HHsearch alignment for GI: 254780327 and conserved domain: COG1205
>COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only].
Probab=98.16 E-value=0.0017 Score=47.91 Aligned_cols=321 Identities=23% Similarity=0.211 Sum_probs=176.2
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHCCCC--EEEECCCCCHHHHHHHHHHHHHHCCCCC--EEECCCCHHHHHHHHHHHHHH
Q ss_conf 999576608768447999999970794--5067336806899999999986079995--697469277387599999999
Q gi|254780327|r 75 REVARRTLGMRPFDVQLLGGMILHKGC--VAEMKTGEGKTLAAVLPVYLNALSGKGV--HVVTVNDYLARRDSNTMSAIY 150 (890)
Q Consensus 75 rea~~R~lg~~~~dvQl~g~~~l~~g~--iaem~TGEGKTL~a~l~~~lnal~g~~v--hvvTvNdyLA~RDa~~m~~~y 150 (890)
T Consensus 60 ~~~l~~~g~~~lY~HQ~~A~~~~~~G~~vvVtTgTgSGKTe~FllPIld~~l~~~~a~AL~lYPtnALa~DQ~~rl~~~~ 139 (851)
T COG1205 60 KSALVKAGIERLYSHQVDALRLIREGRNVVVTTGTGSGKTESFLLPILDHLLRDPSARALLLYPTNALANDQAERLRELI 139 (851)
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHH
T ss_conf 89999743442007799999999779988997899885458989999999830866508998043776766999999999
Q ss_pred HHHC--CCEEEECCCCCHHHHHHHCC--CCCCCCCCCCCCCCCCHHHHHHCHHHHCCCCCCEEEEECCHHHHHHHHCCCE
Q ss_conf 8829--43676359879889974025--6353344343211122143200002210266743886120354564302421
Q gi|254780327|r 151 KFLG--LSTGVVFHDLSDDKRRAAYA--CDITYITNNELGFDYLRDNMQYRRVDMVQRGHNFAIVDEVDSIFIDEARTPL 226 (890)
Q Consensus 151 ~~lg--lsvg~~~~~~~~~~r~~~Y~--~di~Y~t~~e~gfDyLrDnm~~~~~~~v~r~~~~aivDEvDSiLiDeartPL 226 (890)
T Consensus 140 ~~~~~~v~~~~y~Gdt~~~~r~~~~~~pp~IllTNpdMLh~~llr~---------------------------------- 185 (851)
T COG1205 140 SDLPGKVTFGRYTGDTPPEERRAIIRNPPDILLTNPDMLHYLLLRN---------------------------------- 185 (851)
T ss_pred HHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCC----------------------------------
T ss_conf 8478751354434889678889987389978983889998986368----------------------------------
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 52388765247878743454430135514414444322014679999863101688452475760013389999999999
Q gi|254780327|r 227 IISGPVEDHSDLYRTIDSIIIQLHPSDYEIDEKQRTVHFSEKGTERIEELLHGENLLKSGGLYSFENVAIVHLINNALKS 306 (890)
Q Consensus 227 iIsg~~~~~~~~~~~~~~~~~~l~~~dy~id~~~~~v~lt~~G~~~~e~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~A 306 (890)
T Consensus 186 ----------------------------------------------------------------------------~~~~ 189 (851)
T COG1205 186 ----------------------------------------------------------------------------HDAW 189 (851)
T ss_pred ----------------------------------------------------------------------------CCCH
T ss_conf ----------------------------------------------------------------------------8227
Q ss_pred HHHHHCCCCEEEECCCEEEEEC-CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC---CHHCCCC
Q ss_conf 9985269731610893789755-45851568621123489999997302484312566434889983032---0000134
Q gi|254780327|r 307 HTLFLRNRDYIVNRDEVVIIDE-FTGRMMPGRRYSDGQHQALEAKERVKIQPENQTLSSITFQNYFLKYR---KLSGMTG 382 (890)
Q Consensus 307 ~~~~~~d~~Yiv~~~~v~ivDe-~TGr~~~gr~~~~GlhQaieaKe~v~i~~e~~t~a~it~qn~Fr~y~---kl~GmTG 382 (890)
T Consensus 190 ~~~-~~~Lk~lV-------vDElHtYrGv~------GS~vA~llR---------------RL~~~~~~~~~~~q~i~~SA 240 (851)
T COG1205 190 LWL-LRNLKYLV-------VDELHTYRGVQ------GSEVALLLR---------------RLLRRLRRYGSPLQIICTSA 240 (851)
T ss_pred HHH-HHCCCEEE-------EECCEECCCCH------HHHHHHHHH---------------HHHHHHHCCCCCCEEEEEEC
T ss_conf 888-73275899-------84441215603------788999999---------------99999724589962899831
Q ss_pred CCHHHHHHHHHHHCCCEEE-E-----CCCCCEEEEECHHHHCCCH---HHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHH
Q ss_conf 3054899999871996798-0-----7899622430203422377---88999999999999740990798611167899
Q gi|254780327|r 383 TASTEAEELANIYNLDVIE-V-----PTNVPVIRIDEHDEIYRTS---EEKYAAIIAEIIDSHKKGQPVLVGTPSIEKSE 453 (890)
Q Consensus 383 Ta~te~~Ef~~iY~l~v~~-i-----Ptnkp~~r~d~~d~v~~t~---~~k~~ai~~~i~~~~~~grpvLvgt~sve~Se 453 (890)
T Consensus 241 T~~np~e~~~~l~~~~f~~~v~~~g~~~~~~~~~~~~p~~~~~~~~~r~s~~~~~~~~~~~~~~~~~~tL~F~~sr~~~e 320 (851)
T COG1205 241 TLANPGEFAEELFGRDFEVPVDEDGSPRGLRYFVRREPPIRELAESIRRSALAELATLAALLVRNGIQTLVFFRSRKQVE 320 (851)
T ss_pred CCCCHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEHHHHHH
T ss_conf 24682889998628721463147888878748998568511332211234577999999999876965999983575678
Q ss_pred HHH----HHHHHCC--C-CHHHHHHHHHHHHHHHHHH---HCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 999----9998607--7-1022310224778888875---3055870488750244665540276755788865113575
Q gi|254780327|r 454 YLA----SQLRKHK--F-TKFQILNALYHEKEAYIIS---QAGIPGAVTIATNMAGRGTDIQLGGNVAMRIEHELANISD 523 (890)
Q Consensus 454 ~ls----~~L~~~~--~-~~h~vLNAk~~~~Ea~Iia---~AG~~g~vTiATNMAGRGTDI~Lgg~~~~~~~~~~~~~~~ 523 (890)
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~v~~~~~~~~~~er~~ie~~~~~g-~~~~~~st~AlelgidiG------------------ 381 (851)
T COG1205 321 LLYLSPRRRLVREGGKLLDAVSTYRAGLHREERRRIEAEFKEG-ELLGVIATNALELGIDIG------------------ 381 (851)
T ss_pred HHHHHHHHHHHHCCCCHHHHEEECCCCCCHHHHHHHHHHHHCC-CCCEEEECHHHCCCEEEC------------------
T ss_conf 8754157887540601033134233669999999999997468-841786121012265670------------------
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC-CHHHHHHHCCCCCCCCCC
Q ss_conf 5300899999999877643334540762799826775-323355420543456686
Q gi|254780327|r 524 EEIRNKRIKMIQEEVQSLKEKAIVAGGLYVISTERHE-SRRIDNQLRGRSGRQGDP 578 (890)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~v~~~GGL~Vigterhe-srRid~QlrGRagRQGdp 578 (890)
T Consensus 382 -------------------------~ldavi~~g~P~~s~~~~~Q~~GRaGR~~~~ 412 (851)
T COG1205 382 -------------------------SLDAVIAYGYPGVSVLSFRQRAGRAGRRGQE 412 (851)
T ss_pred -------------------------CEEEEEECCCCCCHHHHHHHHHCCCCCCCCC
T ss_conf -------------------------2114530488970288898861103588787