HHsearch alignment for GI: 254780327 and conserved domain: KOG0338

Probab=97.13  E-value=0.039  Score=36.86  Aligned_cols=118  Identities=25%  Similarity=0.305  Sum_probs=86.0

Q ss_pred             HCCCCEEEECCCCCHHHHHHHHHHHHHHC------CCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHH
Q ss_conf             70794506733680689999999998607------999569746927738759999999988294367635987988997
Q gi|254780327|r   97 LHKGCVAEMKTGEGKTLAAVLPVYLNALS------GKGVHVVTVNDYLARRDSNTMSAIYKFLGLSTGVVFHDLSDDKRR  170 (890)
Q Consensus        97 l~~g~iaem~TGEGKTL~a~l~~~lnal~------g~~vhvvTvNdyLA~RDa~~m~~~y~~lglsvg~~~~~~~~~~r~  170 (890)
T Consensus       217 lgkDIca~A~TGsGKTAAF~lPiLERLlYrPk~~~~TRVLVL~PTRELaiQv~sV~~qlaqFt~I~~~L~vGGL~lk~QE  296 (691)
T KOG0338         217 LGKDICACAATGSGKTAAFALPILERLLYRPKKVAATRVLVLVPTRELAIQVHSVTKQLAQFTDITVGLAVGGLDLKAQE  296 (691)
T ss_pred             HCCHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHH
T ss_conf             22225640114687114567889999852735676126999835089999999999998766040244452474578899


Q ss_pred             HH--CCCCCCCCCCCCCCCCCCHHHHHHCHHHHCCCCCCEEEEECCHHHHHH
Q ss_conf             40--256353344343211122143200002210266743886120354564
Q gi|254780327|r  171 AA--YACDITYITNNELGFDYLRDNMQYRRVDMVQRGHNFAIVDEVDSIFID  220 (890)
Q Consensus       171 ~~--Y~~di~Y~t~~e~gfDyLrDnm~~~~~~~v~r~~~~aivDEvDSiLiD  220 (890)
T Consensus       297 ~~LRs~PDIVIATPGRl-IDHlrNs~sf~ld-----siEVLvlDEADRMLee  342 (691)
T KOG0338         297 AVLRSRPDIVIATPGRL-IDHLRNSPSFNLD-----SIEVLVLDEADRMLEE  342 (691)
T ss_pred             HHHHHCCCEEEECCHHH-HHHHCCCCCCCCC-----CEEEEEECHHHHHHHH
T ss_conf             99830898799465058-8875158876534-----3257773338889999