RPSBLAST alignment for GI: 254780327 and conserved domain: cd00268

>gnl|CDD|28928 cd00268, DEADc, DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif (motif II). This domain contains the ATP- binding region.. Length = 203

 Score = 40.5 bits (95), Expect = 0.002
 Identities = 31/154 (20%), Positives = 55/154 (35%), Gaps = 22/154 (14%)

Query: 85  RPFDVQLLGGMILHKG--CVAEMKTGEGKTLAAVLPV-----YLNALSGKGVHVVTVNDY 137
           +P  +Q      L  G   + + +TG GKT A ++P+           G    ++     
Sbjct: 21  KPTPIQARAIPPLLSGRDVIGQAQTGSGKTAAFLIPILEKLDPSPKKDGPQALILAPTRE 80

Query: 138 LARRDSNTMSAIYKFLGLSTGVVF--HDLSDDKRRAAYACDITYITNNELGFDYL-RDNM 194
           LA + +     + K   L   V++    +    R+      I   T   L  D L R  +
Sbjct: 81  LALQIAEVARKLGKHTNLKVVVIYGGTSIDKQIRKLKRGPHIVVATPGRL-LDLLERGKL 139

Query: 195 QYRRVDMVQRGHNFAIVDEVDSI----FIDEART 224
              +V  +       ++DE D +    F D+ R 
Sbjct: 140 DLSKVKYL-------VLDEADRMLDMGFEDQIRE 166