HHsearch alignment for GI: 254780328 and conserved domain: PRK04308

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.

Probab=95.35  E-value=0.024  Score=33.70  Aligned_cols=36  Identities=28%  Similarity=0.324  Sum_probs=31.4

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf             9644799968788277999999998798899992687
Q gi|254780328|r    1 MENKNVLVVGGAGYIGAHTCRVLYERGFLPIVLDNLS   37 (333)
Q Consensus         1 m~~kkIlItG~tGfiGs~l~~~L~~~g~~v~~~d~~~   37 (333)
T Consensus         3 ~~~k~v~viGlG~-sG~s~a~~L~~~G~~v~~~D~~~   38 (445)
T PRK04308          3 FQNKKILVAGLGG-TGISMIAYLRKNGAEVAAYDAEL   38 (445)
T ss_pred             CCCCEEEEEEECH-HHHHHHHHHHHCCCEEEEEECCC
T ss_conf             7999899999899-99999999997899199997999