HHsearch results for GI: 254780326 and protein with PDBid: 3it4_A

>3it4_A Arginine biosynthesis bifunctional protein ARGJ alpha chain; ornithine acetyltransferase, structural genomics; 1.70A {Mycobacterium tuberculosis} PDB: 3it6_A
Probab=100.00  E-value=0  Score=467.40  Aligned_cols=178  Identities=35%  Similarity=0.442  Sum_probs=167.9

Q ss_pred             CCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCC-CEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCH
Q ss_conf             9878747479999980310188946999994899-869998325778534348888872358802999937872234147
Q gi|254780326|r   17 PVLLPIKGVRLSAAALGIKYVGRDDVFLMVFDNP-ASVAGVFTRSSCPSAPVDFCKGNLSHGIARALIVNSGIANAFTGK   95 (416)
Q Consensus        17 p~l~~i~Gf~~~~~~aGiK~~~r~DL~li~~~~p-a~~AgvFT~N~~~AAPV~~~k~~l~~~~~raivvNSGnANA~TG~   95 (416)
                      ..+..++||++++++||||+++|+||+||+++.| +.+|||||+|+|+||||+|||++++++++|+|||||||||||||+
T Consensus        14 ~gvt~p~Gf~~~~~~aGiK~~~k~Dl~Li~s~~p~~~~AgvFT~N~~~AAPV~~~k~~l~~~~~raiivNSGNANA~TG~   93 (199)
T 3it4_A           14 QGVTAPAGFRAAGVAAGIKASGALDLALVFNEGPDYAAAGVFTRNQVKAAPVLWTQQVLTTGRLRAVILNSGGANACTGP   93 (199)
T ss_dssp             CCTTSSTTEEEEEECCSCSTTCCCCEEEEEECCSCCBEEEEEBCCSSCCHHHHHHHHHHTTSBCSEEEEECSBCCCSCHH
T ss_pred             CCEECCCEEEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEHHHHHHCCCCEEEEEEECCCCCCCCCH
T ss_conf             98855770799999975634999858999988999589999857822998650204543258638999966986542336


Q ss_pred             HHHHHHHHHHHHHHHHCC-----CCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCH--HHHHHHHHHHHCCCCCCCE
Q ss_conf             989999999999987649-----873308871143102243202222100122234583--2268888764315657522
Q gi|254780326|r   96 RGRDTVRFIAKAVSELIP-----CKEEEVYVASTGIIGEFLDVALFDGVLSKMLCDATD--DAWLDSAKAMMTTDRYAKV  168 (416)
Q Consensus        96 ~G~~~a~~~~~~~a~~l~-----~~~~~Vl~~STGVIG~~Lp~~ki~~~i~~l~~~l~~--~~~~~aA~AImTTDt~pK~  168 (416)
                      +|++|++++++.+++.|+     |+++|||++||||||||||+++|.++||++..+|..  .+|++||+||||||||||.
T Consensus        94 ~G~~~~~~~~~~~a~~l~~~~~~~~~~eVl~aSTGVIG~~Lp~~~i~~~i~~l~~~l~~~~~~~~~aA~AImTTDt~pK~  173 (199)
T 3it4_A           94 AGFADTHATAEAVAAALSDWGTETGAIEVAVCSTGLIGDRLPMDKLLAGVAHVVHEMHGGLVGGDEAAHAIMTTDNVPKQ  173 (199)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSCCCGGGEEEEEBSCSSCCCCHHHHHHHHHHHHHHCBSSHHHHHHHHHHTCSSCSSCEE
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCHHHHHHEEECCCCCEEE
T ss_conf             66999999999999985114666775248973565345648989997304110234321121519875224476886367


Q ss_pred             EEEEEEECCCEEEEEEEEECCHHCCCCCC
Q ss_conf             46688756962899998502000243452
Q gi|254780326|r  169 AVRTVDIDGIRVTINGLAKGAGMIAPDMA  197 (416)
Q Consensus       169 ~~~~~~i~g~~v~i~GiaKGsGMI~PnMA  197 (416)
                      ++.+   .+++++|.||||||||||||||
T Consensus       174 ~~~~---~~~~~~i~GiAKGsGMI~PnMA  199 (199)
T 3it4_A          174 VALH---HHDNWTVGGMAKGAGMLAPSLA  199 (199)
T ss_dssp             EEEE---CTTSCEEEEEEECSSSCCCCBC
T ss_pred             EEEE---CCCCEEEEEEEEEHHHCCCCCC
T ss_conf             9998---5994999999727511584779