HHsearch results for GI: 254780326 and protein with PDBid: 3it4_A
>3it4_A Arginine biosynthesis bifunctional protein ARGJ alpha chain; ornithine acetyltransferase, structural genomics; 1.70A {Mycobacterium tuberculosis} PDB: 3it6_A
Probab=100.00 E-value=0 Score=467.40 Aligned_cols=178 Identities=35% Similarity=0.442 Sum_probs=167.9
Q ss_pred CCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCC-CEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCH
Q ss_conf 9878747479999980310188946999994899-869998325778534348888872358802999937872234147
Q gi|254780326|r 17 PVLLPIKGVRLSAAALGIKYVGRDDVFLMVFDNP-ASVAGVFTRSSCPSAPVDFCKGNLSHGIARALIVNSGIANAFTGK 95 (416)
Q Consensus 17 p~l~~i~Gf~~~~~~aGiK~~~r~DL~li~~~~p-a~~AgvFT~N~~~AAPV~~~k~~l~~~~~raivvNSGnANA~TG~ 95 (416)
..+..++||++++++||||+++|+||+||+++.| +.+|||||+|+|+||||+|||++++++++|+|||||||||||||+
T Consensus 14 ~gvt~p~Gf~~~~~~aGiK~~~k~Dl~Li~s~~p~~~~AgvFT~N~~~AAPV~~~k~~l~~~~~raiivNSGNANA~TG~ 93 (199)
T 3it4_A 14 QGVTAPAGFRAAGVAAGIKASGALDLALVFNEGPDYAAAGVFTRNQVKAAPVLWTQQVLTTGRLRAVILNSGGANACTGP 93 (199)
T ss_dssp CCTTSSTTEEEEEECCSCSTTCCCCEEEEEECCSCCBEEEEEBCCSSCCHHHHHHHHHHTTSBCSEEEEECSBCCCSCHH
T ss_pred CCEECCCEEEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEHHHHHHCCCCEEEEEEECCCCCCCCCH
T ss_conf 98855770799999975634999858999988999589999857822998650204543258638999966986542336
Q ss_pred HHHHHHHHHHHHHHHHCC-----CCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCH--HHHHHHHHHHHCCCCCCCE
Q ss_conf 989999999999987649-----873308871143102243202222100122234583--2268888764315657522
Q gi|254780326|r 96 RGRDTVRFIAKAVSELIP-----CKEEEVYVASTGIIGEFLDVALFDGVLSKMLCDATD--DAWLDSAKAMMTTDRYAKV 168 (416)
Q Consensus 96 ~G~~~a~~~~~~~a~~l~-----~~~~~Vl~~STGVIG~~Lp~~ki~~~i~~l~~~l~~--~~~~~aA~AImTTDt~pK~ 168 (416)
+|++|++++++.+++.|+ |+++|||++||||||||||+++|.++||++..+|.. .+|++||+||||||||||.
T Consensus 94 ~G~~~~~~~~~~~a~~l~~~~~~~~~~eVl~aSTGVIG~~Lp~~~i~~~i~~l~~~l~~~~~~~~~aA~AImTTDt~pK~ 173 (199)
T 3it4_A 94 AGFADTHATAEAVAAALSDWGTETGAIEVAVCSTGLIGDRLPMDKLLAGVAHVVHEMHGGLVGGDEAAHAIMTTDNVPKQ 173 (199)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCCCGGGEEEEEBSCSSCCCCHHHHHHHHHHHHHHCBSSHHHHHHHHHHTCSSCSSCEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCHHHHHHEEECCCCCEEE
T ss_conf 66999999999999985114666775248973565345648989997304110234321121519875224476886367
Q ss_pred EEEEEEECCCEEEEEEEEECCHHCCCCCC
Q ss_conf 46688756962899998502000243452
Q gi|254780326|r 169 AVRTVDIDGIRVTINGLAKGAGMIAPDMA 197 (416)
Q Consensus 169 ~~~~~~i~g~~v~i~GiaKGsGMI~PnMA 197 (416)
++.+ .+++++|.||||||||||||||
T Consensus 174 ~~~~---~~~~~~i~GiAKGsGMI~PnMA 199 (199)
T 3it4_A 174 VALH---HHDNWTVGGMAKGAGMLAPSLA 199 (199)
T ss_dssp EEEE---CTTSCEEEEEEECSSSCCCCBC
T ss_pred EEEE---CCCCEEEEEEEEEHHHCCCCCC
T ss_conf 9998---5994999999727511584779