RPSBLAST alignment for GI: 254780327 and conserved domain: TIGR00963
>gnl|CDD|162135 TIGR00963, secA, preprotein translocase, SecA subunit. The proteins SecA-F and SecY, not all of which are necessary, comprise the standard prokaryotic protein translocation apparatus. Other, specialized translocation systems also exist but are not as broadly distributed. This model describes SecA, an essential member of the apparatus. Length = 745
Score = 1048 bits (2711), Expect = 0.0
Identities = 411/789 (52%), Positives = 538/789 (68%), Gaps = 49/789 (6%)
Query: 31 INELEKEISHLSDDSLANKTSEFKERIN-NGETLDDLLVPAFAVVREVARRTLGMRPFDV 89
IN LE++ LSD+ L KT+EFK+R+ GETLDDLL AFAVVRE ++R LGMRPFDV
Sbjct: 1 INALEEDYEKLSDEELRAKTNEFKDRLQKQGETLDDLLPEAFAVVREASKRVLGMRPFDV 60
Query: 90 QLLGGMILHKGCVAEMKTGEGKTLAAVLPVYLNALSGKGVHVVTVNDYLARRDSNTMSAI 149
QL+GG+ LHKG +AEMKTGEGKTL A LP YLNAL+GKGVHVVTVNDYLA+RD+ M +
Sbjct: 61 QLIGGIALHKGKIAEMKTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAEWMGQV 120
Query: 150 YKFLGLSTGVVFHDLSDDKRRAAYACDITYITNNELGFDYLRDNMQYRRVDMVQRGHNFA 209
Y+FLGLS G++ +S ++RR AYACDITY TNNELGFDYLRDNM + + + VQR +FA
Sbjct: 121 YRFLGLSVGLILSGMSPEERREAYACDITYGTNNELGFDYLRDNMAHSKEEKVQRPFHFA 180
Query: 210 IVDEVDSIFIDEARTPLIISGPVEDHSDLYRTIDSIIIQLHPS-DYEIDEKQRTVHFSEK 268
I+DEVDSI IDEARTPLIISGP E ++LY + L YE+DEK R V +EK
Sbjct: 181 IIDEVDSILIDEARTPLIISGPAEKSTELYLQANRFAKALEKEVHYEVDEKNRAVLLTEK 240
Query: 269 GTERIEELLHGENLLKSGGLYSFENVAIVHLINNALKSHTLFLRNRDYIVNRDEVVIIDE 328
G ++ E+LL +N LY EN ++H INNALK+ LF ++ DYIV EVVI+DE
Sbjct: 241 GIKKAEDLLGVDN------LYDLENSPLIHYINNALKAKELFEKDVDYIVRDGEVVIVDE 294
Query: 329 FTGRMMPGRRYSDGQHQALEAKERVKIQPENQTLSSITFQNYFLKYRKLSGMTGTASTEA 388
FTGR+M GRR+SDG HQA+EAKE V+IQ ENQTL++IT+QN+F Y KLSGMTGTA TE
Sbjct: 295 FTGRIMEGRRWSDGLHQAIEAKEGVEIQNENQTLATITYQNFFRLYEKLSGMTGTAKTEE 354
Query: 389 EELANIYNLDVIEVPTNVPVIRIDEHDEIYRTSEEKYAAIIAEIIDSHKKGQPVLVGTPS 448
EE IYNL+V+ VPTN PVIR D D +Y+T EEK+ A++ EI + H KGQPVLVGT S
Sbjct: 355 EEFEKIYNLEVVVVPTNRPVIRKDLSDLVYKTEEEKWKAVVDEIKERHAKGQPVLVGTTS 414
Query: 449 IEKSEYLASQLRKHKFTKFQILNALYHEKEAYIISQAGIPGAVTIATNMAGRGTDIQLGG 508
+EKSE L++ L++ +LNA HE+EA II+QAG GAVTIATNMAGRGTDI+L
Sbjct: 415 VEKSELLSNLLKERGI-PHNVLNAKNHEREAEIIAQAGRKGAVTIATNMAGRGTDIKL-- 471
Query: 509 NVAMRIEHELANISDEEIRNKRIKMIQEEVQSLKEKAIVAGGLYVISTERHESRRIDNQL 568
E+ GGLYVI TERHESRRIDNQL
Sbjct: 472 ----------------------------------EEVKELGGLYVIGTERHESRRIDNQL 497
Query: 569 RGRSGRQGDPGRSKFYLSLQDDLMRIFGSPRMESFLRKIGLKEGEAIIHPWINKAIERAQ 628
RGRSGRQGDPG S+F+LSL+D+LMRIFG R+E +R++GL++ E I + +A+E AQ
Sbjct: 498 RGRSGRQGDPGSSRFFLSLEDNLMRIFGGDRLEGLMRRLGLEDDEPIESKMVTRALESAQ 557
Query: 629 QKVEARNFETRKNLLKYDDVLNEQRKIIFEQRLEIIDTENILEIIADMRHDTLHNIVEKC 688
++VEARNF+ RK LL+YDDVLN+QR++I+ +R I+++E++ E+I M TL IV+
Sbjct: 558 KRVEARNFDIRKQLLEYDDVLNKQREVIYAERRRILESEDLSELILQMLESTLDEIVDAY 617
Query: 689 IPNNSYPEKWDIKKLETEIYEIFGIHFPVLEWRNDNGIDHTEMSKRIFAKADKIAEDQEN 748
I E+WD++ L ++ +F + L + + ++ + + K +++E
Sbjct: 618 INEQKPSEEWDLEGLIEKLKTLF-LLDGDLTPEDLENLTSEDLKELLLEKIRAAYDEKEA 676
Query: 749 SFGTEK---MQALGRHILLHTLDSFWREHMARLEHSRSIIGFRGYAQRDPLQEYKSEAFG 805
+E+ M+ R++LL ++D W+EH+ ++ R IG R Y Q+DPL EYK+E F
Sbjct: 677 ELESERPGLMREFERYVLLQSIDRKWKEHLDAMDLLREGIGLRSYGQKDPLIEYKNEGFN 736
Query: 806 FFNTLLTHL 814
F +L +
Sbjct: 737 LFLEMLEDI 745