HHsearch alignment for GI: 254780327 and conserved domain: PRK09751

>PRK09751 putative ATP-dependent helicase Lhr; Provisional.
Probab=97.45  E-value=0.0013  Score=48.83  Aligned_cols=108  Identities=29%  Similarity=0.331  Sum_probs=74.1

Q ss_pred             CCCCCHHHHHHHHHHHHHH------------CCCCCEEECCCCHHHH-HHHH--HHHHH------HH-----HHCCCEEE
Q ss_conf             3368068999999999860------------7999569746927738-7599--99999------98-----82943676
Q gi|254780327|r  106 KTGEGKTLAAVLPVYLNAL------------SGKGVHVVTVNDYLAR-RDSN--TMSAI------YK-----FLGLSTGV  159 (890)
Q Consensus       106 ~TGEGKTL~a~l~~~lnal------------~g~~vhvvTvNdyLA~-RDa~--~m~~~------y~-----~lglsvg~  159 (890)
T Consensus         4 PTGSGKTLAAFL~a-Ld~L~~~~~~~~~~~~~~~~~~VLYISPLKALa~Dv~rNL~~PL~gI~~~~~~~g~~~~~i~V~v   82 (1490)
T PRK09751          4 PTGSGKTLAAFLYA-LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI   82 (1490)
T ss_pred             CCCCCHHHHHHHHH-HHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf             88743989999999-99999614555555678897389995927888999999998799888999986256789975863


Q ss_pred             ECCCCCHHHHHHHCC--CCCCCCCCCCCCCCCCHHHHHHCHHHHCCCCCCEEEEECCHHHHHH
Q ss_conf             359879889974025--6353344343211122143200002210266743886120354564
Q gi|254780327|r  160 VFHDLSDDKRRAAYA--CDITYITNNELGFDYLRDNMQYRRVDMVQRGHNFAIVDEVDSIFID  220 (890)
Q Consensus       160 ~~~~~~~~~r~~~Y~--~di~Y~t~~e~gfDyLrDnm~~~~~~~v~r~~~~aivDEvDSiLiD  220 (890)
T Consensus        83 RtGDT~~~eR~r~~r~PPdILITTPESL-~--L---lLtsk~r~~L~~v~~VIVDEiHalags  139 (1490)
T PRK09751         83 RTGDTPAQERSKLTRNPPDILITTPESL-Y--L---MLTSRARETLRGVETVIIDEVHAVAGS  139 (1490)
T ss_pred             ECCCCCHHHHHHHHHCCCCEEEECHHHH-H--H---HHHHHHHHHHCCCCEEEECCCHHHHCC
T ss_conf             7999999999998508998398488999-9--9---873569999779989996286442058