HHsearch alignment for GI: 254780326 and conserved domain: COG1364
>COG1364 ArgJ N-acetylglutamate synthase (N-acetylornithine aminotransferase) [Amino acid transport and metabolism].
Probab=100.00 E-value=0 Score=1122.60 Aligned_cols=402 Identities=46% Similarity=0.695 Sum_probs=389.7
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 47688778987874747999998031018894699999489986999832577853434888887235880299993787
Q gi|254780326|r 9 FMLQSHVSPVLLPIKGVRLSAAALGIKYVGRDDVFLMVFDNPASVAGVFTRSSCPSAPVDFCKGNLSHGIARALIVNSGI 88 (416)
Q Consensus 9 ~~~~~~~~p~l~~i~Gf~~~~~~aGiK~~~r~DL~li~~~~pa~~AgvFT~N~~~AAPV~~~k~~l~~~~~raivvNSGn 88 (416)
T Consensus 2 ~~~~~~~~~~i~~p~Gf~~~g~~aGiK~~g~~Dl~li~se~~~~aAgVFT~n~~~AAPV~~~~~~l~~~~~rAiVvNSGn 81 (404)
T COG1364 2 VNLMPKIAGGITAPKGFLAAGIAAGIKASGKPDLGLIVSERPASAAGVFTTNKVKAAPVDVSRENLADGKLRAIVVNSGN 81 (404)
T ss_pred CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEHHHHHHCCCCEEEEEECCCC
T ss_conf 86421125898997647876214211248998879999468852688875165440663165676445854899974677
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCC-HHHHHHHHHHHHCCCCCCC
Q ss_conf 223414798999999999998764987330887114310224320222210012223458-3226888876431565752
Q gi|254780326|r 89 ANAFTGKRGRDTVRFIAKAVSELIPCKEEEVYVASTGIIGEFLDVALFDGVLSKMLCDAT-DDAWLDSAKAMMTTDRYAK 167 (416)
Q Consensus 89 ANA~TG~~G~~~a~~~~~~~a~~l~~~~~~Vl~~STGVIG~~Lp~~ki~~~i~~l~~~l~-~~~~~~aA~AImTTDt~pK 167 (416)
T Consensus 82 ANa~TG~~G~~dA~~~a~~~A~~l~~~~~~V~vaSTGVIG~~Lpmdki~~gi~~~~~~l~~~~~~~~aa~AImTTDT~pK 161 (404)
T COG1364 82 ANACTGEQGLKDAREMAEAVAEELGIEEEEVLVASTGVIGERLPMDKILAGIEKLVSDLGSEDGWLEAAEAIMTTDTVPK 161 (404)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCE
T ss_conf 45556577899999999999987099953079950442387378799997489987541575457999756214687620
Q ss_pred EEEEEEEECCCEEEEEEEEECCHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECC
Q ss_conf 24668875696289999850200024345225889996564399999999998600555414316765644228996326
Q gi|254780326|r 168 VAVRTVDIDGIRVTINGLAKGAGMIAPDMATTLAFVVTDINISPAVLQNILSEGAEYSFNSITVDGDTSTSDTLLLFATG 247 (416)
Q Consensus 168 ~~~~~~~i~g~~v~i~GiaKGsGMI~PnMATML~fi~TDa~i~~~~L~~~L~~~v~~SFN~IsVDGDtSTNDtv~l~AnG 247 (416)
T Consensus 162 ~~~~~~~~~~-~vti~GiAKGsGMI~PnMATML~Fi~TDA~i~~~~Lq~~L~~~~~~TFN~itVDGDTSTNDtv~llAnG 240 (404)
T COG1364 162 QAAVEAEIGG-TVTIGGIAKGSGMIHPNMATMLAFITTDAAIEPAALQKALRRAVDKTFNMITVDGDTSTNDTVLLLANG 240 (404)
T ss_pred EEEEEECCCC-EEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCC
T ss_conf 4799961696-499988863466578478877777542775898999999999875257449874888713657654357
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHCCC
Q ss_conf 53467777688877779988887889999999986226300213799998248999999999877357156655550678
Q gi|254780326|r 248 TVLGNFAPITDVSDKRLSLFRPALFDLLKDLALQVVCDGEGASKLLEVTVKGAADCASAKKVALSIANSPLVKTAFASES 327 (416)
Q Consensus 248 ~~~~~~~~i~~~~~~~~~~f~~aL~~v~~~LA~~Iv~DGEGatk~i~v~V~gA~~~~~A~~ia~sIa~S~LvKtA~~G~D 327 (416)
T Consensus 241 ~~g~--~~i~~~~-~~~~~f~~al~~v~~~LAk~IvrDGEGATK~ieV~V~GA~~~~~A~~iA~~Ia~S~LVKTAvfG~D 317 (404)
T COG1364 241 ASGN--PEITEES-PDLAEFKEALTEVCQDLAKQIVRDGEGATKLIEVTVTGAASEEDARVIARAIANSPLVKTAVFGSD 317 (404)
T ss_pred CCCC--CCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHCCC
T ss_conf 6689--6555568-669999999999999999998642688628999999478998999999999846734655542679
Q ss_pred CCCHHHHHHHHCCCCCCCCHHHEEEEECCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCHHH
Q ss_conf 86244532220245776582334999899998717731878899999986254877999972689812899954587546
Q gi|254780326|r 328 FGWWGRIVMAVGKSGVLVDRDRLSVWFGDVRIANNGEPEINFSQESVRSIVKKKCVPITVDLQIGNGIHTVWTCDFSKEY 407 (416)
Q Consensus 328 pN~WGRI~aAiG~sg~~~d~~~i~i~ig~~~v~~~G~~~~~~~e~~~~~~~~~~~i~i~idLg~G~~~~t~~tcDLt~~Y 407 (416)
T Consensus 318 pN-WGRIi~AvG~sg~~~d~~~i~i~~~~~~~~~~G~~-~~~~~~~~~~~l~~~ei~I~VdLg~G~~~at~wgCDLt~dY 395 (404)
T COG1364 318 PN-WGRILAAVGYSGAEVDPDKISISFGGIVVADDGEP-LPFYEEAASAYLSQDEITIRVDLGVGDGAATAWGCDLTYDY 395 (404)
T ss_pred CC-HHHHHHHCCCCCCCCCHHHEEEEECCEEEEECCCC-CHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCHHH
T ss_conf 86-77888751046665583308999897999837977-83068999866232837999980567740279822576322
Q ss_pred EECCCCCCC
Q ss_conf 001146579
Q gi|254780326|r 408 IHFNSNVQS 416 (416)
Q Consensus 408 V~iNa~Yrs 416 (416)
T Consensus 396 V~INa~Yrt 404 (404)
T COG1364 396 VRINADYRT 404 (404)
T ss_pred EEEECEECC
T ss_conf 785034149