HHsearch alignment for GI: 254780325 and conserved domain: cd04691
>cd04691 Nudix_Hydrolase_32 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate
Probab=99.95 E-value=1e-27 Score=180.26 Aligned_cols=112 Identities=29% Similarity=0.452 Sum_probs=91.3
Q ss_pred EEEEEEEEECCCEEEEEEECCC-CCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEE
Q ss_conf 9999999935986999991789-888983822573101787488999988887626520244202556652057886069
Q gi|254780325|r 11 LVVACAVFEPGGKVLLSCRPKD-KSHGEFWEFPGGKIEDGETPEEALTRELFEELAIVVKPFSLVPLTFISHPYEKFHLL 89 (141)
Q Consensus 11 ~vv~~~ii~~~~~iLl~~R~~~-~~~~g~W~lPGG~ve~gEs~~~a~~REv~EEtgi~~~~~~~~~~~~~~~~~~~~~~~ 89 (141)
T Consensus 1 hVVagii-~~~~kvLl~rR~~~~~~~~G~WefPGGkvE~gEt~~~Al~REl~EElgI~v~~~~~~--~~~~~~~~~~~-~ 76 (117)
T cd04691 1 HGVVGVL-FSDDKVLLERRSLTKNADPGKLNIPGGHIEAGESQEEALLREVQEELGVDPLSYTYL--CSLYHPTSELQ-L 76 (117)
T ss_pred CEEEEEE-EECCEEEEEECCCCCCCCCCEEECCEECCCCCCCHHHHHHHHHHHHHCEEEECCEEE--EEEEECCCCEE-E
T ss_conf 9799999-989999999889999999996989745177988999999999889819156224589--99985599969-9
Q ss_pred EEEEEEEEECCEECCCHHHEEEECCHHHHCCCCCCCCCH
Q ss_conf 999999975483768823315702778832488973698
Q gi|254780325|r 90 MPFFVCHCFEGIPQSCEGQQLQWVALDDLQNYSMLPADL 128 (141)
Q Consensus 90 ~~~~~~~~~~~~~~~~E~~~~~Wi~~~el~~~~~~~~~~ 128 (141)
T Consensus 77 l~~~~~~~~~G~~~~~E~~e~~Wv~~~el~~~--~~ad~ 113 (117)
T cd04691 77 LHYYVVTFWQGEIPAQEAAEVHWMTANDIVLA--SEADR 113 (117)
T ss_pred EEEEEEEEECCEECCCCCCCCEECCHHHCCCC--CCCCC
T ss_conf 99999999817664334770577169995386--44551