HHsearch alignment for GI: 254780326 and conserved domain: pfam01960

>pfam01960 ArgJ ArgJ family. Members of the ArgJ family catalyse the first EC:2.3.1.1 and fifth steps EC:2.3.1.35 in arginine biosynthesis.
Probab=100.00  E-value=0  Score=1144.61  Aligned_cols=387  Identities=48%  Similarity=0.735  Sum_probs=379.3

Q ss_pred             EEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf             79999980310188946999994899869998325778534348888872358802999937872234147989999999
Q gi|254780326|r   25 VRLSAAALGIKYVGRDDVFLMVFDNPASVAGVFTRSSCPSAPVDFCKGNLSHGIARALIVNSGIANAFTGKRGRDTVRFI  104 (416)
Q Consensus        25 f~~~~~~aGiK~~~r~DL~li~~~~pa~~AgvFT~N~~~AAPV~~~k~~l~~~~~raivvNSGnANA~TG~~G~~~a~~~  104 (416)
T Consensus         1 F~~~gv~aGiK~~~r~Dl~li~s~~~~~~AgvFT~n~~~AApV~~~~~~l~~~~~ravvvNSGnANA~TG~~G~~da~~~   80 (387)
T pfam01960         1 FRAAGVHAGIKKSGKKDLALIVSDVPATAAGVFTTNKFKAAPVLVSREHLKGGKARAVVVNSGNANACTGEQGLEDAREM   80 (387)
T ss_pred             CEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCEECCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
T ss_conf             96423785466599997899996799649998647852406769999874359805999915863000438899999999


Q ss_pred             HHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEE
Q ss_conf             99998764987330887114310224320222210012223458322688887643156575224668875696289999
Q gi|254780326|r  105 AKAVSELIPCKEEEVYVASTGIIGEFLDVALFDGVLSKMLCDATDDAWLDSAKAMMTTDRYAKVAVRTVDIDGIRVTING  184 (416)
Q Consensus       105 ~~~~a~~l~~~~~~Vl~~STGVIG~~Lp~~ki~~~i~~l~~~l~~~~~~~aA~AImTTDt~pK~~~~~~~i~g~~v~i~G  184 (416)
T Consensus        81 ~~~~a~~l~~~~~~Vlv~STGVIG~~lp~~~i~~~i~~~~~~l~~~~~~~aA~AImTTDt~pK~~~~~~~i~g~~v~i~G  160 (387)
T pfam01960        81 AELVAELLGIPPEEVLVASTGVIGEPLPMEKIRAGIPALVAALSADGWEDAARAIMTTDTFPKEAAREVEIGGKTVTIGG  160 (387)
T ss_pred             HHHHHHHHCCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEE
T ss_conf             99999984999640798215312662888999987899987548344899998774258740489999998998899999


Q ss_pred             EEECCHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHH
Q ss_conf             85020002434522588999656439999999999860055541431676564422899632653467777688877779
Q gi|254780326|r  185 LAKGAGMIAPDMATTLAFVVTDINISPAVLQNILSEGAEYSFNSITVDGDTSTSDTLLLFATGTVLGNFAPITDVSDKRL  264 (416)
Q Consensus       185 iaKGsGMI~PnMATML~fi~TDa~i~~~~L~~~L~~~v~~SFN~IsVDGDtSTNDtv~l~AnG~~~~~~~~i~~~~~~~~  264 (416)
T Consensus       161 iaKGsGMI~PnMATML~fi~TDa~i~~~~Lq~~L~~av~~SFN~ItVDGDtSTNDtv~llAnG~s~~--~~i~~-~~~~~  237 (387)
T pfam01960       161 IAKGSGMIHPNMATMLAFITTDAAISPELLQKALRRAVDRSFNRITVDGDTSTNDTVLVLANGAAGN--PPITE-GSPDY  237 (387)
T ss_pred             EECCCCCCCCCHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEEECCCCCC--CCCCC-CCHHH
T ss_conf             9645435786446456452005666999999999999986524142068778766799981465578--74777-99779


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCC
Q ss_conf             98888788999999998622630021379999824899999999987735715665555067886244532220245776
Q gi|254780326|r  265 SLFRPALFDLLKDLALQVVCDGEGASKLLEVTVKGAADCASAKKVALSIANSPLVKTAFASESFGWWGRIVMAVGKSGVL  344 (416)
Q Consensus       265 ~~f~~aL~~v~~~LA~~Iv~DGEGatk~i~v~V~gA~~~~~A~~ia~sIa~S~LvKtA~~G~DpN~WGRI~aAiG~sg~~  344 (416)
T Consensus       238 ~~f~~aL~~v~~~LA~~IvrDGEGATK~I~V~V~gA~s~~~A~~iA~sIa~S~LVKTAi~G~DpN-WGRI~~AiG~sg~~  316 (387)
T pfam01960       238 AAFQEALTEVCQELAKQIVRDGEGATKLIEVTVTGAASEEDARKVARAIANSPLVKTAIFGEDPN-WGRILAAVGYSGVD  316 (387)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCC-HHHHHHHCCCCCCC
T ss_conf             99999999999999998542668663489999927889999999999974486888998468988-88999870677776


Q ss_pred             CCHHHEEEEECCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCHHHEECCCCCCC
Q ss_conf             582334999899998717731878899999986254877999972689812899954587546001146579
Q gi|254780326|r  345 VDRDRLSVWFGDVRIANNGEPEINFSQESVRSIVKKKCVPITVDLQIGNGIHTVWTCDFSKEYIHFNSNVQS  416 (416)
Q Consensus       345 ~d~~~i~i~ig~~~v~~~G~~~~~~~e~~~~~~~~~~~i~i~idLg~G~~~~t~~tcDLt~~YV~iNa~Yrs  416 (416)
T Consensus       317 ~d~~~i~i~~g~~~v~~~G~~-~~~~e~~~~~~m~~~ei~I~vdLg~G~~~~t~wtcDLt~~YV~INa~YrT  387 (387)
T pfam01960       317 FDPDKVDISFGGVLVVENGEP-VDFDEEAASAILKEDEITIRVDLGLGDGSATAWTCDLSYDYVKINADYRT  387 (387)
T ss_pred             CCHHHEEEEECCEEEEECCCC-CCCCHHHHHHHHCCCEEEEEEEECCCCCCEEEEECCCCHHHHEECCCCCC
T ss_conf             675772999899999959946-88898999976478928999997888963899947588416067774369