~ 377 (491)
..++...|++-....|.--+-+.++++.+++|=+.+.+.+..|+...+.++=...
T Consensus 57 sllr~~ip~~iRip~fI~vIAs~Vt~v~~~l~a~~p~Ly~~LGIflpLIvvNCiI------------------------- 111 (224)
T PRK12405 57 SLLRNWIPKEIRIPIFVMIIASFVTVVQLLMNAYAYGLYQSLGIFIPLIVTNCII------------------------- 111 (224)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------
T ss_conf 9999974066789999999999999999999996199999999999999999999-------------------------
Q ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 002079999999999999998763446466877752269767365777678887646677799999999998300002
Q gi|254780323|r 378 KLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATF 455 (491)
Q Consensus 378 ~~~~l~~~v~~~~i~~~~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~~~~ 455 (491)
.-|+=-|+--+| ..+++.||++.-.|-+..=+....+-.+++.++.
T Consensus 112 -----------------LgRaEafA~kn~---------------~~~s~~Dglg~GlGft~~L~~lg~iREllG~Gtl 157 (224)
T PRK12405 112 -----------------LGRAEAFASKNG---------------VLLSALDGLGMGLGFTLALVVLGAIREILGNGTL 157 (224)
T ss_pred -----------------HHHHHHHHHHCC---------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf -----------------988999998099---------------5789999999999899999999999999827861
No 153
>TIGR00791 gntP transporter, gluconate:H+ symporter (GntP) family; InterPro: IPR003474 This is a family of integral membrane permeases that are involved in gluconate uptake. Escherichia coli contains several members of this family including GntU, a low affinity transporter and GntT, a high affinity transporter .; GO: 0015128 gluconate transmembrane transporter activity, 0015725 gluconate transport, 0016020 membrane.
Probab=28.16 E-value=27 Score=12.18 Aligned_cols=242 Identities=15% Similarity=0.247 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH-HH
Q ss_conf 999999999998640989989999999989999999988-----999999630123224899999999999999999-99
Q gi|254780323|r 162 VMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAG-----GIVKTFSKLTNELMIYYSMLTLILSSILLMAVY-RW 235 (491)
Q Consensus 162 ~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~ 235 (491)
+.+++.| +. +.-.+..=-|=--|..++-...-+.+=| .+++.+.-..|. .+.+.....+-..+++.-++ +.
T Consensus 122 LLiPlvF-~I-A~~~~i~ll~l~iPm~AAl~v~H~fLPPhPGP~~iA~~~gAD~G~-vllYG~ivaIPtvi~AGPlf~Kf 198 (458)
T TIGR00791 122 LLIPLVF-SI-AREAKISLLKLGIPMVAALSVAHGFLPPHPGPTAIANEYGADIGE-VLLYGLIVAIPTVIIAGPLFTKF 198 (458)
T ss_pred HHHHHHH-HH-HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999-99-999578755678889999998741379682789999985662668-99999999988999987889988
Q ss_pred HHHHCCCCCCC-----CCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--
Q ss_conf 99840245223-----32000011234578889999998309679999999999999999999999999998329989--
Q gi|254780323|r 236 MNLYVLTDPQQ-----YSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQN-- 308 (491)
Q Consensus 236 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~~~~~-- 308 (491)
..++.+.++++ ...+++.-++++=+||.-|+-. -++-+.+|. +.|+.|-.. .++..+|..
T Consensus 199 l~~~~~~~p~k~G~I~~l~~~~~~~e~~mPSFG~S~~t-----~llPviLM~-----~~TIa~~~~---~k~~~~~~~~~ 265 (458)
T TIGR00791 199 LKRIVPPKPEKEGNIASLGSEKTFSEEEMPSFGVSLFT-----ALLPVILMA-----VKTIAELTL---PKGGLADSTAY 265 (458)
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-----HHHHHHHHH-----HHHHHHHHH---HHHCCCCHHHH
T ss_conf 74104788999986513234466772347502589999-----999999999-----999999874---54202403699
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Q ss_conf 9999999999999999999999-97-------899997316789999999999999999999841012346667873---
Q gi|254780323|r 309 SYAQFMGQFIQWTGIVTIVFMI-LG-------SNILKSFRWFTSAIITPLMILITGGGFFVFVIFEDALLPFTEDVI--- 377 (491)
Q Consensus 309 ~~~af~g~~~~~v~i~tii~ql-l~-------~~ll~r~G~~~~l~i~Pi~~li~~~~ff~~~~~~~~~~~~~~~~~--- 377 (491)
+..+|.|+=....=+..++..+ ++ .++.+.+|-......+ +++++++.+-|=-.+-+...........
T Consensus 266 ~~~~FiGnp~~Am~IA~lvA~y~lG~~rg~~~~~vmd~~~~ai~~IA~-~LLIIGgGGaFKQvL~dSGvG~yia~l~~g~ 344 (458)
T TIGR00791 266 EVVEFIGNPITAMLIAVLVAIYTLGIRRGMPMDQVMDSCGSAIKSIAM-ILLIIGGGGAFKQVLIDSGVGDYIAELLSGM 344 (458)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHEECCCHHHHHHHHHHCC
T ss_conf 999994585899999999999996451589988999999878988888-6466420211112200056678999996178
Q ss_pred HCCHHHHHHHHHHHHHHHHHH------H-----HHHHHHHHHH-HHHEECCHHHH
Q ss_conf 002079999999999999998------7-----6344646687-77522697673
Q gi|254780323|r 378 KLVPLALAVFLGSLQNVLSKA------T-----KYTMFDSTKE-MAFIPLDDEFR 420 (491)
Q Consensus 378 ~~~~l~~~v~~~~i~~~~~k~------~-----kYsl~~p~~E-~l~~pl~~~~R 420 (491)
..+|..++.-++++.+...-+ + .-++-.|.-| +++.-+|++.=
T Consensus 345 ~~sP~lmAW~~Aa~lRia~GSATVAa~ta~Giisaa~V~P~~~qL~~~~~~pAl~ 399 (458)
T TIGR00791 345 NLSPILMAWLIAAILRIALGSATVAALTAAGIISAALVAPLLGQLLYSGVNPALL 399 (458)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 9658999999999999996269999999999999999987775523789899999
No 154
>PRK04125 murein hydrolase regulator LrgA; Provisional
Probab=27.94 E-value=27 Score=12.15 Aligned_cols=91 Identities=19% Similarity=0.338 Sum_probs=40.4
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 9999998640989989999999989999999988999999630123-224899999999999999999999984024522
Q gi|254780323|r 167 MFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTNE-LMIYYSMLTLILSSILLMAVYRWMNLYVLTDPQ 245 (491)
Q Consensus 167 ~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 245 (491)
+|=.+...+-..++-++-=.+.- .+++..+=|..+....+..-- ............+.+..+....+..+...++.+
T Consensus 44 Lfi~L~~~iikle~Ve~~~~fLl--~~m~lfFVPagVGim~~~~ll~~~~~~il~i~ivSTilvm~vTG~v~Q~l~~r~~ 121 (141)
T PRK04125 44 LFVLLCTKVVKLEQVESLGTALT--NNIGFLFVPSGISVINSLGVMSQYPVQIILVIIVATILLLACTGLFSQFILGKTE 121 (141)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999979972999998999999--8707988522758999999999875899999999999999999999999998742
Q ss_pred CCCCCCCCCCCCCC
Q ss_conf 33200001123457
Q gi|254780323|r 246 QYSPKRGSVKKKLK 259 (491)
Q Consensus 246 ~~~~~~~~~~~~~~ 259 (491)
....++.+++++.+
T Consensus 122 kk~~~~~e~~~~~~ 135 (141)
T PRK04125 122 KEKEDKKEKKVKIK 135 (141)
T ss_pred CCHHHHHHHHHHCC
T ss_conf 01233678888614
No 155
>PRK09292 Na(+)-translocating NADH-quinone reductase subunit D; Validated
Probab=25.82 E-value=29 Score=11.88 Aligned_cols=52 Identities=21% Similarity=0.192 Sum_probs=38.5
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999832998999999999999999999999999789999731678999999
Q gi|254780323|r 298 EKVRQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITP 349 (491)
Q Consensus 298 ~~~~~~~~~~~~~~af~g~~~~~v~i~tii~qll~~~ll~r~G~~~~l~i~P 349 (491)
..++...|++-....|.--+-+.++++.+++|=+.+.+-+..|+...+.++=
T Consensus 60 sllr~~ip~~iRi~~fi~vIA~~Vt~ve~~l~a~~~~Ly~~LGiflpLIvtN 111 (208)
T PRK09292 60 SLIRNHIPNSVRIIVQMTIIASLVIVVDQVLKAYAYDISKQLSVFVGLIITN 111 (208)
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999877446789999999999999999999997298999999889999999
No 156
>TIGR02707 butyr_kinase butyrate kinase; InterPro: IPR011245 This group represents bacterial butyrate kinase, an enzyme that facilitates the formation of butyryl-CoA by phosphorylating butyrate in the presence of ATP to form butyryl phosphate . The final steps in butyrate synthesis by anaerobic bacteria can occur via butyrate kinase and phosphotransbutyrylase or via butyryl-CoA:acetate CoA-transferase, the latter providing the dominant route for butyrate formation in human colonic bacteria .; GO: 0005524 ATP binding, 0047761 butyrate kinase activity, 0016310 phosphorylation, 0005737 cytoplasm.
Probab=24.17 E-value=31 Score=11.65 Aligned_cols=22 Identities=27% Similarity=0.404 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6577767888764667779999
Q gi|254780323|r 421 TKGKAVVDVIGGRMAKSGGAVI 442 (491)
Q Consensus 421 ~k~K~~iD~~~~r~Gk~~gs~~ 442 (491)
-|+|-..|.++|+++|.+|..-
T Consensus 267 ~kA~~ildAMaYQiAKeIG~ma 288 (353)
T TIGR02707 267 EKAKLILDAMAYQIAKEIGKMA 288 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHCCE
T ss_conf 8899999865458756774250
No 157
>KOG4112 consensus
Probab=22.98 E-value=33 Score=11.49 Aligned_cols=37 Identities=16% Similarity=0.123 Sum_probs=23.2
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9864098998999999998999999998899999963
Q gi|254780323|r 172 ANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSK 208 (491)
Q Consensus 172 ~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~ 208 (491)
--|.=..+-|.|++-+|-..+.+-+.+=|+.+..++.
T Consensus 15 ~iDf~gQkkaEr~~q~ilti~aiVg~i~Gf~~Qqls~ 51 (101)
T KOG4112 15 PIDFPGQKKAERFQQLILTIGAIVGFIYGFAQQQLSV 51 (101)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6567523789999999999999999999999999889
No 158
>TIGR01998 PTS-II-BC-nag PTS system, N-acetylglucosamine-specific IIBC component; InterPro: IPR010974 This entry represents the combined B and C domains of the PTS transport system enzyme II specific for N-acetylglucosamine transport . Many of the genes in this family also include an A domain as part of the same polypeptide and thus should be given the name 'PTS system, N-acetylglucosamine-specific IIABC component'. This family is most closely related to the glucose-specific PTS enzymes.; GO: 0005351 sugar:hydrogen ion symporter activity, 0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity, 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane, 0019866 organelle inner membrane.
Probab=22.30 E-value=34 Score=11.39 Aligned_cols=75 Identities=17% Similarity=0.352 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHH--------CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 999999999999963--------389999999999999999999999842100146523455553101013445787655
Q gi|254780323|r 74 SAILFTILYMKLSNI--------LETEKLFYVVVSFFVSFFAIFAFLLYPYRDFLHPSPESIRALASSWPYLKWFIYLAG 145 (491)
Q Consensus 74 ~s~~~~~~y~~l~~~--------~~~~~l~~~~~~~f~~~~~~f~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (491)
..++.-..|+|.++. ++-+|++|+...|+++...+...
T Consensus 151 ~GlIaa~~YNrfs~~~LP~~LaFFsGKRLVPI~agf~~~vl~~~l~---------------------------------- 196 (571)
T TIGR01998 151 AGLIAAALYNRFSEVKLPEALAFFSGKRLVPIMAGFVGLVLAAVLG---------------------------------- 196 (571)
T ss_pred HHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH----------------------------------
T ss_conf 9899998630001010003550116872589999999999999999----------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 579999999999999999999999999864098998999999998999999998899999963
Q gi|254780323|r 146 KWSFALFYVFAELWGAVMINLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSK 208 (491)
Q Consensus 146 ~w~~~~fYv~~e~~~~~vis~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~ 208 (491)
|+|..+.+-++ .| =..|..-|.+|+.+=|..-+.+-.
T Consensus 197 -------~~WP~~~~gi~---~~----------------g~~i~~~G~lG~~iYG~~NRLLIP 233 (571)
T TIGR01998 197 -------YVWPLVYGGIV---AF----------------GESISGLGALGAGIYGFLNRLLIP 233 (571)
T ss_pred -------HHHHHHHHHHH---HH----------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -------88378999999---86----------------568775211015899999876402
No 159
>pfam08349 DUF1722 Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.
Probab=22.30 E-value=34 Score=11.39 Aligned_cols=16 Identities=38% Similarity=0.459 Sum_probs=6.3
Q ss_pred CCCCHHHHHHHHHHHH
Q ss_conf 9720147789999999
Q gi|254780323|r 1 MAHNQKILSVLLKIWQ 16 (491)
Q Consensus 1 ~~~~~~~~~~~~~l~~ 16 (491)
|||+|+....++|+.+
T Consensus 5 mahsq~~y~~LG~lva 20 (117)
T pfam08349 5 MAHSQQIYRELGRLVA 20 (117)
T ss_pred EECCHHHHHHHHHHHH
T ss_conf 3279999999999984
No 160
>TIGR00945 tatC twin arginine-targeting protein translocase TatC; InterPro: IPR002033 Proteins encoded by the mttABC operon (formerly yigTUW), mediate a novel Sec-independent membrane targeting and translocation system in Escherichia coli that interacts with cofactor-containing redox proteins having a S/TRRXFLK "twin arginine" leader motif. This family contains the Escherichia coli mttB gene (TATC) . A functional Tat system or Delta pH-dependent pathway requires three integral membrane proteins: TatA/Tha4, TatB/Hcf106 and TatC/cpTatC. The TatC protein is essential for the function of both pathways. It might be involved in twin-arginine signal peptide recognition, protein translocation and proton translocation. Sequence analysis predicts that TatC contains six transmembrane helices (TMHs), and experimental data confirmed that N and C termini of TatC or cpTatC are exposed to the cytoplasmic or stromal face of the membrane. The cytoplasmic N terminus and the first cytoplasmic loop region of the Escherichia coli TatC protein are essential for protein export. At least two TatC molecules co-exist within each Tat translocon , ..
Probab=22.16 E-value=34 Score=11.37 Aligned_cols=40 Identities=20% Similarity=0.199 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999864098998999999998999999998899999
Q gi|254780323|r 164 INLMFWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKT 205 (491)
Q Consensus 164 is~~FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~ 205 (491)
+.+|.|.|..=-...+|-|-..|++- ++.+....|..-++
T Consensus 81 ~lYQ~w~Fi~PGLy~~Err~~~pl~~--~S~~LF~~G~~FaY 120 (226)
T TIGR00945 81 ILYQIWAFILPGLYEHERRLLLPLLL--GSILLFLAGLAFAY 120 (226)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_conf 99999999801001899999999999--99999999999999
No 161
>PRK13109 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=22.13 E-value=34 Score=11.37 Aligned_cols=32 Identities=9% Similarity=0.098 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHEECCHHHHHHHHHH
Q ss_conf 99987634464668777522697673657776
Q gi|254780323|r 395 LSKATKYTMFDSTKEMAFIPLDDEFRTKGKAV 426 (491)
Q Consensus 395 ~~k~~kYsl~~p~~E~l~~pl~~~~R~k~K~~ 426 (491)
..|..|=|-.+.-+|.=-+-=||+.|.|-|..
T Consensus 218 ~~k~lkMskqEvK~E~K~~EGdP~iK~r~R~~ 249 (358)
T PRK13109 218 WRRSLRMTKQEIKDEHKQAEGDPSVKARLRSL 249 (358)
T ss_pred HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 99864899999999988663999999999999
No 162
>TIGR02872 spore_ytvI sporulation integral membrane protein YtvI; InterPro: IPR014227 This entry contains the sporulation protein YtvI. Three lines of evidence show this protein to be involved in sporulation. First, it is under control of a sporulation-specific sigma factor, sigma-E . Second, mutation leads to a sporulation defect. Third, it is found in exactly those genomes whose bacteria are capable of sporulation, except that it is absent in Clostridium acetobutylicum ATCC 824. YtvI has extensive hydrophobic regions and is likely to be an integral membrane protein..
Probab=21.43 E-value=35 Score=11.27 Aligned_cols=51 Identities=22% Similarity=0.316 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5446799999999999999999999996338999999999999999999999984
Q gi|254780323|r 60 AEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLY 114 (491)
Q Consensus 60 ~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~f~~~~~~f~~~l~ 114 (491)
+-..|++ .++..+.++.|..+++.+|.+.+|....+..+ ..++.+++.+++
T Consensus 21 p~~~Pf~---~Al~~A~~l~P~V~~L~~k~~~pR~lav~i~l-~~f~~~~~~~l~ 71 (350)
T TIGR02872 21 PYSLPFV---IALILALILEPAVRFLEKKLKLPRALAVLIVL-LIFLGIIGGLLY 71 (350)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHH
T ss_conf 9999999---99999999704478999862588507899999-999999999999
No 163
>TIGR01404 FlhB_rel_III type III secretion protein, YscU/HrpY family; InterPro: IPR006307 This is one of several families of proteins related to bacterial flagellar biosynthesis proteins and involved in bacterial type III protein secretion systems. This family is homologous to, but distinguished from, the flagellar biosynthetic protein FlhB (IPR006136 from INTERPRO). This model may not identify all type III secretion system FlhB homologs. ; GO: 0006810 transport, 0016021 integral to membrane.
Probab=21.36 E-value=35 Score=11.26 Aligned_cols=51 Identities=14% Similarity=0.058 Sum_probs=35.2
Q ss_pred CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 123457888999999830967999999999999999999999999999832
Q gi|254780323|r 254 VKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLY 304 (491)
Q Consensus 254 ~~~~~~~~~~~~~k~i~~s~yL~~l~~~v~~~~~~~tl~e~~~k~~~~~~~ 304 (491)
+.+-.+.|..+|+|.+++-|=+.-+.=.++=--..+.+++..|+....+.+
T Consensus 115 Kpd~~klNP~~glK~IFS~rs~~El~Ks~lK~~~~a~~~~~~~~~~~~~l~ 165 (346)
T TIGR01404 115 KPDLSKLNPISGLKRIFSLRSLIELLKSILKVVALALIFYLFLKNYLEELF 165 (346)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 668101383532467767764999999999999999999999997499999
No 164
>PRK07157 acetate kinase; Provisional
Probab=20.61 E-value=37 Score=11.14 Aligned_cols=24 Identities=4% Similarity=0.090 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 577767888764667779999999
Q gi|254780323|r 422 KGKAVVDVIGGRMAKSGGAVIQSF 445 (491)
Q Consensus 422 k~K~~iD~~~~r~Gk~~gs~~~~~ 445 (491)
++|-++|.+++|+.|-+|+.....
T Consensus 293 ~A~lA~d~f~yri~k~IGa~aa~L 316 (398)
T PRK07157 293 EASFALDLYAQKIVDYLANYANKI 316 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999999999999999999983
No 165
>TIGR00967 3a0501s007 preprotein translocase, SecY subunit; InterPro: IPR002208 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component. . From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone protein (SecB), an ATPase (SecA), an integral membrane complex (SecCY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) . The chaperone protein SecB is a highly acidic homotetrameric protein that exists as a "dimer of dimers" in the bacterial cytoplasm. SecB maintains preproteins in an unfolded state after translation, and targets these to the peripheral membrane protein ATPase SecA for secretion . The structure of the Escherichia coli SecYEG assembly revealed a sandwich of two membranes interacting through the extensive cytoplasmic domains . Each membrane is composed of dimers of SecYEG. The monomeric complex contains 15 transmembrane helices. The eubacterial secY protein interacts with the signal sequences of secretory proteins as well as with two other components of the protein translocation system: secA and secE. SecY is an integral plasma membrane protein of 419 to 492 amino acid residues that apparently contains 10 transmembrane (TM), 6 cytoplasmic and 5 periplasmic regions. Cytoplasmic regions 2 and 3, and TM domains 1, 2, 4, 5, 7 and 10 are well conserved: the conserved cytoplasmic regions are believed to interact with cytoplasmic secretion factors, while the TM domains may participate in protein export . Homologs of secY are found in archaebacteria . SecY is also encoded in the chloroplast genome of some algae where it could be involved in a prokaryotic-like protein export system across the two membranes of the chloroplast endoplasmic reticulum (CER) which is present in chromophyte and cryptophyte algae.; GO: 0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity, 0009306 protein secretion, 0016020 membrane.
Probab=20.53 E-value=37 Score=11.13 Aligned_cols=73 Identities=15% Similarity=0.116 Sum_probs=31.6
Q ss_pred HEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 52269767365777678887646677799999999998300-00233---379999999999999999999970899998
Q gi|254780323|r 412 FIPLDDEFRTKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPM-ATFSS---IVPYLAVFFLCLMFIWIYVVNQLSKEYTQL 487 (491)
Q Consensus 412 ~~pl~~~~R~k~K~~iD~~~~r~Gk~~gs~~~~~l~~~~~~-~~~~~---~~~~~~~~~i~i~~~Wi~~~~~L~~~y~~~ 487 (491)
++|==|.-|.-.+--++.+-+|+-- .||...+.+...=.. ..... ..-.++...++++ +.+++..-|+-++.
T Consensus 406 ~IPG~RpG~~~T~~yl~~~l~RLt~-~Gs~fLg~ia~~P~~~~~~~~~lp~~~~lGGTSlLI~---VgVa~~t~~q~~~~ 481 (489)
T TIGR00967 406 FIPGIRPGKEVTEKYLKRVLNRLTF-VGSLFLGLIAILPNFLEAIGGVLPQSKGLGGTSLLIV---VGVAIDTMKQLESY 481 (489)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_conf 4386458657999999766335789-9999999999999999998864200112224899999---99999999999999
Q ss_pred H
Q ss_conf 5
Q gi|254780323|r 488 I 488 (491)
Q Consensus 488 i 488 (491)
.
T Consensus 482 ~ 482 (489)
T TIGR00967 482 L 482 (489)
T ss_pred H
T ss_conf 8
No 166
>pfam06592 DUF1138 Protein of unknown function (DUF1138). This family consists of several hypothetical short plant proteins from Arabidopsis thaliana and Oryza sativa. The function of this family is unknown.
Probab=20.51 E-value=35 Score=11.28 Aligned_cols=16 Identities=19% Similarity=0.262 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999
Q gi|254780323|r 157 ELWGAVMINLMFWQFA 172 (491)
Q Consensus 157 e~~~~~vis~~FW~~~ 172 (491)
++-+++.+++.++.+.
T Consensus 7 sl~gsfa~ay~cd~~i 22 (73)
T pfam06592 7 SLAGSFAIAYVCDHYI 22 (73)
T ss_pred EHHHHHHHHHHHHHHH
T ss_conf 0555778998878887
No 167
>COG4792 EscU Type III secretory pathway, component EscU [Intracellular trafficking and secretion]
Probab=20.39 E-value=37 Score=11.11 Aligned_cols=130 Identities=19% Similarity=0.261 Sum_probs=64.5
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 112-3279999999999999999999987788651248544679999999999999999999999633899999999999
Q gi|254780323|r 23 MSE-AKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGAEIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSF 101 (491)
Q Consensus 23 ~~E-~~~~~~~~~~~F~i~~~y~~lr~~rd~l~~~~~g~e~lp~l~~~~~l~~s~~~~~~y~~l~~~~~~~~l~~~~~~~ 101 (491)
-.| ...+...++..++.+++++.....++.+-.+. .-.++||-+..-.....++-...| ++--..-- .+...
T Consensus 26 S~Eivs~v~~~al~~yf~l~g~~~~~~~~~ll~~~~-~~~n~PF~~Al~~il~~ll~~~l~--~v~pl~~~----~~v~t 98 (349)
T COG4792 26 SKEIVSAVQLLALVAYFMLFGDSYFEHLVELLLFTI-ELLNLPFSYALRQILGALLEELLY--LVLPLLLV----VIVAT 98 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHH--HHHHHHHH----HHHHH
T ss_conf 899999999999999999852899999999994289-983684999999999999999999--99999999----99999
Q ss_pred HHHHHHHHHHHH-----HHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999998-----42100146523455553101013445787655579999999999999999999999999864
Q gi|254780323|r 102 FVSFFAIFAFLL-----YPYRDFLHPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRI 175 (491)
Q Consensus 102 f~~~~~~f~~~l-----~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~fYv~~e~~~~~vis~~FW~~~n~~ 175 (491)
...-..-.|+++ -|+.+.++|-.... -+++ +-+++=..-+++-.+++|..||=+.-..
T Consensus 99 v~s~v~q~Gfl~a~eai~p~~~kINP~~~~K-----------~ifS-----~rS~vEl~KS~lKV~vLslif~f~l~~~ 161 (349)
T COG4792 99 VLSGVLQVGFLFALEAIKPKAEKINPVQNAK-----------RIFS-----LRSVVELLKSLLKVVVLSLIFWFMLHGY 161 (349)
T ss_pred HHHHHHHHEEEEEECCCCCCCCCCCHHHHHH-----------HHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9998866102575035688622068534178-----------8973-----9999999999999999999999999988
No 168
>CHL00024 psbI photosystem II protein I
Probab=20.05 E-value=37 Score=11.06 Aligned_cols=18 Identities=39% Similarity=0.624 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999
Q gi|254780323|r 94 LFYVVVSFFVSFFAIFAF 111 (491)
Q Consensus 94 l~~~~~~~f~~~~~~f~~ 111 (491)
++.++...|-+.+++||+
T Consensus 6 ifVYtvV~fFvslFiFGf 23 (36)
T CHL00024 6 LFVYTVVIFFVSLFIFGF 23 (36)
T ss_pred EHHHHHHHHHHHHHHHHH
T ss_conf 407999999999998863
Done!