HHsearch alignment for GI: 254780325 and conserved domain: cd04664
>cd04664 Nudix_Hydrolase_7 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate s
Probab=99.89 E-value=1.2e-22 Score=150.98 Aligned_cols=120 Identities=25% Similarity=0.341 Sum_probs=90.3
Q ss_pred EEEEEEEEEEECCCEEEEEEECCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEE----EEEECCCC
Q ss_conf 49999999993598699999178988898382257310178748899998888762652024420255----66520578
Q gi|254780325|r 9 ILLVVACAVFEPGGKVLLSCRPKDKSHGEFWEFPGGKIEDGETPEEALTRELFEELAIVVKPFSLVPL----TFISHPYE 84 (141)
Q Consensus 9 ~~~vv~~~ii~~~~~iLl~~R~~~~~~~g~W~lPGG~ve~gEs~~~a~~REv~EEtgi~~~~~~~~~~----~~~~~~~~ 84 (141)
T Consensus 3 ~v~vv-~~~~~~~~~vLll~Rs~~--~~G~W~~p~G~ve~gE~~~~aA~REi~EETGl~~~~~~~~~~~~~~~~~~~~~~ 79 (129)
T cd04664 3 SVLVV-PYRLTGEGRVLLLRRSDK--YAGFWQSVTGGIEDGESPAEAARREVAEETGLDPERLTLLDRGASIAFVEFTDN 79 (129)
T ss_pred EEEEE-EEEECCCCEEEEEECCCC--CCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCC
T ss_conf 89999-999889998999987999--989391987322899799999999999988898301799861458999996589
Q ss_pred CCEEEEEEEEEEEECCE-EC-CCHHHEEEECCHHHHCCCCCCCCCHHHH
Q ss_conf 86069999999975483-76-8823315702778832488973698999
Q gi|254780325|r 85 KFHLLMPFFVCHCFEGI-PQ-SCEGQQLQWVALDDLQNYSMLPADLSLI 131 (141)
Q Consensus 85 ~~~~~~~~~~~~~~~~~-~~-~~E~~~~~Wi~~~el~~~~~~~~~~~ii 131 (141)
T Consensus 80 ~~~~~~~~f~~~v~~~~~v~l~~EH~~~~W~~~~ea~~~l~~~~~r~a~ 128 (129)
T cd04664 80 GRVWTEHPFAFHLPSDAVVTLDWEHDAFEWVPPEEAAALLLWESNRRAW 128 (129)
T ss_pred CEEEEEEEEEEECCCCCCCCCCCCCCCEEECCHHHHHHHCCCHHHHHHH
T ss_conf 8589999999986789877687444721883699999765993366875