HHsearch alignment for GI: 254780327 and conserved domain: COG1200

Probab=97.80  E-value=0.00013  Score=56.93  Aligned_cols=81  Identities=20%  Similarity=0.296  Sum_probs=70.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHC------CCCCCC
Q ss_conf             33680689999999998607999569746927738759999999988294367635987988997402------563533
Q gi|254780327|r  106 KTGEGKTLAAVLPVYLNALSGKGVHVVTVNDYLARRDSNTMSAIYKFLGLSTGVVFHDLSDDKRRAAY------ACDITY  179 (890)
Q Consensus       106 ~TGEGKTL~a~l~~~lnal~g~~vhvvTvNdyLA~RDa~~m~~~y~~lglsvg~~~~~~~~~~r~~~Y------~~di~Y  179 (890)
T Consensus       291 DVGSGKTvVA~laml~ai~~G~Q~ALMAPTEILA~QH~~~~~~~l~~~~i~V~lLtG~~kgk~r~~~l~~l~~G~~~ivV  370 (677)
T COG1200         291 DVGSGKTVVALLAMLAAIEAGYQAALMAPTEILAEQHYESLRKWLEPLGIRVALLTGSLKGKARKEILEQLASGEIDIVV  370 (677)
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEE
T ss_conf             76777899999999999872881688663799999999999987665197489864466506799999987479989799


Q ss_pred             CCCCCCC
Q ss_conf             4434321
Q gi|254780327|r  180 ITNNELG  186 (890)
Q Consensus       180 ~t~~e~g  186 (890)
T Consensus       371 GTHALiQ  377 (677)
T COG1200         371 GTHALIQ  377 (677)
T ss_pred             ECCHHHH
T ss_conf             7221220