HHsearch alignment for GI: 254780327 and conserved domain: KOG0348
>KOG0348 consensus.
Probab=95.26 E-value=0.12 Score=32.77 Aligned_cols=126 Identities=25% Similarity=0.289 Sum_probs=76.1
Q ss_pred CCHHHHHHHHHHCCCC--EEEECCCCCHHHHHHHHHHHHHHCCCC----------CEEECCCCHHHHHHHHHHHHHHHHH
Q ss_conf 8447999999970794--506733680689999999998607999----------5697469277387599999999882
Q gi|254780327|r 86 PFDVQLLGGMILHKGC--VAEMKTGEGKTLAAVLPVYLNALSGKG----------VHVVTVNDYLARRDSNTMSAIYKFL 153 (890)
Q Consensus 86 ~~dvQl~g~~~l~~g~--iaem~TGEGKTL~a~l~~~lnal~g~~----------vhvvTvNdyLA~RDa~~m~~~y~~l 153 (890)
T Consensus 160 pTsVQkq~IP~lL~grD~lV~aQTGSGKTLAYllPiV-q~Lq~m~~ki~Rs~G~~ALVivPTREL~~Q~y~~~qKLl~~~ 238 (708)
T KOG0348 160 PTSVQKQAIPVLLEGRDALVRAQTGSGKTLAYLLPIV-QSLQAMEPKIQRSDGPYALVIVPTRELALQIYETVQKLLKPF 238 (708)
T ss_pred CCHHHHCCHHHHHCCCCEEEECCCCCCCCHHHHHHHH-HHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCC
T ss_conf 4067650203552586347885778862179999999-999726865555688348998041999999999999872574
Q ss_pred CCCEEEE-C-CC-CCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCHHHHCCCCCCEEEEECCHHHH
Q ss_conf 9436763-5-98-7988997402563533443432111221432000022102667438861203545
Q gi|254780327|r 154 GLSTGVV-F-HD-LSDDKRRAAYACDITYITNNELGFDYLRDNMQYRRVDMVQRGHNFAIVDEVDSIF 218 (890)
Q Consensus 154 glsvg~~-~-~~-~~~~~r~~~Y~~di~Y~t~~e~gfDyLrDnm~~~~~~~v~r~~~~aivDEvDSiL 218 (890)
T Consensus 239 hWIVPg~lmGGEkkKSEKARLRKGiNILIgTPGRLv-----DHLknT~~i~~s~-LRwlVlDEaDrll 300 (708)
T KOG0348 239 HWIVPGVLMGGEKKKSEKARLRKGINILIGTPGRLV-----DHLKNTKSIKFSR-LRWLVLDEADRLL 300 (708)
T ss_pred EEEEECEEECCCCCCCHHHHHHCCCEEEECCCHHHH-----HHHHCCCHHEEEE-EEEEEECCHHHHH
T ss_conf 377302122363310178887548548975842788-----9874300221003-5689853436787