HHsearch alignment for GI: 254780327 and conserved domain: PRK09694

Probab=95.54  E-value=0.094  Score=33.70  Aligned_cols=196  Identities=18%  Similarity=0.187  Sum_probs=106.6

Q ss_pred             HHHHHHHHHHHHHCCCCEEE----ECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             99999999998526973161----08937897554585156862112348999999730248431256643488998303
Q gi|254780327|r  299 LINNALKSHTLFLRNRDYIV----NRDEVVIIDEFTGRMMPGRRYSDGQHQALEAKERVKIQPENQTLSSITFQNYFLKY  374 (890)
Q Consensus       299 ~i~~al~A~~~~~~d~~Yiv----~~~~v~ivDe~TGr~~~gr~~~~GlhQaieaKe~v~i~~e~~t~a~it~qn~Fr~y  374 (890)
T Consensus       419 TiDQaLla~L~---~kH~~LR~~gLa~kvvIiDEVHAYD~Ym~~lL~~lL~w-l~~~g~~viLLSATLP~~~R~~L~~ay  494 (878)
T PRK09694        419 TIDQVLISVLP---VKHRFIRGLGIGRSVLIVDEVHAYDAYMNGLLEAVLKA-QAQVGGSVILLSATLPMTQKQKLLDTY  494 (878)
T ss_pred             CHHHHHHHHHC---CCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHH-HHHCCCCEEEEECCCCHHHHHHHHHHH
T ss_conf             79999998746---14899999986287489725333458899999999999-998399889992789899999999975


Q ss_pred             CCHHCCCCCCHHHHHHHHHHHCC---------CEEEECCCCCEEEEECHHHHC-CCHHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             20000134305489999987199---------679807899622430203422-37788999999999999740990798
Q gi|254780327|r  375 RKLSGMTGTASTEAEELANIYNL---------DVIEVPTNVPVIRIDEHDEIY-RTSEEKYAAIIAEIIDSHKKGQPVLV  444 (890)
Q Consensus       375 ~kl~GmTGTa~te~~Ef~~iY~l---------~v~~iPtnkp~~r~d~~d~v~-~t~~~k~~ai~~~i~~~~~~grpvLv  444 (890)
T Consensus       495 ~---~~~~~~~~-----~~~YP~it~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~~~~~G~~v~v  566 (878)
T PRK09694        495 G---LHTDPVEN-----NSAYPLINWRGVNGAQRFDLLAHQLPPRFSIQPEPICLADMLPDLTMLERMIAAANAGAQVCV  566 (878)
T ss_pred             C---CCCCCCCC-----CCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEE
T ss_conf             5---68876666-----778861363155666753446555677723788876314447648999999999978995999


Q ss_pred             EEHHHHHHHHHHHHHHHCCCCH--HHHHHHHH-----HHHHHHHHHHCCC-----CCCEEEEEECCCCCCCCCC
Q ss_conf             6111678999999998607710--22310224-----7788888753055-----8704887502446655402
Q gi|254780327|r  445 GTPSIEKSEYLASQLRKHKFTK--FQILNALY-----HEKEAYIISQAGI-----PGAVTIATNMAGRGTDIQL  506 (890)
Q Consensus       445 gt~sve~Se~ls~~L~~~~~~~--h~vLNAk~-----~~~Ea~Iia~AG~-----~g~vTiATNMAGRGTDI~L  506 (890)
T Consensus       567 I~NTV~rAq~~y~~L~~~~~~~~~v~L~HsRF~~~DR~~~E~~vl~~~Gk~~~r~~g~IlVaTQVvEQSLDiDf  640 (878)
T PRK09694        567 ICNLVDDAQVCYQRLKELNNTQVDIDLFHARFTFNDRREKENRVISNFGKNGKRNVGRILVATQVVEQSLDLDF  640 (878)
T ss_pred             EECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCC
T ss_conf             93889999999999998528998779986888776699999999998688988999869997733324303353