HHsearch alignment for GI: 254780325 and conserved domain: cd03676

>cd03676 Nudix_hydrolase_3 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belong to this superfamily requires a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate spe
Probab=99.24  E-value=3.1e-10  Score=79.36  Aligned_cols=116  Identities=22%  Similarity=0.327  Sum_probs=79.4

Q ss_pred             EEEEEEECCCC-CCCCCEE-CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC-EEEEEEEEC--CCCC--C-EEEEEEEE
Q ss_conf             69999917898-8898382-25731017874889999888876265202442-025566520--5788--6-06999999
Q gi|254780325|r   23 KVLLSCRPKDK-SHGEFWE-FPGGKIEDGETPEEALTRELFEELAIVVKPFS-LVPLTFISH--PYEK--F-HLLMPFFV   94 (141)
Q Consensus        23 ~iLl~~R~~~~-~~~g~W~-lPGG~ve~gEs~~~a~~REv~EEtgi~~~~~~-~~~~~~~~~--~~~~--~-~~~~~~~~   94 (141)
T Consensus        49 ~lWv~rRs~~K~~~Pg~~D~~vaGg~~~g~~~~~~~~rE~~EEagi~~~l~~~~~~~G~isy~~~~~~~gl~~e~~~vYd  128 (180)
T cd03676          49 RIWIPRRSPTKATWPGMLDNLVAGGLGHGEGPEETLVKECDEEAGLPEDLVRQLKPVGVVSYLREGEAGGLQPEVEYVYD  128 (180)
T ss_pred             EEEEECCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCEECEEEEEEEECCCCCCCCCEEEEEE
T ss_conf             99986268987789975301111366799899999999999881999899831551117999987687773553899999


Q ss_pred             EEEECC-EECCC--HHHEEEECCHHHHCC----CCCCC-CCHHHHHHHHHHC
Q ss_conf             997548-37688--233157027788324----88973-6989999998721
Q gi|254780325|r   95 CHCFEG-IPQSC--EGQQLQWVALDDLQN----YSMLP-ADLSLISFLRKHA  138 (141)
Q Consensus        95 ~~~~~~-~~~~~--E~~~~~Wi~~~el~~----~~~~~-~~~~ii~~l~~~~  138 (141)
T Consensus       129 l~lp~d~~P~~~DGEVe~F~l~~v~ev~~~l~~g~Fkpn~alviiDfliRhG  180 (180)
T cd03676         129 LELPPDFIPAPQDGEVESFRLLTIDEVLRALKEGEFKPNCALVTLDFLIRHG  180 (180)
T ss_pred             EEECCCCEECCCCCCEEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
T ss_conf             9828996057999866369996599999999739976520889776684069