HHsearch alignment for GI: 254780325 and conserved domain: cd03431

>cd03431 DNA_Glycosylase_C DNA glycosylase (MutY in bacteria and hMYH in humans) is responsible for repairing misread A*oxoG residues to C*G by removing the inappropriately paired adenine base from the DNA backbone. It belongs to the Nudix hydrolase superfamily and is important for the repair of various genotoxic lesions. Enzymes belonging to this superfamily requires a divalent cation, such as Mg2+ or Mn2+ for their activity. They are also recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V). However, DNA glycosylase does not seem to contain this signature motif. DNA glycosylase consists of 2 domains: the N-terminal domain contains the catalytic properties of the enzyme and the C-terminal domain affects substrate (oxoG) binding and enzymatic turnover. The C-terminal domain is highly similar to MutT, based on secondary structure and topology, despite low sequence identity. MutT sanitizes the nucleotide precursor pool by hydrolyzing oxo-dGTP to
Probab=99.57  E-value=3.2e-14  Score=102.37  Aligned_cols=114  Identities=26%  Similarity=0.513  Sum_probs=93.1

Q ss_pred             EEEEEEECCCEEEEEEECCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEE
Q ss_conf             99999935986999991789888983822573101787488999988887626520244202556652057886069999
Q gi|254780325|r   13 VACAVFEPGGKVLLSCRPKDKSHGEFWEFPGGKIEDGETPEEALTRELFEELAIVVKPFSLVPLTFISHPYEKFHLLMPF   92 (141)
Q Consensus        13 v~~~ii~~~~~iLl~~R~~~~~~~g~W~lPGG~ve~gEs~~~a~~REv~EEtgi~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (141)
T Consensus         5 ~~~~ii~~~~~iLl~kRp~~Gll~gLwefP~~e~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~H~fSH~~l~~~~   79 (118)
T cd03431           5 IAVVVIRNDGRVLLEKRPEKGLLAGLWEFPSVEWEEEADGEEALLSALKKALRLSL-----EPLGTVKHTFTHFRLTLHV   79 (118)
T ss_pred             EEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-----CCCCEEEEEECCEEEEEEE
T ss_conf             99999977999999988999845653007866556564627999876665530122-----1044041342417999999


Q ss_pred             EEEEEECCEECCCHHHEEEECCHHHHCCCCCCCCCHHHHHHH
Q ss_conf             999975483768823315702778832488973698999999
Q gi|254780325|r   93 FVCHCFEGIPQSCEGQQLQWVALDDLQNYSMLPADLSLISFL  134 (141)
Q Consensus        93 ~~~~~~~~~~~~~E~~~~~Wi~~~el~~~~~~~~~~~ii~~l  134 (141)
T Consensus        80 ~~~~~~~~~~~---~~~~~Wv~~~~l~~~~~p~~~~Kil~~l  118 (118)
T cd03431          80 YLARLEGDLLA---PDEGRWVPLEELDEYALPTVMRKILELL  118 (118)
T ss_pred             EEEEECCCCCC---CCCCEEEEHHHCCCCCCCHHHHHHHHHC
T ss_conf             99996379878---9888997678854068987999999759