RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= gi|254780326|ref|YP_003064739.1| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein [Candidatus Liberibacter asiaticus str. psy62] (416 letters) >1vz6_A Ornithine acetyl-transferase; clavulanic acid, N-acetyl- ornithine, N-acetyl-glutamate, antibiotic; 2.75A {Streptomyces clavuligerus} SCOP: d.154.1.2 PDB: 1vz7_A 1vz8_A Length = 393 Score = 278 bits (713), Expect = 1e-75 Identities = 137/402 (34%), Positives = 208/402 (51%), Gaps = 21/402 (5%) Query: 16 SPVLLPIKGVRLSAAALGIKYVGRDDVFLMVFDNPASVAGVFTRSSCPSAPVDFCKGNLS 75 S P +G + A +G+ GRDD ++ PA+V+ VFTRS V C+ ++ Sbjct: 4 STPKTP-RGFVVHTAPVGLADDGRDDFTVLASTAPATVSAVFTRSRFAGPSVVLCREAVA 62 Query: 76 HGIARALIVNSGIANAFTGKRGRDTVRFIAKAVSELIPCKEEEVYVASTGIIGEFLDVAL 135 G AR ++V + AN TG G + R + +AV+ + E E+ +ASTG+IG + Sbjct: 63 DGQARGVVVLARNANVATGLEGEENAREVREAVARALGLPEGEMLIASTGVIGRQYPMES 122 Query: 136 FDGVLSKMLCDATDDAWLDSAKAMMTTDRYAKVAVRTVDIDGIRVTINGLAKGAGMIAPD 195 L + A + + +A+A+MTTD + V + T+ G+AKG GM+ PD Sbjct: 123 IREHLKTLEWPAGEGGFDRAARAIMTTDTR----PKEVRVSVGGATLVGIAKGVGMLEPD 178 Query: 196 MATTLAFVVTDINISPAVLQNILSEGAEYSFNSITVDGDTSTSDTLLLFATGTVLGNFAP 255 MAT L F TD + PA + + +FN++++D DTSTSDT +LFA G A Sbjct: 179 MATLLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLAGEVDAG 238 Query: 256 ITDVSDKRLSLFRPALFDLLKDLALQVVCDGEGASKLLEVTVKGAADCASAKKVALSIAN 315 F AL L + DGEGA+KL+EV V GA D A AK+V ++ N Sbjct: 239 E----------FEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVN 288 Query: 316 SPLVKTAFASESFGWWGRIVMAVGKS--GVLVDRDRLSVWFGDVRIA---NNGEPEINFS 370 SPLVKTA WGR+ MA+GK +D++R+++ FG+V + G+ + Sbjct: 289 SPLVKTAVHGCDPN-WGRVAMAIGKCSDDTDIDQERVTIRFGEVEVYPPKARGDQADDAL 347 Query: 371 QESVRSIVKKKCVPITVDLQIGNGIHTVWTCDFSKEYIHFNS 412 + +V ++ V I +DL I +G TV+ CD ++ Y+ NS Sbjct: 348 RAAVAEHLRGDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNS 389 >3it4_B Arginine biosynthesis bifunctional protein ARGJ beta chain; ornithine acetyltransferase, structural genomics; 1.70A {Mycobacterium tuberculosis} PDB: 3it6_B Length = 205 Score = 194 bits (494), Expect = 3e-50 Identities = 68/215 (31%), Positives = 99/215 (46%), Gaps = 14/215 (6%) Query: 198 TTLAFVVTDINISPAVLQNILSEGAEYSFNSITVDGDTSTSDTLLLFATGTVLGNFAPIT 257 T L + TD PA L+ L A +F+ + +DG ST+DT+LL ++G Sbjct: 1 TMLCVLTTDAAAEPAALERALRRAAAATFDRLDIDGSCSTNDTVLLLSSGASE------- 53 Query: 258 DVSDKRLSLFRPALFDLLKDLALQVVCDGEGASKLLEVTVKGAADCASAKKVALSIANSP 317 + A+ + DL Q+ D EG +K + VTV GAA A A IA Sbjct: 54 --IPPAQADLDEAVLRVCDDLCAQLQADAEGVTKRVTVTVTGAATEDDALVAARQIARDS 111 Query: 318 LVKTAFASESFGWWGRIVMAVGKSGVLVDRDRLSVWFGDVRIANNGEPEINFSQESVRSI 377 LVKTA WGR++ AVG + + +D DR+SV F + +G + Sbjct: 112 LVKTALFGSDPN-WGRVLAAVGMAPITLDPDRISVSFNGAAVCVHGVGAPGAREV----D 166 Query: 378 VKKKCVPITVDLQIGNGIHTVWTCDFSKEYIHFNS 412 + + ITVDL +G+G + T D S Y+ NS Sbjct: 167 LSDADIDITVDLGVGDGQARIRTTDLSHAYVEENS 201 >1vra_A Arginine biosynthesis bifunctional protein ARGJ; 10175521, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans} Length = 208 Score = 179 bits (454), Expect = 1e-45 Identities = 64/177 (36%), Positives = 96/177 (54%), Gaps = 2/177 (1%) Query: 22 IKGVRLSAAALGIKYVGRDDVFLMVFDNPASVAGVFTRSSCPSAPVDFCKGNL-SHGIAR 80 KG G+K R D+ +V + PAS A V+T + +AP+ + ++ G + Sbjct: 33 AKGFSAVGIHTGVKR-KRKDLGAIVCEVPASSAAVYTLNKVQAAPLKVTQESIAVEGKLQ 91 Query: 81 ALIVNSGIANAFTGKRGRDTVRFIAKAVSELIPCKEEEVYVASTGIIGEFLDVALFDGVL 140 A+IVNSGIANA TGKRG D + +E E V V STG+IGEFL + + + Sbjct: 92 AMIVNSGIANACTGKRGLDDAYTMRAVGAETFHIPEHYVAVTSTGVIGEFLPMDVITNGI 151 Query: 141 SKMLCDATDDAWLDSAKAMMTTDRYAKVAVRTVDIDGIRVTINGLAKGAGMIAPDMA 197 ++ +AT + +A++TTD K ++G VT+ G+AKG+GMI P+MA Sbjct: 152 RQLKPEATIEGAHAFNEAILTTDTVEKHTCYQTIVNGKTVTVGGVAKGSGMIHPNMA 208 >1vra_B Arginine biosynthesis bifunctional protein ARGJ; 10175521, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans} Length = 215 Score = 174 bits (443), Expect = 3e-44 Identities = 82/215 (38%), Positives = 113/215 (52%), Gaps = 4/215 (1%) Query: 198 TTLAFVVTDINISPAVLQNILSEGAEYSFNSITVDGDTSTSDTLLLFATGTVLGNFAPIT 257 T L+FV TD NI LQ LS +FN ITVDGDTST+D +++ A+G Sbjct: 1 TMLSFVTTDANIDHGHLQGALSAITNETFNRITVDGDTSTNDMVVVMASGLAEN---ETL 57 Query: 258 DVSDKRLSLFRPALFDLLKDLALQVVCDGEGASKLLEVTVKGAADCASAKKVALSIANSP 317 + F AL +DLA Q+ DGEGA+KL+EV V GAA+ A VA I S Sbjct: 58 TPEHPDWANFYKALQLACEDLAKQIARDGEGATKLIEVEVTGAANDQEAGMVAKQIVGSD 117 Query: 318 LVKTAFASESFGWWGRIVMAVGKSGVLVDRDRLSVWFGDVRIANNGEPEINFSQESVRSI 377 LVKTA W GRI+ A+G SG V+++ + + G + EP +E+ + Sbjct: 118 LVKTAIYGADANW-GRIICAIGYSGCEVNQETIDIAIGPIVTLKQSEPTGFSEEEATAYL 176 Query: 378 VKKKCVPITVDLQIGNGIHTVWTCDFSKEYIHFNS 412 + V I+V+L IGNG W CD + +Y+ N+ Sbjct: 177 KEADPVKISVNLHIGNGTGKAWGCDLTYDYVRINA 211 >3it4_A Arginine biosynthesis bifunctional protein ARGJ alpha chain; ornithine acetyltransferase, structural genomics; 1.70A {Mycobacterium tuberculosis} PDB: 3it6_A Length = 199 Score = 162 bits (412), Expect = 9e-41 Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 11/183 (6%) Query: 23 KGVRLSAAALGIKYVGRDDVFLMVFDNP-ASVAGVFTRSSCPSAPVDFCKGNLSHGIARA 81 G R + A GIK G D+ L+ + P + AGVFTR+ +APV + + L+ G RA Sbjct: 20 AGFRAAGVAAGIKASGALDLALVFNEGPDYAAAGVFTRNQVKAAPVLWTQQVLTTGRLRA 79 Query: 82 LIVNSGIANAFTGKRGRDTVRFIAKAVSELI-----PCKEEEVYVASTGIIGEFLDVALF 136 +I+NSG ANA TG G A+AV+ + EV V STG+IG+ L + Sbjct: 80 VILNSGGANACTGPAGFADTHATAEAVAAALSDWGTETGAIEVAVCSTGLIGDRLPMDKL 139 Query: 137 DGVLSKML--CDATDDAWLDSAKAMMTTDRYAKVAVRTVDIDGIRVTINGLAKGAGMIAP 194 ++ ++ ++A A+MTTD K T+ G+AKGAGM+AP Sbjct: 140 LAGVAHVVHEMHGGLVGGDEAAHAIMTTDNVPKQVAL---HHHDNWTVGGMAKGAGMLAP 196 Query: 195 DMA 197 +A Sbjct: 197 SLA 199 >2v4i_B Glutamate N-acetyltransferase 2 beta chain; cytoplasm, acyl enzyme, NTN hydrolase, acyltransferase, ornithine acetyl transferase; 2.2A {Streptomyces clavuligerus} PDB: 2vzk_D* 2vzk_B* Length = 213 Score = 161 bits (407), Expect = 4e-40 Identities = 75/218 (34%), Positives = 111/218 (50%), Gaps = 16/218 (7%) Query: 200 LAFVVTDINISPAVLQNILSEGAEYSFNSITVDGDTSTSDTLLLFATGTVLGNFAPITDV 259 L F TD + PA + + +FN++++D DTSTSDT +LFA Sbjct: 3 LTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFAN----------GLA 52 Query: 260 SDKRLSLFRPALFDLLKDLALQVVCDGEGASKLLEVTVKGAADCASAKKVALSIANSPLV 319 + F AL L + DGEGA+KL+EV V GA D A AK+V ++ NSPLV Sbjct: 53 GEVDAGEFEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLV 112 Query: 320 KTAFASESFGWWGRIVMAVGKSGVLVDR--DRLSVWFGDVRI---ANNGEPEINFSQESV 374 KTA WGR+ MA+GK D +R+++ FG+V + G+ + + +V Sbjct: 113 KTAVHGCDPN-WGRVAMAIGKCSDDTDIDQERVTIRFGEVEVYPPKARGDQADDALRAAV 171 Query: 375 RSIVKKKCVPITVDLQIGNGIHTVWTCDFSKEYIHFNS 412 ++ V I +DL I +G TV+ CD ++ Y+ NS Sbjct: 172 AEHLRGDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNS 209 >2v4i_A Glutamate N-acetyltransferase 2 alpha chain; cytoplasm, acyl enzyme, NTN hydrolase, acyltransferase, ornithine acetyl transferase; 2.2A {Streptomyces clavuligerus} PDB: 2vzk_A* Length = 173 Score = 151 bits (383), Expect = 2e-37 Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 4/175 (2%) Query: 23 KGVRLSAAALGIKYVGRDDVFLMVFDNPASVAGVFTRSSCPSAPVDFCKGNLSHGIARAL 82 +G + A +G+ GRDD ++ PA+V+ VFTRS V C+ ++ G AR + Sbjct: 3 RGFVVHTAPVGLADDGRDDFTVLASTAPATVSAVFTRSRFAGPSVVLCREAVADGQARGV 62 Query: 83 IVNSGIANAFTGKRGRDTVRFIAKAVSELIPCKEEEVYVASTGIIGEFLDVALFDGVLSK 142 +V + AN TG G + R + +AV+ + E E+ +ASTG+IG + L Sbjct: 63 VVLARNANVATGLEGEENAREVREAVARALGLPEGEMLIASTGVIGRQYPMESIREHLKT 122 Query: 143 MLCDATDDAWLDSAKAMMTTDRYAKVAVRTVDIDGIRVTINGLAKGAGMIAPDMA 197 + A + + +A+A+MTTD K V + T+ G+AKG GM+ PDMA Sbjct: 123 LEWPAGEGGFDRAARAIMTTDTRPK----EVRVSVGGATLVGIAKGVGMLEPDMA 173 >2pff_B Fatty acid synthase subunit beta; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 2006 Score = 65.7 bits (160), Expect = 2e-11 Identities = 87/507 (17%), Positives = 149/507 (29%), Gaps = 202/507 (39%) Query: 1 MLPISCLPFMLQSH--VSPVLL-PIKGVRLSAAALGIKYVGRDDVFLMVF---------- 47 M S P L SH + VLL P A ++ + F + Sbjct: 1 MDAYSTRPLTL-SHGSLEHVLLVPT---ASFFIASQLQ-----EQFNKILPEPTEGFAAD 51 Query: 48 DNPASVAGVFTR-------SSCPSAPV---------------DFCKGNLSHGIARALI-- 83 D P + A + + PS + +GN H +A L+ Sbjct: 52 DEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQE 111 Query: 84 -------VNSGIANAFTGKR--GRDTVRFIAKAVSELIP--------------------- 113 I N T + R F K+ S L Sbjct: 112 NDTTLVKTKELIKNYITARIMAKR---PFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDD 168 Query: 114 CKEE--EVYVASTGIIGEFLDVALFDGVLSKMLCDATDDA------------WLDSAKAM 159 EE ++Y ++G+ + + LS+ L T DA WL++ Sbjct: 169 YFEELRDLYQTYHVLVGDLIKFS--AETLSE-LIRTTLDAEKVFTQGLNILEWLENPSNT 225 Query: 160 MTTDRYAKVAVRTVDIDGIRVTINGLAKGAGMIAPDMATTLA-FVVT--DINISPAVLQN 216 D + + + G+ LA +VVT + +P L++ Sbjct: 226 PDKDYLLSIPIS--------CPLIGV------------IQLAHYVVTAKLLGFTPGELRS 265 Query: 217 ILSEGAEYSFNS--ITVDGDTSTSDTL------------LLFATGTVLGNFAPITDVSDK 262 L GA + +S + + +D+ +LF G P Sbjct: 266 YLK-GA--TGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYP------- 315 Query: 263 RLSLFRPALFDLLKDLALQVVCDGEGA-SKLLEVTVKGAADCA-------------SAKK 308 SL P++ L+D + + EG S +L ++ + K+ Sbjct: 316 NTSL-PPSI---LED----SLENNEGVPSPML--SISNLTQEQVQDYVNKTNSHLPAGKQ 365 Query: 309 VALSIANSPLVKTAFASESFGWWGRIVMAVG--KSGVLVDRDRLSVWFGDVRIANNG--E 364 V +S+ N V++ G +S L L++ + A +G + Sbjct: 366 VEISLVNGA---KNL-----------VVS-GPPQS--LY---GLNLTLRKAK-APSGLDQ 404 Query: 365 PEINFSQESVRSIVKKKCV----PITV 387 I FS+ R K K P+ Sbjct: 405 SRIPFSE---R---KLKFSNRFLPVAS 425 Score = 44.5 bits (105), Expect = 4e-05 Identities = 29/139 (20%), Positives = 42/139 (30%), Gaps = 67/139 (48%) Query: 2 LPISCLPFMLQSHVSPVL----------LPIKGVRLSAAALGIKYVGRDDVFLMVFDNPA 51 LP++ PF H S +L L V +A + I V+D Sbjct: 421 LPVA-SPF----H-SHLLVPASDLINKDLVKNNVSFNAKDIQIP----------VYDT-- 462 Query: 52 SVAGVFT----RSSCPS-----------APVDF---CKGNLSHGIARALIVN------SG 87 F R S PV + + +H I++ SG Sbjct: 463 -----FDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATH------ILDFGPGGASG 511 Query: 88 IANAFTGKRGRD-T-VRFI 104 + T R +D T VR I Sbjct: 512 LGV-LT-HRNKDGTGVRVI 528 Score = 41.1 bits (96), Expect = 5e-04 Identities = 67/249 (26%), Positives = 94/249 (37%), Gaps = 84/249 (33%) Query: 199 TLAFVVTDINISPAVLQNI-LSEGAE--------YS---FNSITVDG------------D 234 T F + DI I+ V N+ + G E YS F +I VDG + Sbjct: 1656 TYGFSILDIVINNPV--NLTIHFGGEKGKRIRENYSAMIFETI-VDGKLKTEKIFKEINE 1712 Query: 235 TSTSDTL-----LLFATGTVLGNFAPITDVSDKRLSLFRPALFDLLKDLALQVVCDGEGA 289 STS T LL AT + L+L A F+ LK L + D A Sbjct: 1713 HSTSYTFRSEKGLLSAT-----------QFTQPALTLMEKAAFEDLKSKGL-IPADATFA 1760 Query: 290 SKLLEVTVKGA-ADCASAKKVALSIANSPLVKTAFASESFGWWGRIVMAVGKSGVLVDRD 348 L G A AS V +SI + LV+ F + G + M V V RD Sbjct: 1761 GHSL-----GEYAALASLADV-MSIES--LVEVVF------YRG-MTMQVA-----VPRD 1800 Query: 349 RLSVW-FGDVRIANNGEPEINFSQESVRSIVKKKCVPITVDLQIGNGIHTVWTCDFSKEY 407 L +G + I N G +FSQE+++ +V++ G T W E Sbjct: 1801 ELGRSNYGMIAI-NPGRVAASFSQEALQYVVERV------------GKRTGWLV----EI 1843 Query: 408 IHFN-SNVQ 415 +++N N Q Sbjct: 1844 VNYNVENQQ 1852 Score = 38.8 bits (90), Expect = 0.002 Identities = 75/420 (17%), Positives = 128/420 (30%), Gaps = 173/420 (41%) Query: 15 VS-PVLLPIKGV------RLSAAALGIKYVGRDDVFLMVFDNPASVAGVFTRSSCPSAPV 67 +S P+ P+ GV ++A LG P + ++ Sbjct: 232 LSIPISCPLIGVIQLAHYVVTAKLLGF--------------TPGELRSYLKGAT------ 271 Query: 68 DFCKGNLSHGIARALIVNSGIANAFTGKRGRDT-VRFIA---KAVSEL--IPCKEEEVYV 121 G+ S G+ + IA D+ F KA++ L I + E Y Sbjct: 272 ----GH-SQGL----VTAVAIAET-------DSWESFFVSVRKAITVLFFIGVRCYEAYP 315 Query: 122 AST---GII------GEFLDVALFDGVLSKMLC--DATDDA---WLDSAKAMMTTDRYAK 167 ++ I+ E GV S ML + T + +++ + + + + Sbjct: 316 NTSLPPSILEDSLENNE--------GVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVE 367 Query: 168 VAVRTVDIDGIRVTINGLAKGAGMIAPDMATTLAFVVTDINISPAVLQNILSEGAEYSFN 227 +++ +NG VV+ P L Y N Sbjct: 368 ISL-----------VNG---------AK-----NLVVSG---PPQSL---------YGLN 390 Query: 228 S----ITVDG--DTST---SDTLLLFATGTVLGNFAPITDV---SDKRLSLFRPALFDLL 275 D S S+ L F+ F P+ S L PA + Sbjct: 391 LTLRKAKAPSGLDQSRIPFSERKLKFSN-----RFLPVA-SPFHS----HLLVPASDLIN 440 Query: 276 KDLALQVVCDGEGASKLLEVTVKGAADCASAKKVALSIANSPLVK------------TAF 323 KDL + +K +++ V D + + ++ SI+ +V T F Sbjct: 441 KDLVKN---NVSFNAKDIQIPVYDTFDGSDLRVLSGSISER-IVDCIIRLPVKWETTTQF 496 Query: 324 -ASE--SFGWWGRIVMAVGKSG--VLVDRDRLSVWFGD---VRI------ANNGEPEINF 369 A+ FG G G SG VL R++ D VR+ N + + F Sbjct: 497 KATHILDFG-PG------GASGLGVLTHRNK------DGTGVRVIVAGTLDINPDDDYGF 543 >1b65_A DMPA, protein (aminopeptidase); hydrolase, peptide degradation, NTN hydrolase; 1.82A {Ochrobactrum anthropi} SCOP: d.154.1.1 Length = 375 Score = 30.7 bits (69), Expect = 0.69 Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 8/103 (7%) Query: 175 IDGIRVTINGLAKGAGMIAPDMATTLAFVVTDINISPAVLQNILSEGAEYSFNSITVDGD 234 I G+ V + + + + + TD+ + P L+ L+ A G Sbjct: 227 IAGVPVGQHMRDGTPQSQLQERGSIIVVLATDLPLMPHQLKR-LARRASIGIGRNGTPGG 285 Query: 235 TSTSDTLLLFATGTVLG------NFAPITDVSDKRLS-LFRPA 270 ++ D + F+T F + V+D+ L ++ A Sbjct: 286 NNSGDIFIAFSTANQRPMQHRSAPFLDVEMVNDEPLDTVYLAA 328 >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Score = 30.0 bits (66), Expect = 0.94 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%) Query: 289 ASKLLEVTVKGAADCASAKKVALSI 313 A K L+ ++K AD SA AL+I Sbjct: 21 ALKKLQASLKLYAD-DSAP--ALAI 42 >2drh_A PH0078 protein, 361AA long hypothetical D-aminopeptidase; structural genomics, NPPSFA; 2.10A {Pyrococcus horikoshii OT3} Length = 361 Score = 28.8 bits (64), Expect = 2.2 Identities = 14/93 (15%), Positives = 29/93 (31%), Gaps = 6/93 (6%) Query: 183 NGLAKGAGMIAPDMATTLAFVVTDINISPAVLQNILSEGAEYSFNSITVDGDTSTSDTLL 242 L G + + + TD ++ L +++ A + D + Sbjct: 224 LELKNWPGRGGEGKGSIIMIIATDAPLTGRQLNR-VAKRAIVGLARTGGYAYNGSGDIAV 282 Query: 243 LFATGTVLG----NFAPITDVSDKRLS-LFRPA 270 F+T + I + D +S LF+ Sbjct: 283 AFSTANRIKHYEKEVIEIKALPDSVISPLFKAT 315 >3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A Length = 94 Score = 28.6 bits (64), Expect = 2.4 Identities = 10/77 (12%), Positives = 29/77 (37%), Gaps = 7/77 (9%) Query: 318 LVKTAFASESFGWWGRIVMAVGKSGVLVDR-------DRLSVWFGDVRIANNGEPEINFS 370 + K+ A++++G+ V G + V+ + + GD + N + Sbjct: 12 IEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALN 71 Query: 371 QESVRSIVKKKCVPITV 387 ++ + + + + V Sbjct: 72 SSMLKDFLSQPSLGLLV 88 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.321 0.136 0.398 Gapped Lambda K H 0.267 0.0657 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 3,450,804 Number of extensions: 155656 Number of successful extensions: 410 Number of sequences better than 10.0: 1 Number of HSP's gapped: 392 Number of HSP's successfully gapped: 16 Length of query: 416 Length of database: 5,693,230 Length adjustment: 95 Effective length of query: 321 Effective length of database: 3,390,050 Effective search space: 1088206050 Effective search space used: 1088206050 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 58 (26.3 bits)