HHsearch alignment for GI: 254780325 and conserved domain: cd04666
>cd04666 Nudix_Hydrolase_9 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate s
Probab=99.42 E-value=3.2e-12 Score=90.87 Aligned_cols=104 Identities=20% Similarity=0.240 Sum_probs=66.8
Q ss_pred EEEEEEECC-C--EEEEEEECCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC-EEEEEEEECCCC--CC
Q ss_conf 999999359-8--69999917898889838225731017874889999888876265202442-025566520578--86
Q gi|254780325|r 13 VACAVFEPG-G--KVLLSCRPKDKSHGEFWEFPGGKIEDGETPEEALTRELFEELAIVVKPFS-LVPLTFISHPYE--KF 86 (141)
Q Consensus 13 v~~~ii~~~-~--~iLl~~R~~~~~~~g~W~lPGG~ve~gEs~~~a~~REv~EEtgi~~~~~~-~~~~~~~~~~~~--~~ 86 (141)
T Consensus 3 agal~~r~~~g~~eVLLItsr~~----~rWilPKG~~e~~es~~~aA~REa~EEAGv~g~i~~~~lG~~~y~k~~~~~~~ 78 (122)
T cd04666 3 AGAIPYRETGGEVEVLLVTSRRT----GRWIVPKGGPEKDESPAEAAAREAWEEAGVRGKIGKRPLGRFEYRKRSKNRPP 78 (122)
T ss_pred EEEEEEEECCCCEEEEEEEECCC----CEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCC
T ss_conf 99999997399089999992699----94998875367998999998888887429488886758889999982799853
Q ss_pred EEEEEEEEEEEECCEECCCH--HHEEEECCHHHHCC
Q ss_conf 06999999997548376882--33157027788324
Q gi|254780325|r 87 HLLMPFFVCHCFEGIPQSCE--GQQLQWVALDDLQN 120 (141)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~E--~~~~~Wi~~~el~~ 120 (141)
T Consensus 79 ~~~V~~f~~~V~~~~~~wpE~~~R~R~W~s~~eA~~ 114 (122)
T cd04666 79 RCEVAVFPLEVTEELDEWPEMHQRKRKWFSPEEAAL 114 (122)
T ss_pred CEEEEEEEEEEEEECCCCCCCCCEEEEECCHHHHHH
T ss_conf 199999999998511259975867999938999998