HHsearch alignment for GI: 254780327 and conserved domain: pfam07516
>pfam07516 SecA_SW SecA Wing and Scaffold domain. SecA protein binds to the plasma membrane where it interacts with proOmpA to support translocation of proOmpA through the membrane. SecA protein achieves this translocation, in association with SecY protein, in an ATP dependent manner. This family is composed of two C-terminal alpha helical subdomains: the wing and scaffold subdomains.
Probab=100.00 E-value=0 Score=458.78 Aligned_cols=211 Identities=42% Similarity=0.776 Sum_probs=201.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 21456799999999987333467999999867777658888999999886401101899998777778877653127888
Q gi|254780327|r 614 AIIHPWINKAIERAQQKVEARNFETRKNLLKYDDVLNEQRKIIFEQRLEIIDTENILEIIADMRHDTLHNIVEKCIPNNS 693 (890)
Q Consensus 614 pIes~~itksIE~AQKkVE~~NFdiRK~LLeYDdVlN~QRevIY~qR~~IL~sedi~e~I~~miedvI~diV~~~~~~~~ 693 (890)
T Consensus 1 pIe~~~itk~ie~AQkkVE~~nfdiRK~lleyDdVln~QR~~IY~~R~~iL~~~~~~~~i~~~~~~~i~~~i~~~~~~~~ 80 (211)
T pfam07516 1 PIESKMVTKAIENAQKKVEGRNFDIRKNLLEYDDVLNQQRKVIYAQRNEILEGEDLKEIILEMIEDVIDDIVEEYAPEKS 80 (211)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 98708888999999999986067999868888887999999999989999857413568999999999999997578666
Q ss_pred CHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 82214878899988887299888310323438998999999999999999999985198989999999999999965799
Q gi|254780327|r 694 YPEKWDIKKLETEIYEIFGIHFPVLEWRNDNGIDHTEMSKRIFAKADKIAEDQENSFGTEKMQALGRHILLHTLDSFWRE 773 (890)
Q Consensus 694 ~~eeWDle~L~~~L~~~f~~~~~~~e~~~~~~ld~eeI~e~I~~~~~~~y~~K~e~lg~e~~~elER~IlLq~ID~~WkE 773 (890)
T Consensus 81 -~~~~~~~~l~~~i~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~~~~~y~~k~~~~~~~~~~~~er~i~L~~iD~~W~~ 158 (211)
T pfam07516 81 -PEEWDLEGLEEALRSLLGLDLDIDE-LELEGLTAEELKEKLIEAAKEAYEEKEAELGEELMREIERRIMLQVIDELWKE 158 (211)
T ss_pred -CCCCCHHHHHHHHHHHHCCCCCCCH-HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -2211599999999998288898007-76637999999999999999999999987499999999999999998488999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999988775335554010624899999999999999999999999985231
Q gi|254780327|r 774 HMARLEHSRSIIGFRGYAQRDPLQEYKSEAFGFFNTLLTHLRKDVVSQIARIE 826 (890)
Q Consensus 774 HL~~MD~LRqgIgLRaYGQKDPL~EYKkEAF~LFeeMl~~Ik~evV~~L~riq 826 (890)
T Consensus 159 HL~~Md~LR~~I~LR~ygQkdPl~EYk~Eaf~lF~~m~~~i~~~iv~~l~~~~ 211 (211)
T pfam07516 159 HLDAMDHLREGIGLRGYGQKDPLVEYKREAFELFEEMLEDIKEEVVRYLFRVQ 211 (211)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999766867468859999999999999999999999999988379