HHsearch alignment for GI: 254780327 and conserved domain: pfam04851
>pfam04851 ResIII Type III restriction enzyme, res subunit.
Probab=96.18 E-value=0.017 Score=39.79 Aligned_cols=60 Identities=25% Similarity=0.330 Sum_probs=44.9
Q ss_pred CCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHH
Q ss_conf 087684479999999707945067336806899999999986079995697469277387
Q gi|254780327|r 82 LGMRPFDVQLLGGMILHKGCVAEMKTGEGKTLAAVLPVYLNALSGKGVHVVTVNDYLARR 141 (890)
Q Consensus 82 lg~~~~dvQl~g~~~l~~g~iaem~TGEGKTL~a~l~~~lnal~g~~vhvvTvNdyLA~R 141 (890)
T Consensus 2 ~~LR~yQ~~a~~~~~~~~~~~i~~pTGsGKT~~~~~~i~~~~~~~~~~lvlvp~~~L~~Q 61 (103)
T pfam04851 2 LELRPYQIEAIRNLLEKKRGLIVMATGSGKTLTAAKLIARLLKGKKKVLFLVPRKDLLEQ 61 (103)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH
T ss_conf 987299999999999639869995899987999999999998469929999082999999