HHsearch alignment for GI: 254780325 and conserved domain: cd04666

>cd04666 Nudix_Hydrolase_9 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate s
Probab=99.42  E-value=3.2e-12  Score=90.87  Aligned_cols=104  Identities=20%  Similarity=0.240  Sum_probs=66.8

Q ss_pred             EEEEEEECC-C--EEEEEEECCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC-EEEEEEEECCCC--CC
Q ss_conf             999999359-8--69999917898889838225731017874889999888876265202442-025566520578--86
Q gi|254780325|r   13 VACAVFEPG-G--KVLLSCRPKDKSHGEFWEFPGGKIEDGETPEEALTRELFEELAIVVKPFS-LVPLTFISHPYE--KF   86 (141)
Q Consensus        13 v~~~ii~~~-~--~iLl~~R~~~~~~~g~W~lPGG~ve~gEs~~~a~~REv~EEtgi~~~~~~-~~~~~~~~~~~~--~~   86 (141)
T Consensus         3 agal~~r~~~g~~eVLLItsr~~----~rWilPKG~~e~~es~~~aA~REa~EEAGv~g~i~~~~lG~~~y~k~~~~~~~   78 (122)
T cd04666           3 AGAIPYRETGGEVEVLLVTSRRT----GRWIVPKGGPEKDESPAEAAAREAWEEAGVRGKIGKRPLGRFEYRKRSKNRPP   78 (122)
T ss_pred             EEEEEEEECCCCEEEEEEEECCC----CEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCC
T ss_conf             99999997399089999992699----94998875367998999998888887429488886758889999982799853


Q ss_pred             EEEEEEEEEEEECCEECCCH--HHEEEECCHHHHCC
Q ss_conf             06999999997548376882--33157027788324
Q gi|254780325|r   87 HLLMPFFVCHCFEGIPQSCE--GQQLQWVALDDLQN  120 (141)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~E--~~~~~Wi~~~el~~  120 (141)
T Consensus        79 ~~~V~~f~~~V~~~~~~wpE~~~R~R~W~s~~eA~~  114 (122)
T cd04666          79 RCEVAVFPLEVTEELDEWPEMHQRKRKWFSPEEAAL  114 (122)
T ss_pred             CEEEEEEEEEEEEECCCCCCCCCEEEEECCHHHHHH
T ss_conf             199999999998511259975867999938999998