HHsearch alignment for GI: 254780327 and conserved domain: KOG0340
>KOG0340 consensus.
Probab=97.94 E-value=0.0041 Score=44.83 Aligned_cols=135 Identities=27% Similarity=0.310 Sum_probs=90.0
Q ss_pred HHCCCC-CCHHHHHHHHHHCCCC--EEEECCCCCHHHHHHHHHHHHHHCCC----CCEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 660876-8447999999970794--50673368068999999999860799----9569746927738759999999988
Q gi|254780327|r 80 RTLGMR-PFDVQLLGGMILHKGC--VAEMKTGEGKTLAAVLPVYLNALSGK----GVHVVTVNDYLARRDSNTMSAIYKF 152 (890)
Q Consensus 80 R~lg~~-~~dvQl~g~~~l~~g~--iaem~TGEGKTL~a~l~~~lnal~g~----~vhvvTvNdyLA~RDa~~m~~~y~~ 152 (890)
T Consensus 23 ~~l~i~~pTpiQ~~cIpkILeGrdcig~AkTGsGKT~AFaLPi-l~rLsedP~giFalvlTPTrELA~QiaEQF~alGk~ 101 (442)
T KOG0340 23 KALGIKKPTPIQQACIPKILEGRDCIGCAKTGSGKTAAFALPI-LNRLSEDPYGIFALVLTPTRELALQIAEQFIALGKL 101 (442)
T ss_pred HHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH-HHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCC
T ss_conf 9835889982676524878546631031346887411222787-776133887606999545288888888999984564
Q ss_pred HCCCEEEECCCCCHH--HHHHHCCCCCCCCCCCCCCCCCCHHHHHHCHHHHCCCCCCEEEEECCHHHH
Q ss_conf 294367635987988--997402563533443432111221432000022102667438861203545
Q gi|254780327|r 153 LGLSTGVVFHDLSDD--KRRAAYACDITYITNNELGFDYLRDNMQYRRVDMVQRGHNFAIVDEVDSIF 218 (890)
Q Consensus 153 lglsvg~~~~~~~~~--~r~~~Y~~di~Y~t~~e~gfDyLrDnm~~~~~~~v~r~~~~aivDEvDSiL 218 (890)
T Consensus 102 l~lK~~vivGG~d~i~qa~~L~~rPHvVvatPGRla-d~l~sn~~~--~~~~~~rlkflVlDEADrvL 166 (442)
T KOG0340 102 LNLKVSVIVGGTDMIMQAAILSDRPHVVVATPGRLA-DHLSSNLGV--CSWIFQRLKFLVLDEADRVL 166 (442)
T ss_pred CCCEEEEEECCHHHHHHHHHCCCCCCEEECCCCCCC-CCCCCCCCC--CHHHHHCEEEEEECCHHHHH
T ss_conf 563279997568876454442669875751763335-411268765--52555300467741302654