BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= gi|254780323|ref|YP_003064736.1| ATP/ADP translocase [Candidatus Liberibacter asiaticus str. psy62] (491 letters) Database: las_proteome 1233 sequences; 328,796 total letters Searching...................................................done >gi|254780323|ref|YP_003064736.1| ATP/ADP translocase [Candidatus Liberibacter asiaticus str. psy62] Length = 491 Score = 989 bits (2558), Expect = 0.0, Method: Compositional matrix adjust. Identities = 491/491 (100%), Positives = 491/491 (100%) Query: 1 MAHNQKILSVLLKIWQVFCAVKMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGA 60 MAHNQKILSVLLKIWQVFCAVKMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGA Sbjct: 1 MAHNQKILSVLLKIWQVFCAVKMSEAKKFIPMTLMMFLVLFNFSTLRPIKDSLVVPHMGA 60 Query: 61 EIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFL 120 EIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFL Sbjct: 61 EIISFVKLWCVFPSAILFTILYMKLSNILETEKLFYVVVSFFVSFFAIFAFLLYPYRDFL 120 Query: 121 HPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEE 180 HPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEE Sbjct: 121 HPSPESIRALASSWPYLKWFIYLAGKWSFALFYVFAELWGAVMINLMFWQFANRITKTEE 180 Query: 181 ATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYV 240 ATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYV Sbjct: 181 ATRFYATFGLVGNVGLIFAGGIVKTFSKLTNELMIYYSMLTLILSSILLMAVYRWMNLYV 240 Query: 241 LTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKV 300 LTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKV Sbjct: 241 LTDPQQYSPKRGSVKKKLKLSVLESLRMALNSKYLGYLVLLVICYGTAINLVEGPWKEKV 300 Query: 301 RQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFF 360 RQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFF Sbjct: 301 RQLYPTQNSYAQFMGQFIQWTGIVTIVFMILGSNILKSFRWFTSAIITPLMILITGGGFF 360 Query: 361 VFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFR 420 VFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFR Sbjct: 361 VFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDSTKEMAFIPLDDEFR 420 Query: 421 TKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVNQL 480 TKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVNQL Sbjct: 421 TKGKAVVDVIGGRMAKSGGAVIQSFIFMLFPMATFSSIVPYLAVFFLCLMFIWIYVVNQL 480 Query: 481 SKEYTQLISKE 491 SKEYTQLISKE Sbjct: 481 SKEYTQLISKE 491 >gi|254781011|ref|YP_003065424.1| orotate phosphoribosyltransferase [Candidatus Liberibacter asiaticus str. psy62] Length = 228 Score = 26.2 bits (56), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 11/109 (10%) Query: 300 VRQLYPTQNSYAQFMGQFIQWTGIVTIVFMI-LGSNILKSFRWFTSAIITPLMILITGGG 358 VR+ +Q G + ++ I ++ LG+++ + F I I+ G G Sbjct: 106 VRKKSKKHGQKSQIEGHLFKGARVLVIEDLVTLGNSMFE----FVKVIRDSGGIIQDGIG 161 Query: 359 FFVFVIFEDALLPFTEDVIKLVPLALAVFLGSLQNVLSKATKYTMFDST 407 F + IF + F E+ IKL +L + ++L+ A K +F+ Sbjct: 162 LFFYDIFPEVPARFRENNIKL------HYLATWNDILTIAEKLKIFNHD 204 >gi|254781112|ref|YP_003065525.1| putative amino acid-binding periplasmic ABC transporter protein [Candidatus Liberibacter asiaticus str. psy62] Length = 274 Score = 23.5 bits (49), Expect = 7.9, Method: Compositional matrix adjust. Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 2/30 (6%) Query: 90 ETEKLFYVVVSFFVSFFAIFA--FLLYPYR 117 + K+F+ FF FF +F+ F++YP+R Sbjct: 7 DLRKIFFSKYLFFAPFFILFSYYFVIYPFR 36 Database: las_proteome Posted date: Jun 5, 2011 6:30 PM Number of letters in database: 328,796 Number of sequences in database: 1233 Lambda K H 0.331 0.142 0.436 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 291,042 Number of Sequences: 1233 Number of extensions: 11468 Number of successful extensions: 49 Number of sequences better than 100.0: 11 Number of HSP's better than 100.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 43 Number of HSP's gapped (non-prelim): 12 length of query: 491 length of database: 328,796 effective HSP length: 78 effective length of query: 413 effective length of database: 232,622 effective search space: 96072886 effective search space used: 96072886 T: 11 A: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 40 (20.0 bits)