HHsearch alignment for GI: 254780325 and conserved domain: PRK03759
>PRK03759 isopentenyl-diphosphate delta-isomerase; Provisional.
Probab=99.69 E-value=7.7e-16 Score=111.71 Aligned_cols=112 Identities=26% Similarity=0.416 Sum_probs=82.6
Q ss_pred EEEEEEEEEEECCCEEEEEEECCCC-CCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEE-EEEEEECCCCC
Q ss_conf 4999999999359869999917898-88983822-573101787488999988887626520244202-55665205788
Q gi|254780325|r 9 ILLVVACAVFEPGGKVLLSCRPKDK-SHGEFWEF-PGGKIEDGETPEEALTRELFEELAIVVKPFSLV-PLTFISHPYEK 85 (141)
Q Consensus 9 ~~~vv~~~ii~~~~~iLl~~R~~~~-~~~g~W~l-PGG~ve~gEs~~~a~~REv~EEtgi~~~~~~~~-~~~~~~~~~~~ 85 (141)
T Consensus 33 lHRafsv~l~~~~g~lllq~Rs~~K~~~pg~w~~s~~gH~~~gE~~~~aa~R~l~EElGi~~~~l~~~~~~f~Y~a~~~~ 112 (184)
T PRK03759 33 LHLAFSCYLFDADGRLLVTRRALSKKTWPGVWTNSCCGHPQPGESLEDAIIRRCREELGVEITDLTLVLPDFRYRATDPN 112 (184)
T ss_pred EEEEEEEEEECCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCC
T ss_conf 38899999995999699997158973799940035446789998999999999999869883444055003899723899
Q ss_pred C---EEEEEEEEEEEECCE--ECCCHHHEEEECCHHHHCCC
Q ss_conf 6---069999999975483--76882331570277883248
Q gi|254780325|r 86 F---HLLMPFFVCHCFEGI--PQSCEGQQLQWVALDDLQNY 121 (141)
Q Consensus 86 ~---~~~~~~~~~~~~~~~--~~~~E~~~~~Wi~~~el~~~ 121 (141)
T Consensus 113 g~~E~E~~~Vf~~~~-d~~~~pnp~EV~e~~Wv~~~eL~~~ 152 (184)
T PRK03759 113 GIVENEVCPVFAARA-TSALQPNPDEVMDYQWVDPADLLRA 152 (184)
T ss_pred CCCEEEEEEEEEEEE-CCCCCCCHHHHEEEEEECHHHHHHH
T ss_conf 862257999999984-8989899689134689869999999