HHsearch alignment for GI: 254780323 and conserved domain: pfam03137
>pfam03137 OATP Organic Anion Transporter Polypeptide (OATP) family. This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules). Thus, Tamai et al. initiated the current scheme of using digits for rat OATPs and letters for human ones. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. Thi
Probab=97.22 E-value=0.024 Score=36.28 Aligned_cols=175 Identities=14% Similarity=0.117 Sum_probs=89.5
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CCCHHHH--HHHHHHHHHHHHH
Q ss_conf 99999864098998999999998999999998899999963012--------------3224899--9999999999999
Q gi|254780323|r 168 FWQFANRITKTEEATRFYATFGLVGNVGLIFAGGIVKTFSKLTN--------------ELMIYYS--MLTLILSSILLMA 231 (491)
Q Consensus 168 FW~~~n~~f~~~qaKRlf~li~~g~~ig~i~gg~~~~~l~~~~~--------------~~~~~~~--~~~~~~~~~~~~~ 231 (491)
T Consensus 160 G~tYiDdnv~~~~s~~Yigi~~~~~~lGP~~Gf~lg~~~L~~yvd~~~~~~~~~~i~~~dprWvGAWWLGfli~g~~~~~ 239 (582)
T pfam03137 160 GISYIDDNVKSKNSPLYLGILFTLAMFGPAIGFLLGSFCLRLYVDFGRVPTEDVIITPTDPRWVGAWWLGFLVCGGLLLL 239 (582)
T ss_pred CCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 61143167774557199999999987646899999998885001556688654667878814777888899999999999
Q ss_pred HHH--HHHHHCCCCCCC-----------C-CCCCCCCCCCC-------CCCHHHHHHHHHCCHHHHHHHHHHHHHH-HHH
Q ss_conf 999--999840245223-----------3-20000112345-------7888999999830967999999999999-999
Q gi|254780323|r 232 VYR--WMNLYVLTDPQQ-----------Y-SPKRGSVKKKL-------KLSVLESLRMALNSKYLGYLVLLVICYG-TAI 289 (491)
Q Consensus 232 l~~--~~~~~~~~~~~~-----------~-~~~~~~~~~~~-------~~~~~~~~k~i~~s~yL~~l~~~v~~~~-~~~ 289 (491)
T Consensus 240 ~aipl~~FPk~Lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~Ll~N~~~m~~~l~~~~~~~~~~ 319 (582)
T pfam03137 240 SAIPFFFFPKELPKAGRLASLDLTRPKAKDETRKQAEEPKSGKSAPRFLKDFPKSLKRLLTNPTFMLVVLAQIFESSVIA 319 (582)
T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999838511584032211221002331022320233333320115577899999999759199999999999999998
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999832998999999999999999999999-999789999731678999
Q gi|254780323|r 290 NLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGIVTIVF-MILGSNILKSFRWFTSAI 346 (491)
Q Consensus 290 tl~e~~~k~~~~~~~~~~~~~~af~g~~~~~v~i~tii~-qll~~~ll~r~G~~~~l~ 346 (491)
T Consensus 320 G~~tF~pK-ylE~qF~~sas~A~~l~G---~i~vp~~~~G~llGG~ivkk~kl~~~~~ 373 (582)
T pfam03137 320 GYSTFLPK-YLETQYGQSASYANFLTG---VVALPAAAVGILIGGYIIKKFKLTARGM 373 (582)
T ss_pred HHHHHHHH-HHHHHHCCCHHHHHHHHH---HHHHHHHHHHHHHHHHEEEECCCCHHHH
T ss_conf 89887578-889882887899999998---7888888999875432132207678999