RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780323|ref|YP_003064736.1| ATP/ADP translocase
[Candidatus Liberibacter asiaticus str. psy62]
         (491 letters)



>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal
           domain {Clostridium acetobutylicum [TaxId: 1488]}
          Length = 141

 Score = 25.8 bits (56), Expect = 7.2
 Identities = 12/120 (10%), Positives = 25/120 (20%), Gaps = 6/120 (5%)

Query: 264 ESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKVRQLYPTQNSYAQFMGQFIQWTGI 323
           E +R    +K     + +                           +          +   
Sbjct: 23  ELIRRIRRAKIAKQKIQVFKPEIDNRY--SKEDVVSHMGEKEQAVAIKNSREILKYFEED 80

Query: 324 VTIVFMILGSNILKSFRWFTSAIITPLMILITGG--GFFVFVIFED--ALLPFTEDVIKL 379
             ++ +              + I      +I  G    F    F     L+   E V K+
Sbjct: 81  TEVIAIDEVQFFDDEIVEIVNKIAESGRRVICAGLDMDFRGKPFGPIPELMAIAEFVDKI 140


>d1d9qa_ e.7.1.1 (A:) Fructose-1,6-bisphosphatase {Garden pea (Pisum
           sativum) [TaxId: 3888]}
          Length = 340

 Score = 25.7 bits (56), Expect = 9.9
 Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 27/84 (32%)

Query: 338 SFRWFTSAIITPLMILITGGGFFVFV-----------IFEDALLPF------------TE 374
           S R+  S +      L+ GG +               ++E A + F             +
Sbjct: 249 SARYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQ 308

Query: 375 DVIKLVPLAL----AVFLGSLQNV 394
            V+ + P  +     +++GS + V
Sbjct: 309 RVLDIQPTEIHQRVPLYIGSTEEV 332


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.331    0.142    0.436 

Gapped
Lambda     K      H
   0.267   0.0418    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,789,821
Number of extensions: 82392
Number of successful extensions: 268
Number of sequences better than 10.0: 1
Number of HSP's gapped: 266
Number of HSP's successfully gapped: 21
Length of query: 491
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 402
Effective length of database: 1,185,626
Effective search space: 476621652
Effective search space used: 476621652
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)