HHsearch alignment for GI: 254780327 and conserved domain: PRK13104
>PRK13104 secA preprotein translocase subunit SecA; Reviewed.
Probab=100.00 E-value=0 Score=2716.11 Aligned_cols=881 Identities=51% Similarity=0.831 Sum_probs=831.3
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 89999998718855735899999999998422888838989999999999999973998889669999999999576608
Q gi|254780327|r 4 HLAKLASKLLIPSNERRLRPYYAKVIAINELEKEISHLSDDSLANKTSEFKERINNGETLDDLLVPAFAVVREVARRTLG 83 (890)
Q Consensus 4 ~~~~~~~k~~~~~~~~~l~~~~~~~~~in~~e~~~~~lsd~~l~~~t~~~~~~~~~g~~l~~~l~eafa~~rea~~R~lg 83 (890)
T Consensus 1 m~~~~~~k~fg~~n~r~lk~~~~~v~~In~le~~~~~lsD~eL~~kT~efk~rl~~getld~il~eAFA~vrEa~~R~lg 80 (896)
T PRK13104 1 MLSTLIKKMFGSRNERTLRRMEKSVMAINAFEPKMQALSNEELAGKTQEFKERFNNGESLDELLAEAFATVREVSLRTLG 80 (896)
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 96789999769920888999999999999858999838999999999999999977997788869999999999898638
Q ss_pred CCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCC
Q ss_conf 76844799999997079450673368068999999999860799956974692773875999999998829436763598
Q gi|254780327|r 84 MRPFDVQLLGGMILHKGCVAEMKTGEGKTLAAVLPVYLNALSGKGVHVVTVNDYLARRDSNTMSAIYKFLGLSTGVVFHD 163 (890)
Q Consensus 84 ~~~~dvQl~g~~~l~~g~iaem~TGEGKTL~a~l~~~lnal~g~~vhvvTvNdyLA~RDa~~m~~~y~~lglsvg~~~~~ 163 (890)
T Consensus 81 ~r~~dvQl~gg~~lh~g~iaEM~TGEGKTL~atlp~ylnal~g~gvhvvTvNdYLA~RDae~m~~~y~~lGltvg~i~~~ 160 (896)
T PRK13104 81 LRHFDVQLIGGMVLHEGNIAEMRTGEGKTLVATLPAYLNAISGRGVHIVTVNDYLAKRDSQWMKPIYEFLGLTVGVIYPD 160 (896)
T ss_pred CCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCC
T ss_conf 97647999989998458514651788559999999999875599719972653544644999999999819767341899
Q ss_pred CCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCHHHHCCCCCCEEEEECCHHHHHHHHCCCEEECCCCCCCHHHHHHHH
Q ss_conf 79889974025635334434321112214320000221026674388612035456430242152388765247878743
Q gi|254780327|r 164 LSDDKRRAAYACDITYITNNELGFDYLRDNMQYRRVDMVQRGHNFAIVDEVDSIFIDEARTPLIISGPVEDHSDLYRTID 243 (890)
Q Consensus 164 ~~~~~r~~~Y~~di~Y~t~~e~gfDyLrDnm~~~~~~~v~r~~~~aivDEvDSiLiDeartPLiIsg~~~~~~~~~~~~~ 243 (890)
T Consensus 161 ~~~~~r~~aY~~DitY~Tn~e~gFDyLrDnm~~~~~~~vqr~~~~aivDEvDSiLiDEArtPLiisg~~~~~~~~y~~~~ 240 (896)
T PRK13104 161 MSHKEKQEAYKADIVYGTNNEYGFDYLRDNMAFSLTDKVQRELNFAIVDEVDSILIDEARTPLIISGAAEDSSELYIKIN 240 (896)
T ss_pred CCHHHHHHHHCCCEEEECCCCCCCCCCCCCHHCCHHHHCCCCCCEEEEECHHHHHHHCCCCCEEECCCCCCCHHHHHHHH
T ss_conf 99799999714993796786541523572111384762566776478742235432135687475278876448999999
Q ss_pred HHHHHHCC-------CCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 45443013-------5514414444322014679999863101688452-475760013389999999999998526973
Q gi|254780327|r 244 SIIIQLHP-------SDYEIDEKQRTVHFSEKGTERIEELLHGENLLKS-GGLYSFENVAIVHLINNALKSHTLFLRNRD 315 (890)
Q Consensus 244 ~~~~~l~~-------~dy~id~~~~~v~lt~~G~~~~e~~~~~~~~~~~-~~l~~~~~~~~~~~i~~al~A~~~~~~d~~ 315 (890)
T Consensus 241 ~~~~~l~~~~~~~~~~dy~~de~~~~v~lt~~G~~~~e~~l~~~~~~~~~~~ly~~~~~~~~~~v~~al~A~~l~~~d~~ 320 (896)
T PRK13104 241 SLIPQLKKQEEEGDEGDYTIDEKQKQAHLTDAGHLHIEELLTKAKLLDPGESLYHASNIMLMHHVNAALKAHAMFHRDID 320 (896)
T ss_pred HHHHHHHHHHHCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999986221167777798747764568354679999997452135776653551345899878899999999966984
Q ss_pred EEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHH
Q ss_conf 16108937897554585156862112348999999730248431256643488998303200001343054899999871
Q gi|254780327|r 316 YIVNRDEVVIIDEFTGRMMPGRRYSDGQHQALEAKERVKIQPENQTLSSITFQNYFLKYRKLSGMTGTASTEAEELANIY 395 (890)
Q Consensus 316 Yiv~~~~v~ivDe~TGr~~~gr~~~~GlhQaieaKe~v~i~~e~~t~a~it~qn~Fr~y~kl~GmTGTa~te~~Ef~~iY 395 (890)
T Consensus 321 YiV~d~~v~ivDe~TGR~m~grr~s~GlhQaiEaKE~v~i~~e~~t~a~iT~Qn~Fr~y~klsGMTGTa~te~~Ef~~iY 400 (896)
T PRK13104 321 YIVKDNQVVIVDEHTGRTMPGRRWSEGLHQAVEAKEGVPIQNENQTLASITFQNFFRMYNKLSGMTGTADTEAYEFQQIY 400 (896)
T ss_pred EEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCHHCCCCCCCHHHHHHHHHHH
T ss_conf 89988949998688887788981653689999987288778887224777599988545042267567676899999986
Q ss_pred CCCEEEECCCCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 99679807899622430203422377889999999999997409907986111678999999998607710223102247
Q gi|254780327|r 396 NLDVIEVPTNVPVIRIDEHDEIYRTSEEKYAAIIAEIIDSHKKGQPVLVGTPSIEKSEYLASQLRKHKFTKFQILNALYH 475 (890)
Q Consensus 396 ~l~v~~iPtnkp~~r~d~~d~v~~t~~~k~~ai~~~i~~~~~~grpvLvgt~sve~Se~ls~~L~~~~~~~h~vLNAk~~ 475 (890)
T Consensus 401 ~l~Vv~IPtn~p~~R~d~~d~vy~t~~~K~~Av~~ei~~~~~~gqPVLvGT~sve~SE~ls~~L~~~gi-~h~VLNAk~~ 479 (896)
T PRK13104 401 NLEVVVIPTNRSMIRKDEADLVYLTQADKFQAIIEDVRECGVRRQPVLVGTVSIEASEFLSQLLKKENI-KHQVLNAKFH 479 (896)
T ss_pred CCCEEECCCCCCCEEECCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCC-CHHHHCCCCH
T ss_conf 887698589999612379986972899999999999999997599789934857989999999998699-2465267874
Q ss_pred HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 78888875305587048875024466554027675578886511357553008999999998776433345407627998
Q gi|254780327|r 476 EKEAYIISQAGIPGAVTIATNMAGRGTDIQLGGNVAMRIEHELANISDEEIRNKRIKMIQEEVQSLKEKAIVAGGLYVIS 555 (890)
Q Consensus 476 ~~Ea~Iia~AG~~g~vTiATNMAGRGTDI~Lgg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~GGL~Vig 555 (890)
T Consensus 480 ~~EA~Iia~AG~~gaVTIATNMAGRGTDI~LGg~~~~~~~~----~~-~~~~~~~~e~~~~~~~~~~~~v~~~GGL~Vig 554 (896)
T PRK13104 480 EKEAQIIAEAGRPGAVTIATNMAGRGTDIVLGGSLAADLAN----LP-ADASEQEKEAVKKEWQKRHDEVIAAGGLRIIG 554 (896)
T ss_pred HHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHC----CC-CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 78999998338999689716556888582178751244430----56-55116679999999998533442058728986
Q ss_pred ECCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 26775323355420543456686723899842301454202101344542100256662145679999999998733346
Q gi|254780327|r 556 TERHESRRIDNQLRGRSGRQGDPGRSKFYLSLQDDLMRIFGSPRMESFLRKIGLKEGEAIIHPWINKAIERAQQKVEARN 635 (890)
Q Consensus 556 terhesrRid~QlrGRagRQGdpG~s~f~~SleD~l~r~Fgsdri~~lm~klg~~egepIes~~itksIE~AQKkVE~~N 635 (890)
T Consensus 555 terhesrRiD~QLrGRaGRQGDPG~s~F~lSleDdLmr~Fg~~~i~~~m~~lg~~e~e~Ie~~~itk~Ie~AQkkVE~~n 634 (896)
T PRK13104 555 SERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDNLMRIFASERVASMMRRLGMQPGEPIEHSLVTRAIENAQRKLEGHH 634 (896)
T ss_pred ECCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 04331246777860532456899863266533379998746166999999717888763333668999999999999987
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCC
Q ss_conf 79999998677776588889999998864011018999987777788776531278888221487889998888729988
Q gi|254780327|r 636 FETRKNLLKYDDVLNEQRKIIFEQRLEIIDTENILEIIADMRHDTLHNIVEKCIPNNSYPEKWDIKKLETEIYEIFGIHF 715 (890)
Q Consensus 636 FdiRK~LLeYDdVlN~QRevIY~qR~~IL~sedi~e~I~~miedvI~diV~~~~~~~~~~eeWDle~L~~~L~~~f~~~~ 715 (890)
T Consensus 635 fdiRK~lLeYDdVmn~QR~vIY~qR~~IL~~~dl~eiI~~m~edvid~lV~~y~~~~s~ee~wd~e~L~~~L~~~f~i~~ 714 (896)
T PRK13104 635 FDVRKQLLDYDNVANDQRQVIYTQRSSIMAMTDTQEVVEMMREEVMDSLVDTYIPPQSLEDQWDPQALSDVLSDEFKIKA 714 (896)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999998888999999999999999986157489999999999999999983686444323049999999998847477
Q ss_pred CHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 8310323-438998999999999999999999985198989999999999999965799999999887753355540106
Q gi|254780327|r 716 PVLEWRN-DNGIDHTEMSKRIFAKADKIAEDQENSFGTEKMQALGRHILLHTLDSFWREHMARLEHSRSIIGFRGYAQRD 794 (890)
Q Consensus 716 ~~~e~~~-~~~ld~eeI~e~I~~~~~~~y~~K~e~lg~e~~~elER~IlLq~ID~~WkEHL~~MD~LRqgIgLRaYGQKD 794 (890)
T Consensus 715 ~i~~~id~~~~l~~e~ike~i~~~a~e~y~eK~~~ig~e~~~elER~IlLq~ID~~WkEHL~~MD~LRegIgLR~YgQKD 794 (896)
T PRK13104 715 PVPDWIDKDHSIQPEQIKEKILALAIEHYDEKVRKVGRPVISQFEKSIILQTLDNHWREHLAAMDQLRQGIHLRGYAQKD 794 (896)
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 62777753216899999999999999999999998699999999999999999899999999999998786662052379
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH---HC---CCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 248999999999999999999999999852315751067787643332---10---011211111244567876679986
Q gi|254780327|r 795 PLQEYKSEAFGFFNTLLTHLRKDVVSQIARIEPNNINNQELNNSLPYI---AE---NDHGPVIQKENELDTPNVCKTSKI 868 (890)
Q Consensus 795 PL~EYKkEAF~LFeeMl~~Ik~evV~~L~riqi~~~e~qe~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~KV 868 (890)
T Consensus 795 PL~EYK~EAF~LFe~Ml~~Ir~dvv~~L~~veI~~~e~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~KV 874 (896)
T PRK13104 795 PKQEYKKEAFSLFTMMLDNLKYEVIRILSSVEIQTEEDAHVVEEQRRADQIRKMNLMHESLSENDEASETQTFRRQEKKI 874 (896)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 89999999999999999999999999977446067651567887777777654310012345565444567776678999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8999899899973112458899
Q gi|254780327|r 869 KRNHPCPCGSGKKYKHCHGSYL 890 (890)
Q Consensus 869 GRNDPCPCGSGKKYK~ChGanl 890 (890)
T Consensus 875 GRNDPCPCGSGKKYK~CHGaL~ 896 (896)
T PRK13104 875 GRNDPCPCGSGKKYKACHGSLV 896 (896)
T ss_pred CCCCCCCCCCCCHHHHCCCCCC
T ss_conf 9999998889966761799859