HHsearch alignment for GI: 254780327 and conserved domain: PRK12900
>PRK12900 secA preprotein translocase subunit SecA; Reviewed.
Probab=100.00 E-value=0 Score=2667.71 Aligned_cols=842 Identities=45% Similarity=0.739 Sum_probs=775.5
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC-
Q ss_conf 9999998718855735899999999998422888838989999999999999973998889669999999999576608-
Q gi|254780327|r 5 LAKLASKLLIPSNERRLRPYYAKVIAINELEKEISHLSDDSLANKTSEFKERINNGETLDDLLVPAFAVVREVARRTLG- 83 (890)
Q Consensus 5 ~~~~~~k~~~~~~~~~l~~~~~~~~~in~~e~~~~~lsd~~l~~~t~~~~~~~~~g~~l~~~l~eafa~~rea~~R~lg- 83 (890)
T Consensus 1 m~~~~~kifg~~n~r~lk~~~~~v~~In~le~~~~~lsD~eL~~kt~efk~rl~~ge~ld~iL~EAFA~vREa~~R~lG~ 80 (983)
T PRK12900 1 MLKIFEKIFGSKHDKDIKKIQPIVDRINEIQASLQSLSDEQLRAKGAELKSRVRGAAALEEILPETFALVKETCRRLKGH 80 (983)
T ss_pred CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 93778987699307679999999999998689998479999999999999999779977888599999999999986166
Q ss_pred ------------CCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHH
Q ss_conf ------------76844799999997079450673368068999999999860799956974692773875999999998
Q gi|254780327|r 84 ------------MRPFDVQLLGGMILHKGCVAEMKTGEGKTLAAVLPVYLNALSGKGVHVVTVNDYLARRDSNTMSAIYK 151 (890)
Q Consensus 84 ------------~~~~dvQl~g~~~l~~g~iaem~TGEGKTL~a~l~~~lnal~g~~vhvvTvNdyLA~RDa~~m~~~y~ 151 (890)
T Consensus 81 rh~~~g~~~~~~m~~ydvQliGg~~Lh~G~IaEM~TGEGKTLvatlp~ylnaL~GkgvHvvTvNdYLA~RDae~m~~vy~ 160 (983)
T PRK12900 81 TYQVMGREMTWDMVPYDVQLIGGIVLHSGKISEMATGEGKTLVSTLPTFLNALTGRGVHVVTVNDYLAQRDKEWMNPVFE 160 (983)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHH
T ss_conf 43334433446677774699979998368314551788589999999999863699828981456767867999999999
Q ss_pred HHCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCHHHHCCCCCCEEEEECCHHHHHHHHCCCEEECCC
Q ss_conf 82943676359879889974025635334434321112214320000221026674388612035456430242152388
Q gi|254780327|r 152 FLGLSTGVVFHDLSDDKRRAAYACDITYITNNELGFDYLRDNMQYRRVDMVQRGHNFAIVDEVDSIFIDEARTPLIISGP 231 (890)
Q Consensus 152 ~lglsvg~~~~~~~~~~r~~~Y~~di~Y~t~~e~gfDyLrDnm~~~~~~~v~r~~~~aivDEvDSiLiDeartPLiIsg~ 231 (890)
T Consensus 161 fLGlsvg~i~~~~~~~err~aY~~DItYgTn~E~gFDYLRDnm~~~~~~~vqr~~~~aIVDEvDSiLIDEArTPLIISgp 240 (983)
T PRK12900 161 FHGLSVGVILNSMRPEERREQYLCDITYGTNNEFGFDYLRDNMAGSPEEMVQRDFYFAIVDEVDSVLIDEARTPLIISGP 240 (983)
T ss_pred HHCCEEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCCCHHCCCCCHHHHCCCCCCEEEEECHHHHHHHCCCCCEEEECC
T ss_conf 84977703089999899999875995787898542402100447786884278885589844156643035685155057
Q ss_pred CCC-CHHHHHHHHHHHHHH-------------------------------------------------C-----------
Q ss_conf 765-247878743454430-------------------------------------------------1-----------
Q gi|254780327|r 232 VED-HSDLYRTIDSIIIQL-------------------------------------------------H----------- 250 (890)
Q Consensus 232 ~~~-~~~~~~~~~~~~~~l-------------------------------------------------~----------- 250 (890)
T Consensus 241 ~~~~~~~~y~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~ 320 (983)
T PRK12900 241 VPNADNSKFQEIKPWIEQLVRAQQNLVASYLTEAEKVLKTKPNDFEAGLALLRVKRGQPKNKRFIKMLSQQGIAKLIQST 320 (983)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHH
T ss_conf 76652266777646788888888766555667776543014431123456665421564114566642002377765533
Q ss_pred -----------------CCCEEECCCCCCCCHHHHHHHHHHHHHHHC-CC-------------------------CCCCC
Q ss_conf -----------------355144144443220146799998631016-88-------------------------45247
Q gi|254780327|r 251 -----------------PSDYEIDEKQRTVHFSEKGTERIEELLHGE-NL-------------------------LKSGG 287 (890)
Q Consensus 251 -----------------~~dy~id~~~~~v~lt~~G~~~~e~~~~~~-~~-------------------------~~~~~ 287 (890)
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~y~idek~~~v~Lte~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 400 (983)
T PRK12900 321 ENEYLKDNSSRMHEVDDELYFAVDEKANTIDLTDKGREFLSKLSHQDSDLFLLPDVGTEIAAIDSDASLSAEDKIKRKDE 400 (983)
T ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 67776544543023441111576046674235667789998751024201113320234443012222224666542100
Q ss_pred CC--CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 57--6001338999999999999852697316108937897554585156862112348999999730248431256643
Q gi|254780327|r 288 LY--SFENVAIVHLINNALKSHTLFLRNRDYIVNRDEVVIIDEFTGRMMPGRRYSDGQHQALEAKERVKIQPENQTLSSI 365 (890)
Q Consensus 288 l~--~~~~~~~~~~i~~al~A~~~~~~d~~Yiv~~~~v~ivDe~TGr~~~gr~~~~GlhQaieaKe~v~i~~e~~t~a~i 365 (890)
T Consensus 401 ~~~~~~~~~~~~h~i~~aL~A~~l~~~d~dYiV~dg~V~IVDe~TGR~m~gRr~sdGLHQAiEAKE~v~i~~e~~t~AsI 480 (983)
T PRK12900 401 VYRLFAERSERLHNISQLLKAYSLFEKDDEYVVQNGQVMIVDEFTGRILPGRRYSDGLHQAIEAKENVKIEGETQTMATI 480 (983)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEC
T ss_conf 11113100168999999999999885587079978947998778887477881540589999997299879998120340
Q ss_pred HHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 48899830320000134305489999987199679807899622430203422377889999999999997409907986
Q gi|254780327|r 366 TFQNYFLKYRKLSGMTGTASTEAEELANIYNLDVIEVPTNVPVIRIDEHDEIYRTSEEKYAAIIAEIIDSHKKGQPVLVG 445 (890)
Q Consensus 366 t~qn~Fr~y~kl~GmTGTa~te~~Ef~~iY~l~v~~iPtnkp~~r~d~~d~v~~t~~~k~~ai~~~i~~~~~~grpvLvg 445 (890)
T Consensus 481 T~Qn~Fr~Y~kLsGMTGTA~te~~Ef~~iY~l~Vv~IPTn~P~~R~D~~D~vy~t~~~K~~Aii~ei~~~~~~gqPVLVG 560 (983)
T PRK12900 481 TIQNFFRLYKKLAGMTGTAETEASEFFEIYKLDVVVIPTNRPIVRKDMDDLVYKTRREKYNAIVLKVEELQKKGQPVLVG 560 (983)
T ss_pred CHHHHHHHCCHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 18899853746204756748899999998688669848999840012655041899999999999999997479988998
Q ss_pred EHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 11167899999999860771022310224778888875305587048875024466554027675578886511357553
Q gi|254780327|r 446 TPSIEKSEYLASQLRKHKFTKFQILNALYHEKEAYIISQAGIPGAVTIATNMAGRGTDIQLGGNVAMRIEHELANISDEE 525 (890)
Q Consensus 446 t~sve~Se~ls~~L~~~~~~~h~vLNAk~~~~Ea~Iia~AG~~g~vTiATNMAGRGTDI~Lgg~~~~~~~~~~~~~~~~~ 525 (890)
T Consensus 561 T~SVe~SE~lS~~L~~~gI-~h~VLNAk~h~~EA~IIa~AG~~GaVTIATNMAGRGTDIkLg~----------------- 622 (983)
T PRK12900 561 TASVEVSETLSRMLRAKRI-EHNVLNAKQNEREAEIVAEAGQKGAVTIATNMAGRGTDIKLGE----------------- 622 (983)
T ss_pred ECCHHHHHHHHHHHHHCCC-CHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCC-----------------
T ss_conf 3878999999999998599-5565167847889999993699997798243678985825483-----------------
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHCCHHHHHHHH
Q ss_conf 00899999999877643334540762799826775323355420543456686723899842301454202101344542
Q gi|254780327|r 526 IRNKRIKMIQEEVQSLKEKAIVAGGLYVISTERHESRRIDNQLRGRSGRQGDPGRSKFYLSLQDDLMRIFGSPRMESFLR 605 (890)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~v~~~GGL~VigterhesrRid~QlrGRagRQGdpG~s~f~~SleD~l~r~Fgsdri~~lm~ 605 (890)
T Consensus 623 ------------------~V~elGGL~VIgTErheSrRIDnQLrGRaGRQGDPG~S~F~lSLeDdLmr~Fg~dri~~~~~ 684 (983)
T PRK12900 623 ------------------GVRELGGLFILGSERHESRRIDRQLRGRAGRQGDPGESVFYVSLEDELMRLFGSDRVISVMD 684 (983)
T ss_pred ------------------CHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHCCHHHHHHHH
T ss_conf ------------------44653880775114230256787860432457999853999964179999754278999998
Q ss_pred HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 10025666214567999999999873334679999998677776588889999998864011018999987777788776
Q gi|254780327|r 606 KIGLKEGEAIIHPWINKAIERAQQKVEARNFETRKNLLKYDDVLNEQRKIIFEQRLEIIDTENILEIIADMRHDTLHNIV 685 (890)
Q Consensus 606 klg~~egepIes~~itksIE~AQKkVE~~NFdiRK~LLeYDdVlN~QRevIY~qR~~IL~sedi~e~I~~miedvI~diV 685 (890)
T Consensus 685 ~lg~~e~~~i~~~~i~~~ie~AQkkvE~~nfdiRK~ll~yDdVmN~QRkVIY~qR~~IL~~edi~e~I~~miedvi~~~V 764 (983)
T PRK12900 685 KLGHEEGDVIEHSMITKSIERAQKKVEEQNFAIRKRLLEYDDVLNQQREVIYTRRRNGLIKERLTSDIFDLLRDYCDTVV 764 (983)
T ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 42799998167666999999999999863579998887886779999899999999998405068999999999999999
Q ss_pred HHHCCCCCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 53127888822148788999888872998883103234389989999999999999999999851989899999999999
Q gi|254780327|r 686 EKCIPNNSYPEKWDIKKLETEIYEIFGIHFPVLEWRNDNGIDHTEMSKRIFAKADKIAEDQENSFGTEKMQALGRHILLH 765 (890)
Q Consensus 686 ~~~~~~~~~~eeWDle~L~~~L~~~f~~~~~~~e~~~~~~ld~eeI~e~I~~~~~~~y~~K~e~lg~e~~~elER~IlLq 765 (890)
T Consensus 765 ~~y------~e~wd~e~L~~~l~~~~~~~~~~~~-~~~e~~~~eei~e~i~e~~~e~y~~Ke~~ig~e~~relER~IlLq 837 (983)
T PRK12900 765 KKF------HKSLDPEGLEEQVLRELSVEFKPDR-ETFEREGIEGMADKLYEAALEFYRRKEEAVPEDIMRQIEKYAVLS 837 (983)
T ss_pred HHH------HHHCCHHHHHHHHHHHCCCCCCCCH-HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 975------4305899999999986587778786-766238999999999999999999999853999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH---
Q ss_conf 99965799999999887753355540106248999999999999999999999999852315751067787643332---
Q gi|254780327|r 766 TLDSFWREHMARLEHSRSIIGFRGYAQRDPLQEYKSEAFGFFNTLLTHLRKDVVSQIARIEPNNINNQELNNSLPYI--- 842 (890)
Q Consensus 766 ~ID~~WkEHL~~MD~LRqgIgLRaYGQKDPL~EYKkEAF~LFeeMl~~Ik~evV~~L~riqi~~~e~qe~~~~~~~~--- 842 (890)
T Consensus 838 ~ID~~WkeHL~~MD~LRegIgLRaYgQKDPL~EYKkEaf~LFe~Ml~~Ik~evv~~Lfrv~i~~~e~~~~~~~~~~~~~~ 917 (983)
T PRK12900 838 VIDQKWREHLREIDSLREGINLRAYGQKDPLLEYKQEAFRLFVELLREIELETLSLAFKLFPVTPEEAEEIEERQRKSAV 917 (983)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998776530203369999999999999999999999999999871402571267778887677666
Q ss_pred ------H--CCC----------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf ------1--001----------1211111244567876679986899989989997311245889
Q gi|254780327|r 843 ------A--END----------HGPVIQKENELDTPNVCKTSKIKRNHPCPCGSGKKYKHCHGSY 889 (890)
Q Consensus 843 ------~--~~~----------~~~~~~~~~~~~~~~~~~~~KVGRNDPCPCGSGKKYK~ChGan 889 (890)
T Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~KVGRNDPCPCGSGKKYK~CHGk~ 982 (983)
T PRK12900 918 RQEKLVAQHEEAESAYEAAADEETQPAAEIEENKQQPVVAEKKPGRNDLCPCGSGKKYKNCCGQQ 982 (983)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 55543321001111001244444565555433567876578998999999888995565279999