HHsearch alignment for GI: 254780327 and conserved domain: KOG0344
>KOG0344 consensus.
Probab=97.90 E-value=0.00085 Score=50.35 Aligned_cols=134 Identities=23% Similarity=0.299 Sum_probs=95.7
Q ss_pred EEEEECHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 2243020342237788999999999999740990798611167899999999-860771022310224778888875305
Q gi|254780327|r 408 VIRIDEHDEIYRTSEEKYAAIIAEIIDSHKKGQPVLVGTPSIEKSEYLASQL-RKHKFTKFQILNALYHEKEAYIISQAG 486 (890)
Q Consensus 408 ~~r~d~~d~v~~t~~~k~~ai~~~i~~~~~~grpvLvgt~sve~Se~ls~~L-~~~~~~~h~vLNAk~~~~Ea~Iia~AG 486 (890)
T Consensus 358 ~~~V~QelvF~gse~~K~lA~rq~v~~g--~~PP~lIfVQs~eRak~L~~~L~~~~~i-~v~vIh~e~~~~qrde~~~~F 434 (593)
T KOG0344 358 NETVDQELVFCGSEKGKLLALRQLVASG--FKPPVLIFVQSKERAKQLFEELEIYDNI-NVDVIHGERSQKQRDETMERF 434 (593)
T ss_pred HHHHHHHHEEEECCHHHHHHHHHHHHCC--CCCCEEEEEECHHHHHHHHHHHHHCCCC-CEEEEECCCCHHHHHHHHHHH
T ss_conf 6554555121104345778899998615--8997489885388899999986423576-634676366666778999998
Q ss_pred CCCC--EEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH--
Q ss_conf 5870--488750244665540276755788865113575530089999999987764333454076279982677532--
Q gi|254780327|r 487 IPGA--VTIATNMAGRGTDIQLGGNVAMRIEHELANISDEEIRNKRIKMIQEEVQSLKEKAIVAGGLYVISTERHESR-- 562 (890)
Q Consensus 487 ~~g~--vTiATNMAGRGTDI~Lgg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~GGL~Vigterhesr-- 562 (890)
T Consensus 435 R~g~IwvLicTdll~RGiDf~-------------------------------------------gvn~VInyD~p~s~~s 471 (593)
T KOG0344 435 RIGKIWVLICTDLLARGIDFK-------------------------------------------GVNLVINYDFPQSDLS 471 (593)
T ss_pred HCCCEEEEEEHHHHHCCCCCC-------------------------------------------CCCEEEECCCCCHHHH
T ss_conf 506706888504665455645-------------------------------------------7636895378722478
Q ss_pred HHHHHHCCCCCCCCCCCCEEEEEECCC
Q ss_conf 335542054345668672389984230
Q gi|254780327|r 563 RIDNQLRGRSGRQGDPGRSKFYLSLQD 589 (890)
Q Consensus 563 Rid~QlrGRagRQGdpG~s~f~~SleD 589 (890)
T Consensus 472 yih-rI-GRtgRag~~g~Aitfytd~d 496 (593)
T KOG0344 472 YIH-RI-GRTGRAGRSGKAITFYTDQD 496 (593)
T ss_pred HHH-HH-HCCCCCCCCCCEEEEECCCC
T ss_conf 888-73-02578898861699863255