HHsearch results for GI: 254780326 and protein with PDBid: 1vra_A

>1vra_A Arginine biosynthesis bifunctional protein ARGJ; 10175521, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans}
Probab=100.00  E-value=0  Score=480.22  Aligned_cols=187  Identities=34%  Similarity=0.458  Sum_probs=178.2

Q ss_pred             CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHC-CCCCEEEEEECCC
Q ss_conf             768877898787474799999803101889469999948998699983257785343488888723-5880299993787
Q gi|254780326|r   10 MLQSHVSPVLLPIKGVRLSAAALGIKYVGRDDVFLMVFDNPASVAGVFTRSSCPSAPVDFCKGNLS-HGIARALIVNSGI   88 (416)
Q Consensus        10 ~~~~~~~p~l~~i~Gf~~~~~~aGiK~~~r~DL~li~~~~pa~~AgvFT~N~~~AAPV~~~k~~l~-~~~~raivvNSGn   88 (416)
                      ++.+.....+..++||++++++||||++ |+||+||+++.||.+|||||||+|+||||+|||++|+ ++++|||||||||
T Consensus        21 ~~~~i~~g~vt~p~GF~~~gi~aGiK~~-r~DL~Li~~~~~~~~AgVFT~N~~~AAPV~~~r~~l~~~~~~raiivNSGN   99 (208)
T 1vra_A           21 NVLKLETGSVTSAKGFSAVGIHTGVKRK-RKDLGAIVCEVPASSAAVYTLNKVQAAPLKVTQESIAVEGKLQAMIVNSGI   99 (208)
T ss_dssp             CCEECTTCCGGGSTTEEEEEECCSSSSS-SCCEEEEEEEEEEEEEEEEBCCSSCCHHHHHHHHHHHHHSEEEEEEEEEEE
T ss_pred             CEEEECCCCEECCCCEEEEEEEECCCCC-CCCEEEEEECCCCEEEEEECCCCCEECCHHHHHHHHHCCCCEEEEEECCCC
T ss_conf             4578547878378857999899577789-988899996899559999758952713149999886304871799985677


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCE
Q ss_conf             22341479899999999999876498733088711431022432022221001222345832268888764315657522
Q gi|254780326|r   89 ANAFTGKRGRDTVRFIAKAVSELIPCKEEEVYVASTGIIGEFLDVALFDGVLSKMLCDATDDAWLDSAKAMMTTDRYAKV  168 (416)
Q Consensus        89 ANA~TG~~G~~~a~~~~~~~a~~l~~~~~~Vl~~STGVIG~~Lp~~ki~~~i~~l~~~l~~~~~~~aA~AImTTDt~pK~  168 (416)
                      ||||||++|++|++++++.+++.|+|++++||++||||||||||+++|.++|+++..+|+.++|++||+||||||||||.
T Consensus       100 ANA~TG~~G~~da~~~~~~~a~~l~i~~~~VlvaSTGVIG~~Lp~~~I~~~i~~l~~~l~~~~~~~aA~AImTTDt~pK~  179 (208)
T 1vra_A          100 ANACTGKRGLDDAYTMRAVGAETFHIPEHYVAVTSTGVIGEFLPMDVITNGIRQLKPEATIEGAHAFNEAILTTDTVEKH  179 (208)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHHHHTSCGGGEEEEEEEESSCCCCHHHHHHHHHHCCCBSSHHHHHHHHHHHCSSCSSCCE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf             44133787899999999987554154644505750243667689899988789887654166899998563189998705


Q ss_pred             EEEEEEECCCEEEEEEEEECCHHCCCCCC
Q ss_conf             46688756962899998502000243452
Q gi|254780326|r  169 AVRTVDIDGIRVTINGLAKGAGMIAPDMA  197 (416)
Q Consensus       169 ~~~~~~i~g~~v~i~GiaKGsGMI~PnMA  197 (416)
                      ++++++++|++++|+||||||||||||||
T Consensus       180 ~~~~~~i~g~~~~i~GIAKGsGMI~PNMA  208 (208)
T 1vra_A          180 TCYQTIVNGKTVTVGGVAKGSGMIHPNMA  208 (208)
T ss_dssp             EEEEEEETTEEEEEEEEEECSSSCCCCBC
T ss_pred             EEEEEEECCCEEEEEEEEEECCCCCCCCC
T ss_conf             89999989908999999806115684779