HHsearch alignment for GI: 254780328 and conserved domain: PRK05600
>PRK05600 thiamine biosynthesis protein ThiF; Validated.
Probab=96.03 E-value=0.0093 Score=36.28 Aligned_cols=118 Identities=14% Similarity=0.145 Sum_probs=57.5
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCCCHHHHCCCCEEEEECCCH--HHHHHHHHHCCCCEEEECHH
Q ss_conf 9644799968788277999999998798-89999268767521302386798426899--99999987569889995714
Q gi|254780328|r 1 MENKNVLVVGGAGYIGAHTCRVLYERGF-LPIVLDNLSSGHAEFVLWGPLEQVDICDY--TNLRAVFAKYQPASVMHFAG 77 (333)
Q Consensus 1 m~~kkIlItG~tGfiGs~l~~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~Di~d~--~~l~~~~~~~~~d~ViHlAa 77 (333)
T Consensus 39 L~~a~VlvvG~GG-LG~p~~~yLaaaGvG~i~ivD~D~Ve~sNL~RQil~~~~diG~~K~~~A~~~l~~lNp~i~i~~~~ 117 (370)
T PRK05600 39 LHNARVLVIGAGG-LGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR 117 (370)
T ss_pred HHCCCEEEECCCH-HHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCCEEEHH
T ss_conf 8619789988875-789999999982897489873898260210555426976669757999999999878997157356
Q ss_pred HCCCCCCCCCCEEEEEECCCCCCC------CCCCCCCCCCCCCCCCCCC
Q ss_conf 401122343100123301233322------2112222222222223333
Q gi|254780328|r 78 LTNISESVKNPSLFYEINIKGSFN------LIATAIESNVRRFIFSSTC 120 (333)
Q Consensus 78 ~~~~~~~~~~p~~~~~~Nv~gt~~------ll~~~~~~~~~~~i~~SS~ 120 (333)
T Consensus 118 ~~l~~~n~~~li~~~DvVvD~tDNf~tRylindaC~~~~~-PlV~ga~~ 165 (370)
T PRK05600 118 ERLTAENAVELLNGVDLVLDGSDSFATKFLVADAAEITGT-PLVWGTVL 165 (370)
T ss_pred HHCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCC-CEEEEEEC
T ss_conf 6469999998763687899778887999999999998499-76984532