HHsearch alignment for GI: 254780325 and conserved domain: cd04674
>cd04674 Nudix_Hydrolase_16 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate
Probab=99.78 E-value=1.2e-18 Score=127.84 Aligned_cols=107 Identities=23% Similarity=0.243 Sum_probs=75.3
Q ss_pred EEEEEEECCCEEEEEEECCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEE
Q ss_conf 99999935986999991789888983822573101787488999988887626520244202556652057886069999
Q gi|254780325|r 13 VACAVFEPGGKVLLSCRPKDKSHGEFWEFPGGKIEDGETPEEALTRELFEELAIVVKPFSLVPLTFISHPYEKFHLLMPF 92 (141)
Q Consensus 13 v~~~ii~~~~~iLl~~R~~~~~~~g~W~lPGG~ve~gEs~~~a~~REv~EEtgi~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (141)
T Consensus 6 vv~~~~~~~d~vLl~rR~~~P~~-G~w~lPgGf~e~gEt~~~aa~RE~~EEtgl~v~~~~~~Lf~--v~s~p~~~~~~~~ 82 (118)
T cd04674 6 VVVALLPVDDGLLVIRRGIEPGR-GKLALPGGFIELGETWQDAVARELLEETGVAVDPADIRLFD--VRSAPDGTLLVFG 82 (118)
T ss_pred EEEEEEEECCEEEEEEECCCCCC-CCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEE--CCCCCCEEEEEEE
T ss_conf 89999997999999985999888-85848753754999999999999999768511614017987--1546843799999
Q ss_pred EEEEEECCE-E---CCCHHHEEEECCHHHHCCCCCC
Q ss_conf 999975483-7---6882331570277883248897
Q gi|254780325|r 93 FVCHCFEGI-P---QSCEGQQLQWVALDDLQNYSML 124 (141)
Q Consensus 93 ~~~~~~~~~-~---~~~E~~~~~Wi~~~el~~~~~~ 124 (141)
T Consensus 83 ~l~~~~~~dlp~f~pt~Es~e~~l~~~p~--eLAFP 116 (118)
T cd04674 83 LLPERRAADLPPFEPTDETTERAVVTAPS--ELAFP 116 (118)
T ss_pred EEHHHCCCCCCCCCCCCCEEEEEEECCCC--CCCCC
T ss_conf 83100124368989883303369516744--44667